- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S160.g14532.01.t
Possible name(s)
SLC6A11; SLC6A12; SLC6A13
Gene model
Location
S160 [182,280 / 186,631]
Amino acid sequence
Length: 616
>Harore.CG.MTP2014.S160.g14532.01.p
MGDNEKDNAQSDSFLDKCSGNSSQDFVRRGISTEERETWSNKAQSFCTVLGAIIGMGNLW
RFPYICYMNGGGAFLIPYLLCVAFMGFPLFFLETALGQLTKQGAIGAWDVAPIMRGVGIG
SAVLVTYSNIYFIMVIAWGFFYFFHSFTLHDLPFTTCTNWWNTPNCRPYSYSFNLSSISN
EGNINATSNTTTNITPSFPSLTQENRTLPITEFWKRYVLRKSNSLEEYGTLDNWILILCL
IVAWIVCYLCIIQGIKSAGKVALFTATIPYLLLGVILVRGCMLKGAIDGVYFYLKPNITK
LAEPKVWIQAGGQVCYSYAIGFAAIITMGSFNKFHKDCYKHSILLVGSCASTSFLTGFAV
FSILGNLAFVTGRNVSEVVDSGPGLVFQTFPTVLSLLPWPQFWTALFFFMLILIGLDSQF
ACVECIIVMIIDHWPAAFSSKQKRVLLRSVTCIVLFIFGLMFTPPGGVYLFELFNNYAVS
GIAVLWIAMMEAVAIAYVYGIDKFYDDVETMIGYRPSIFVKVCLLYITPLITASIMVSYM
VQYTPLTIDGYKYPSWADALGWLLCMSSFLCVPGVFIYTLYKGKGTFSERWKAGTKPKHV
DHSLTDAKKNKDKLIL
Nucleotide sequence
Length: 2,037
>Harore.CG.MTP2014.S160.g14532.01.t
AGTGTACAGTGTTTGATAATTCTACTCTGCAAGTATGGGAGATAATGAAAAAGATAATGC
GCAGTCGGATTCTTTTTTAGACAAATGCTCGGGAAATTCTTCGCAGGATTTTGTACGGAG
AGGGATCAGTACAGAGGAGAGGGAAACATGGAGTAACAAAGCGCAATCCTTTTGTACTGT
TCTAGGGGCAATTATAGGAATGGGCAATTTGTGGAGGTTTCCATATATTTGCTATATGAA
CGGCGGAGGTGCTTTTCTAATTCCGTATTTACTATGCGTTGCCTTCATGGGATTTCCATT
ATTCTTCCTGGAAACTGCTTTGGGGCAACTGACCAAACAAGGTGCGATAGGTGCTTGGGA
CGTGGCGCCCATCATGCGGGGTGTTGGCATTGGCAGTGCGGTTCTTGTTACTTATTCCAA
TATATATTTCATTATGGTCATCGCTTGGGGATTCTTCTACTTCTTTCATTCGTTCACACT
TCATGATCTACCTTTCACAACCTGCACAAACTGGTGGAACACTCCAAACTGTCGACCTTA
CAGTTATTCTTTCAATCTGTCTTCAATCAGTAATGAGGGAAACATCAATGCAACTTCAAA
CACAACCACTAATATTACACCAAGTTTTCCAAGTTTAACTCAAGAAAATAGAACATTACC
AATTACTGAATTTTGGAAGCGCTATGTCTTACGGAAGTCAAATAGCCTAGAAGAGTATGG
TACATTGGATAATTGGATTCTCATTCTCTGCCTCATTGTTGCTTGGATTGTCTGTTATCT
TTGTATCATTCAGGGAATTAAATCTGCTGGAAAAGTTGCACTTTTCACGGCCACAATACC
TTACCTCCTACTGGGTGTGATTTTGGTCAGGGGTTGTATGTTGAAAGGTGCAATTGATGG
AGTGTACTTTTACCTCAAGCCGAATATAACTAAACTTGCAGAACCAAAGGTTTGGATCCA
AGCTGGCGGCCAAGTTTGTTATTCCTATGCAATTGGATTTGCAGCAATTATAACTATGGG
GAGCTTCAATAAATTTCATAAGGATTGCTACAAACACAGCATATTGCTGGTGGGAAGCTG
TGCATCTACATCATTCCTCACTGGTTTTGCTGTGTTTAGCATACTAGGAAATTTAGCTTT
TGTCACAGGCAGAAATGTCTCAGAAGTGGTTGACTCAGGTCCCGGACTAGTTTTTCAAAC
GTTCCCAACAGTATTATCTCTGTTACCATGGCCTCAGTTTTGGACTGCTCTATTTTTCTT
TATGCTCATCTTAATAGGACTTGATTCTCAGTTTGCCTGTGTTGAATGTATCATTGTGAT
GATTATTGATCATTGGCCAGCTGCGTTCAGCAGCAAGCAAAAGAGAGTTCTCCTACGAAG
TGTTACTTGCATTGTGTTGTTCATTTTCGGCCTCATGTTTACTCCTCCGGGAGGTGTTTA
TTTATTTGAGTTGTTCAATAATTATGCTGTAAGTGGAATAGCTGTACTATGGATTGCTAT
GATGGAAGCAGTAGCTATTGCGTATGTTTACGGCATTGATAAATTTTACGATGATGTCGA
AACTATGATCGGTTACAGACCTTCAATATTCGTGAAGGTCTGCTTGCTATACATAACACC
TCTGATAACTGCAAGTATTATGGTATCCTACATGGTTCAATACACACCATTAACAATTGA
TGGATACAAGTATCCTAGCTGGGCAGATGCCCTCGGTTGGTTGCTTTGTATGTCATCCTT
TCTCTGTGTTCCTGGAGTATTCATCTATACTCTTTATAAAGGAAAAGGAACATTTAGTGA
GCGATGGAAAGCTGGCACTAAACCAAAACATGTCGACCATTCTTTAACTGATGCAAAGAA
AAATAAGGACAAATTAATTTTATAATATTCACTGCATGCCGCTGATACAATTTACTTGTA
TTGAGGCCTGTGCTACGCAATTACAGCAATTACAATTTAGAGTGATAAAATTTTTATATT
TTTCAAGTTCATTATATCTATTGTGTAGACATTTGTATTTGAAATAGGGAATTAAAT
| PANTHER |
Na/ntran_symport (IPR000175) - T[32-604] 9.9E-198 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[35-585] 90.127 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[36-166] 6.54E-151 - T[208-581] 6.54E-151 |
| Pfam |
Na/ntran_symport (IPR000175) - T[36-581] 6.3E-178 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[44-65] 4.8E-59 - T[73-92] 4.8E-59 - T[116-142] 4.8E-59 - T[261-278] 4.8E-59 - T[343-363] 4.8E-59 - T[397-416] 4.8E-59 - T[481-501] 4.8E-59 - T[521-541] 4.8E-59 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[60-74] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A12_HUMAN | 43.373 % | 493 | 1.76E-168 |
| S6A13_HUMAN | 44.815 % | 513 | 2.88E-176 |
| S6A11_HUMAN | 40.992 % | 488 | 4.67E-166 |
