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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S165.g10010.01.t

Possible name(s)

SLCO1A2; SLCO1B7; SLCO5A1

Gene model

Harore.CG.MTP2014.S165.g10010

Location

S165 [197,207 / 198,473]

Sequences

Amino acid sequence

Length: 184

>Harore.CG.MTP2014.S165.g10010.01.p
MHDNGTHIEPITYTGCDCSGLNITATQGICERDCTQTLILFMVCLFFIIMTTGVALIPAV
ISTLRCVEYNERAFAIGLQTVFYRTLGFVPAPIYYRSAIDRACLIWVGSTDACEGGFDVC
QVYDADLFRYIFVGLFFGLKILSLILMSITWYFIRKKSMQRNRKRIKGKAKYRKGNRKKD
KFET

Nucleotide sequence

Length: 555

>Harore.CG.MTP2014.S165.g10010.01.t
ATGCATGATAATGGAACGCATATCGAACCGATCACATACACAGGCTGCGATTGCAGCGGA
CTCAACATAACAGCAACACAGGGGATTTGTGAAAGGGATTGCACACAGACATTAATTCTA
TTCATGGTGTGCTTGTTCTTTATCATCATGACGACGGGAGTGGCATTGATTCCAGCAGTT
ATAAGTACATTACGATGTGTCGAATATAATGAAAGAGCATTTGCAATTGGATTGCAGACG
GTATTTTACAGAACACTTGGCTTTGTTCCGGCCCCAATCTACTATCGTTCAGCAATCGAT
AGAGCTTGTCTTATATGGGTTGGATCAACAGATGCATGTGAAGGTGGATTTGATGTATGT
CAGGTATACGATGCAGACCTCTTCCGTTACATTTTCGTCGGTCTCTTTTTCGGGCTGAAA
ATTCTTTCGTTGATTCTCATGTCCATCACATGGTATTTCATTCGAAAAAAAAGCATGCAA
CGTAATCGCAAAAGAATCAAAGGAAAAGCGAAGTATCGAAAGGGAAACCGAAAAAAAGAT
AAATTTGAGACATAG

InterProScan

Pfam
OATP (IPR004156) - T[11-128] 1.5E-31
PANTHER
OATP (IPR004156) - T[12-167] 1.8E-40
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[35-101] 4.58E-6 - T[136-163] 4.58E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO5A1_HUMAN 41.096 % 105 8.29E-27
SO1C1_HUMAN 28.962 % 85.9 7.03E-20
SO1A2_HUMAN 31.217 % 82.8 9.56E-19