- Transcript 'Haaura.CG.MTP2014.S1...' >
- Clone 'cicl026a24' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S161.g13188.01.t
Possible name(s)
HACE1; HUWE1; UBR5
Gene model
Location
S161 [0 / 17,027]
Amino acid sequence
Length: 1,408
>Harore.CG.MTP2014.S161.g13188.01.p
HNILRTLDYYLEEDNEDDDLDDDEGDEDNVDEDKDSYTLRRASEEEATTATDVDVSEASS
QEDNDADEDRDAQEEEIESQSEWIELPLERAPTRQQRSRAAQTPHSMRWAMGPSRNSLGR
QGSGPSSSRPAGPGTSTGSGNLIYIDPTSLRRGSSLGVNSSVTPSSSSGPDRSKSPAGMS
GYSMATTTAQLARAFSICIRELSGLLVMVELREELPSYAYVAANEANELKQFVDESLADT
WSWLITVIDSTEAQLRYGQVLSLASSSDHGGHPLYKGPGKGISKTSTQPNVPEIYRHRAI
ASVGGRSLSFMNPLRLTREATVDTNAARQDFLSYILSLMRAHSNEHSDLLPVIDVSALRH
VAYVLDAYIFFLRETSSSDNPVSNKKKKMLWAVNSDPEELDRKISLNIGYDNTDDEEEEE
DNGIIIFDEPEPQALPDDLSEVLVDNIISSSLKKAQEEFDPVNNMAQPLKSFFRRSNSMT
FLGCTDPDPFSEPMVTALPLADKPHLLQPNARKEELFGRPRQHARSENSDGISDPNLPST
GMGLVKRKIPVKFANIEKKISGKRKEKNASKSSHKSDSHQKESSQSENEEQSMKMDTTEK
EPAAEGGNTKVAETEDALKKDEKVVKESSVAPANIPVIVKNAKPSTDEGKHVQKSPPSVD
SVLGRSRLTLELFTRVFLDDVGAEPKSVLQELGGFEVREQKFRKEMEKFRNCQSVDLQLN
VERDPRRLVLQTFKQLNQHYRRRSSPSSSSSQPLAVHRVKVIFKDEPGEGSGVARSFYTA
LCEALLSSEKLPPLDSILVPSGSSSSRGASAIHNRLVSRLRKREQERERERAGGRPGSSM
KVNLRSYFLARYSQRSSTSTSSTMTTATSRRTTPTSVMPSNLPQMSTLALPFHKRSTSGA
SSRPSDHSDWANDKNAIGERLLPRVAAINSNWSRKITGMLLSLPISELLLLLSSENMLKI
KVADAVRRLLQVGYHGEEENESTVNEGTPQAGPVGETSSSSSSGGQRARMSVLASSKSSG
ERQNVSSTAEPAGKQKKYGRNQDSDESDHGSEDEENGARLRSTFPLFYQPGKRGFYSPAA
GPTPKTDPKKATASLSSRKGSQVGYEARLSAFRNVGRILGLCLLQNELCPLPLNRHVLKA
LLGRKINWLDFAFFDPTMYESMRFMLAECAQSEDENVLKDLDFTFTADILPEEGGPTEVE
LIPYGATFNVSKSNVHDFVRKYTTYKMITCCHKYIEQMRSGLFDVLPANALDDLTAEDLR
LLANGCGRVNVLMLISYTSFNDESGKAGSNTEKLTEFKRWFWTVVEQMPLSARQELLYFW
TGSPALPASEDGFQPMPTVTIRPPDDQHLPTANTCISRLYVPLYSSKLILKKKLNIAIQT
KNFGFVKQRKFCSVLLSIRFYFCLIEAA
Nucleotide sequence
Length: 4,227
>Harore.CG.MTP2014.S161.g13188.01.t
CACAATATTCTGAGAACGCTCGATTACTATCTCGAAGAAGACAACGAGGATGATGATTTA
GATGACGATGAGGGAGATGAGGACAATGTAGATGAAGATAAAGACAGTTATACTTTGAGA
AGAGCTTCAGAGGAAGAAGCTACAACTGCAACAGATGTGGACGTATCAGAGGCCAGCAGT
CAGGAAGACAATGATGCCGATGAAGATCGAGATGCACAGGAAGAAGAAATAGAATCTCAA
TCTGAATGGATTGAGTTGCCACTCGAGAGGGCTCCTACTAGACAGCAGAGATCCAGAGCA
GCACAGACTCCTCATTCAATGAGGTGGGCAATGGGACCTTCACGAAATAGCTTGGGCAGA
CAAGGCTCCGGGCCTTCCAGCTCACGCCCTGCAGGACCAGGTACAAGTACTGGCTCTGGA
AATCTCATTTATATTGATCCCACTTCGTTACGAAGAGGAAGTTCTCTTGGAGTGAACTCT
TCCGTGACGCCAAGCAGCAGCAGCGGTCCCGACAGAAGCAAGTCGCCTGCCGGCATGTCG
GGATATTCGATGGCAACCACGACAGCTCAACTCGCGAGGGCGTTTTCCATCTGCATTCGG
GAATTGTCCGGTCTGTTGGTCATGGTAGAATTGCGAGAAGAACTACCTTCGTATGCTTAT
GTAGCAGCTAATGAGGCCAATGAGTTAAAACAATTTGTTGATGAAAGCCTGGCTGACACT
TGGTCCTGGCTGATCACTGTGATCGATTCGACCGAAGCTCAGCTCCGGTACGGTCAGGTT
TTGTCACTGGCTAGCAGTTCTGACCATGGTGGTCATCCTTTGTACAAAGGACCGGGCAAG
GGAATAAGCAAAACAAGCACTCAACCAAATGTACCGGAAATATATCGCCATCGTGCGATC
GCTTCGGTTGGCGGAAGGTCTCTGTCTTTCATGAATCCCCTAAGATTGACGAGAGAAGCC
ACCGTTGACACGAATGCAGCAAGACAGGACTTTTTATCCTACATTTTGTCGTTAATGCGA
GCACACAGCAATGAGCATTCTGACTTGCTGCCGGTAATCGATGTGTCTGCTCTCCGTCAT
GTTGCCTACGTGCTCGACGCATACATATTCTTTCTAAGAGAAACTTCTAGTTCTGATAAT
CCCGTTTCAAATAAGAAGAAAAAAATGCTGTGGGCTGTCAATTCAGATCCAGAGGAATTA
GATCGCAAGATTTCGCTTAATATCGGATACGACAATACGGACGATGAGGAGGAGGAGGAA
GATAATGGAATTATTATTTTCGACGAACCAGAACCACAAGCTCTGCCCGATGATCTAAGT
GAAGTTCTTGTGGACAATATAATATCATCGTCGCTTAAGAAGGCTCAAGAAGAATTCGAT
CCTGTAAATAATATGGCCCAGCCTTTAAAATCGTTCTTCCGCAGATCGAACTCCATGACG
TTTTTGGGTTGCACTGATCCCGATCCTTTCTCGGAACCTATGGTTACCGCTCTTCCCCTC
GCAGACAAGCCTCACCTGCTCCAGCCGAACGCTAGGAAAGAAGAACTGTTTGGACGTCCA
CGTCAACATGCCAGATCTGAAAACAGTGATGGTATCTCTGATCCTAATTTACCTTCTACT
GGAATGGGCCTGGTTAAAAGAAAGATTCCAGTCAAATTCGCAAACATAGAAAAAAAAATA
TCAGGAAAAAGGAAGGAAAAGAATGCTTCTAAATCATCCCATAAATCTGACAGCCATCAG
AAGGAGTCGTCTCAATCAGAAAATGAAGAGCAATCCATGAAAATGGACACAACAGAAAAA
GAACCTGCTGCGGAAGGTGGAAATACTAAAGTTGCAGAAACTGAAGATGCTCTAAAGAAA
GATGAGAAAGTTGTTAAGGAAAGCAGCGTTGCTCCCGCAAATATTCCTGTGATTGTTAAA
AACGCGAAGCCGTCTACAGATGAGGGAAAACATGTCCAGAAATCGCCACCTTCAGTGGAC
TCTGTGCTAGGAAGATCCCGGCTCACGCTTGAGCTGTTCACTCGGGTTTTTCTGGATGAC
GTAGGTGCTGAGCCGAAGTCTGTTCTCCAGGAGCTGGGAGGATTTGAGGTTCGCGAACAG
AAATTCCGCAAAGAAATGGAGAAGTTTCGCAATTGTCAGTCTGTCGACCTGCAGCTCAAC
GTCGAAAGAGATCCTCGACGACTGGTACTCCAGACTTTCAAGCAATTGAATCAGCATTAC
AGAAGAAGATCCTCTCCATCTTCCTCCTCTTCTCAACCTTTGGCTGTCCACAGAGTGAAG
GTCATCTTCAAGGATGAACCTGGCGAAGGTAGCGGCGTGGCACGTAGCTTTTATACTGCT
TTGTGCGAAGCGTTGTTATCTTCAGAAAAACTTCCTCCGCTCGACAGCATTTTAGTTCCA
TCCGGATCCTCCTCATCTAGGGGTGCTTCTGCAATTCATAACAGATTGGTTTCCCGTCTT
CGTAAGCGAGAACAGGAGAGAGAAAGAGAGAGGGCAGGTGGAAGACCAGGATCTTCGATG
AAGGTCAATCTGCGTTCATATTTCTTGGCAAGATACTCGCAGCGCTCTTCAACATCAACG
TCTTCTACCATGACCACGGCAACATCCAGGAGAACCACTCCCACTTCGGTCATGCCTAGC
AACTTGCCCCAGATGTCGACGCTTGCATTGCCGTTCCACAAACGATCCACTTCTGGAGCA
TCTTCGAGACCGAGCGATCATTCTGACTGGGCCAATGACAAAAATGCTATCGGTGAAAGA
CTTTTGCCTAGAGTCGCTGCCATAAACTCCAACTGGTCAAGAAAAATCACAGGAATGCTC
TTAAGTCTTCCCATCTCCGAACTGCTTCTGTTATTAAGCAGCGAAAACATGCTAAAAATC
AAAGTAGCAGATGCAGTACGTCGCTTGTTACAAGTTGGCTACCATGGCGAAGAAGAAAAT
GAATCCACAGTGAACGAAGGTACCCCACAAGCAGGCCCCGTCGGGGAAACAAGCAGCAGT
TCCTCATCTGGTGGCCAGAGAGCTAGGATGTCTGTGCTTGCCTCAAGCAAATCATCTGGT
GAAAGACAGAACGTATCATCCACGGCAGAGCCCGCAGGTAAACAAAAGAAATATGGGAGA
AATCAAGATTCAGATGAGTCTGATCATGGAAGTGAAGATGAAGAGAATGGCGCCAGATTG
AGATCTACGTTCCCACTTTTTTACCAGCCTGGCAAGCGTGGATTTTATTCACCCGCTGCA
GGTCCAACACCCAAAACTGACCCCAAGAAAGCGACGGCGTCTCTCTCCTCTAGAAAAGGC
TCTCAAGTCGGCTACGAAGCACGGTTGAGCGCTTTCAGGAACGTAGGTCGGATACTCGGT
CTCTGTCTTCTTCAGAATGAGCTATGCCCTTTGCCTTTGAACCGTCATGTTCTAAAGGCT
CTATTAGGGAGAAAGATCAATTGGCTAGATTTTGCCTTCTTTGACCCTACCATGTACGAA
AGCATGAGATTTATGCTGGCGGAATGCGCGCAATCGGAAGATGAAAACGTTCTCAAAGAC
CTGGATTTCACTTTCACTGCAGATATTCTGCCTGAAGAAGGAGGTCCAACGGAGGTCGAA
CTCATTCCGTACGGGGCTACCTTCAACGTTTCCAAGAGTAATGTTCACGATTTTGTTCGA
AAATACACAACTTACAAGATGATAACGTGTTGTCATAAATACATCGAACAAATGCGTTCT
GGATTATTCGATGTCCTTCCCGCGAATGCTCTCGACGATCTGACTGCCGAAGATCTTCGT
TTGCTCGCTAACGGTTGCGGGCGTGTCAATGTGCTTATGCTTATCAGCTACACTTCTTTT
AATGACGAGAGTGGCAAAGCAGGTTCCAATACAGAGAAGCTCACAGAGTTCAAACGTTGG
TTCTGGACAGTGGTCGAGCAAATGCCATTGTCAGCTCGTCAGGAGCTGTTATACTTCTGG
ACAGGCTCGCCGGCATTACCCGCGAGCGAGGACGGTTTTCAACCCATGCCGACCGTGACC
ATACGACCACCAGACGATCAACATTTGCCCACTGCCAACACGTGCATATCTCGGCTCTAC
GTTCCGCTATATTCGTCCAAATTGATTTTAAAGAAAAAACTGAACATCGCCATTCAGACG
AAAAATTTCGGCTTCGTAAAGCAAAGAAAATTTTGCTCAGTGCTTCTTTCTATCCGTTTT
TATTTTTGCCTGATTGAGGCGGCATGA
| SUPERFAMILY |
PABP-dom (IPR036053) - T[876-967] 9.55E-16 |
| ProSiteProfiles |
PABP_HYD (IPR002004) - T[897-974] 11.058 |
| SMART |
PABP_HYD (IPR002004) - T[909-972] 2.3E-11 |
| Pfam |
PABP_HYD (IPR002004) - T[911-967] 5.7E-13 |
| ProSiteProfiles |
HECT_dom (IPR000569) - T[1053-1386] 57.932 |
| SMART |
HECT_dom (IPR000569) - T[1054-1386] 2.3E-82 |
| Pfam |
HECT_dom (IPR000569) - T[1096-1385] 9.5E-58 |
| SUPERFAMILY |
Hect_E3_ubiquitin_ligase (IPR035983) - T[1107-1379] 1.31E-57 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HUWE1_HUMAN | 24.781 % | 103 | 9.22E-22 |
| HACE1_HUMAN | 28.421 % | 106 | 5.47E-23 |
| UBR5_HUMAN | 38.187 % | 811 | 0 |