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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  3. Transcript 'Moocci.CG.ELv1_2.S47...' > 
  4. Transcript 'Moocul.CG.ELv1_2.S10...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S162.g02417.01.t

Possible name(s)

SMYD1; SMYD2; SMYD3

Gene model

Harore.CG.MTP2014.S162.g02417

Location

S162 [48,848 / 53,991]

Sequences

Amino acid sequence

Length: 537

>Harore.CG.MTP2014.S162.g02417.01.p
MAGCIYGDNSVIDGLHTTGQRELPRYRIISISSLSIITTLPSCLKVLSKLLKSSAKDAVS
VRPRVFTLVSLYFLPVRTNTSSSTSMLIKYVINVYVSPKRAEHNPPSLLKCGSCKFARYC
NKECQRAAWTAHKPECAGVRRVFPGKASDPTRLVARLFWKKERLQKGEEKHDFPVTVEDL
ESHIEERTPEEKEKLDEHVFSFGDYVTYEAMPDSDDVICQWFGSIDCNAISLNDPRGLMV
VGVGIFLEMSLINHDCNPNCVAVNNGIKVEVSLSACEVNAENLEIFCFTFDVLPFKLRAL
RPIKPGDELCISYVDPIDNVSNRQEKLKQQYYFDCQCDTCENGSESEHLKSALLNDTIKK
IKPESEDYIIKMSLDALKRMESSKKKQQFERLYNQGVGCLKQQDCVIADTHVLKLAVLNQ
LIEVMAYLRRPDESCEYAQRVADAYEKIFPAVHPTLGMFFMRLGVLQWQVQKSEAFTTLS
RAAGIISVSKLAMSVSFCQHSNTRRSMIVAHPSQCLQIKLADLDAGSFFKIVQSCYR

Nucleotide sequence

Length: 1,987

>Harore.CG.MTP2014.S162.g02417.01.t
ATGGCTGGTTGTATCTATGGGGATAACAGTGTGATAGATGGCTTACACACAACAGGACAA
CGAGAACTTCCTAGATATAGAATAATTTCAATCTCGTCTTTATCCATCATCACAACATTA
CCATCATGTCTGAAAGTTCTTTCGAAATTGTTGAAGTCATCGGCAAAGGACGCGGTCTCT
GTTCGGCCAAGAGTTTTCACACTGGTCAGCTTATATTTTCTTCCCGTCCGTACGAACACA
TCGTCTTCAACGAGCATGCTGATAAAGTATGTCATCAATGTCTACGTCAGCCCAAAGCGC
GCTGAACACAACCCTCCATCGTTACTGAAATGTGGATCGTGCAAATTTGCTCGTTATTGT
AATAAAGAATGTCAGCGAGCTGCTTGGACGGCGCACAAACCAGAATGCGCCGGAGTAAGA
AGAGTATTCCCGGGGAAAGCATCAGATCCGACGAGACTTGTCGCAAGATTGTTCTGGAAG
AAAGAGCGATTGCAGAAAGGCGAAGAAAAACATGATTTTCCTGTCACAGTGGAAGACCTT
GAATCTCACATTGAAGAACGAACGCCGGAGGAAAAAGAGAAATTAGATGAACATGTTTTC
AGTTTTGGCGATTACGTGACTTACGAAGCGATGCCGGATAGCGATGATGTCATATGTCAG
TGGTTTGGATCGATAGACTGCAATGCTATCAGTTTGAATGATCCGCGTGGACTGATGGTC
GTCGGCGTCGGCATTTTTCTCGAAATGTCGTTGATCAATCACGATTGTAATCCAAACTGT
GTTGCTGTTAACAATGGGATCAAAGTGGAGGTAAGTCTGTCTGCTTGTGAAGTGAACGCT
GAAAATCTGGAAATATTCTGCTTTACATTCGATGTTCTTCCTTTTAAGCTCCGCGCTCTT
CGTCCGATCAAACCTGGAGATGAGCTTTGCATATCGTACGTTGATCCGATTGATAACGTT
TCGAACAGACAAGAAAAATTGAAACAACAGTACTATTTTGATTGCCAATGTGACACTTGT
GAAAATGGCAGCGAATCGGAACACCTGAAATCTGCTCTGCTTAATGACACAATAAAGAAG
ATAAAACCAGAAAGTGAAGATTACATCATAAAGATGTCCCTGGATGCATTGAAACGAATG
GAAAGCAGTAAAAAGAAACAGCAATTTGAGAGATTATACAACCAAGGAGTCGGATGTCTT
AAACAGCAAGATTGTGTGATTGCTGATACTCATGTACTGAAGCTTGCAGTTCTCAACCAA
CTGATCGAAGTGATGGCTTATCTTCGTCGACCAGATGAATCTTGTGAGTATGCTCAACGT
GTTGCAGATGCTTACGAAAAAATCTTTCCTGCAGTTCATCCAACACTTGGGATGTTCTTC
ATGAGGTTGGGCGTCCTCCAGTGGCAAGTTCAGAAGAGCGAAGCGTTCACAACACTTAGC
AGAGCTGCTGGTATTATATCTGTAAGTAAACTAGCAATGTCTGTCAGCTTTTGTCAGCAC
AGTAATACTCGTAGAAGTATGATTGTGGCCCATCCTAGCCAGTGCCTTCAAATTAAATTA
GCAGATCTTGACGCCGGTAGCTTTTTCAAAATAGTCCAGTCCTGTTATCGCTAGAAAACA
CACGGTGACAATCATCCTCTCTTCCTCGACATCATCGATTTGATGCGACAATGTCATCAC
GAATCACAGATGAGCAAAGAAGTTCAAAGCAAAATGAGAAAAGTCAGAAAAGAAGCAAAT
ATGGGAATCACTGGACTGTACAATTCGAAGTAAGATCTGGAGTGTTGAAATTGACCAAAT
TGCAAAGGCAAATGTTTTGTTTAAGAATTCTGGAACTTTTTGAGTCAACCCAAGAATAAG
AACATACTTGTTGTGATGGTTTTGATTTGTGAGAATTTGAATTTGACAGATGACTAATTA
ATTTTGATGTTGATCCTGAATATATTCCATACAACTTATGTACGTCCCTCACTGACAAAT
AAAAAAA

InterProScan

ProSiteProfiles
Znf_MYND (IPR002893) - T[94-136] 10.289
Pfam
Znf_MYND (IPR002893) - T[107-136] 1.3E-9
ProSiteProfiles
SET_dom (IPR001214) - T[135-314] 11.48
Pfam
SET_dom (IPR001214) - T[157-313] 2.2E-8
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[319-506] 1.7E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMYD3_HUMAN 26.289 % 145 2.63E-38
SMYD1_HUMAN 34.884 % 224 6.38E-67
SMYD2_HUMAN 24.49 % 132 1.06E-33