- Transcript 'KH2012:KH.C1.11.v1.A...' >
- EST 'AHC0AAA232YC12_RM1' >
- Transcript 'KH2012:KH.C6.94.v2.A...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S159.g10650.01.t
Possible name(s)
ANK1; ANK2; TRPA1
Gene model
Location
S159 [133,355 / 153,415]
Amino acid sequence
Length: 1,268
>Harore.CG.MTP2014.S159.g10650.01.p
MEEDKSNSVSSARNSPMLDRSRLLTPVENPQKSGSDSLESSSASKSLVLRVETPENVRLS
ALKQMDRNSEPNESEMTSFSNTGAVMDEEKRGPGRIDSLYLNEIQAPKSDLDVVDQSVHQ
IARDGDVKLMKLALKGLSASQIHKRLAAKDAERHTPLHYAARYNHFDMCKFLVELGANIH
ARGEDDMTALHLVAKNKPRMRGSTVAELAGIVEAEIQRAENDTVEILRFFLASGALVNQK
DFYDFTPLHYSCLRGNTFIVQKLLECQGIAVEAMDKAQMTPLHIASVYGHDEIARMLIKI
GCNIRCKDEENGTPLHLAAAEGNLEIVKLLLEGALDKHGADYIKQMLSDVDNDSNTPLHL
AVDSGHAGVTSYLISKCKSLGSHNLLNARRSNNETPIHLAASHGHLEIVRLLVNNSARIN
IRDATHSTPLILASKFNQFNVVEYLLQCGAKIDIREIDDFTALLIAANYGHPETISLLIE
HGADVTAVDKNERTVIHQCAEESRLEALQELLGNEKVKNLMDASDRYGNNALHIAAANGN
FALLKVLLEHGADCGLKNEDEQTPLHLAAIHGRVKVIKELVRHDKTVIHADDENADTALH
LAALAGRIHCVQELVNAGANIGARNVKQWTPLDCCASAGHSKSAVVLLESDSPVDPKDKR
RITPLHLASKAGHSDMVKLLLKWNADVSLRSLDGRNALDFATDSNNQECALAIVESEQWR
EALMNRTKHVATEMLTQTPMRKLIRKMPDVAEAVFRNCLKDNGKHPDHPRYEITFDYEFL
DDEFSCTPWVEQSDVMSEHSIAVSSDVSYEIYDESGSVNREAEPYQSDSQVLMSNHCLSI
MVQSKRETLLRHPLVISLLKYKWNSYGKWIYYLNLLLYTLFMAVLNSYVLTVPPPYAINR
TSTTVNCVLVVDEATDVWGTSCPPRHAFWQPVAKYFIYVLSGFSLLKEVFQILGMKLNYF
FLITNLVELALYILSILLVYDVNEFSAATGIREDWQWQCGAAAVFLSWIGLLLFIQNFPR
FGIYVLMFTDVFKTFVSFFAVFLLFIFAFAFSFHALFQNQFAFEYWWNSIIKTVVMMIGE
FEFDGLFNSERSGTPGEYSIQVFYEPLSYIIFVLFLLIMSIITMNLLVGLAVDDIKDIQD
HAKLEGLAMQVKLALDVEYTMPQFLRRHFLKKYNKLMPNQYRNRNRIVKWFVQNEDLTPE
KISQALNPEKDDLEIVNNKVDNLKFRIQTLRSKIRDMSIRSQTIESMLKAVIGHFKINWS
DDNDDEDS
Nucleotide sequence
Length: 4,815
>Harore.CG.MTP2014.S159.g10650.01.t
ATCCATCCGAAAGTACGGTATATTTATATATACATACTGCTTATACATTAATCATTTTAT
TGATTTTGTCTATTCGTTCTACCCTACACATAAGGTTAAATTGATTCGATATGGATTTGG
TGCTACATAGACATAGAGTTAAATACTGTACTACCTAGAATGGATTTTATTATTCAACTG
CTTCCATAAAATGTCACCAATTTTGCACAGCATCCAACTGTGGGCCCAAGCACTAGAATT
TTGTTTAAAATGGCTGGTATTGAAGGATTTTCTGAGTAAAAATATATATATATGAAAAAT
ATGTAATGTACCATATTTTAACTTGGCTATAAAACTTCACTCTACTGGAATTTTATTTCA
TGTTAGGTGTTCATTATGTAAACCCAACTCTGTGGACAAGAGTCACTCAATATTATGGAG
TGAATATCCAGGCATGATTGCCACCTTGTCATCTTCTTTCTACCATAATCTACTGTACCA
TAATTTAATCATTATTAGAATGACTGTACTTTCCCTACTGTTTTCATGGTTGCCATGACC
AGTAATAACATGTGAATAACTCTATGCTATTGTTATGATTGTGTTCACGATCTCAGCCTT
CTTAATAACAATGACTAAACTTCTTTTAGAAATTAGACTCACCTATTATTTATTCTGAAC
AGAGTGTGGCACGGCCCTATTTCGTGTGTGCAAACATTGTATAATATTAAGACACTTTAT
CTTTTAATTATTATATGGTCACAACGAGTTTGTTTTTCGACAACAAAGTTATGGTAGAAT
AAAAGAGCTTGGCAAACATGGAAGAAGATAAGTCGAACAGTGTGAGCAGTGCACGCAACT
CACCAATGCTTGACCGAAGTCGATTGCTGACACCTGTTGAAAATCCACAGAAATCTGGTT
CTGATTCTCTGGAGTCATCAAGTGCATCTAAATCTTTAGTGTTGAGAGTAGAGACTCCAG
AAAACGTTCGGTTGTCTGCACTGAAACAAATGGATCGGAATAGTGAGCCAAATGAATCGG
AAATGACTTCTTTTTCAAACACTGGTGCAGTCATGGATGAAGAGAAGCGAGGACCAGGCC
GAATCGACTCTCTGTATCTAAACGAAATCCAGGCACCGAAAAGCGACTTGGATGTGGTTG
ATCAATCTGTACACCAGATCGCTAGAGATGGGGACGTAAAACTGATGAAACTCGCCCTGA
AGGGTCTATCGGCTTCGCAAATACACAAAAGACTGGCTGCCAAAGATGCTGAACGACATA
CACCGCTTCACTATGCTGCGAGATATAATCACTTTGATATGTGCAAGTTTCTTGTGGAAC
TTGGTGCCAATATACATGCAAGGGGAGAAGATGACATGACTGCACTTCACTTGGTAGCGA
AGAATAAACCAAGAATGAGAGGATCAACAGTAGCTGAATTGGCGGGTATAGTGGAAGCCG
AGATACAACGTGCTGAAAATGACACCGTTGAGATCCTTCGGTTCTTTCTCGCTTCTGGTG
CCCTCGTCAATCAAAAAGATTTCTATGACTTTACCCCTCTACACTATTCATGCCTACGAG
GGAACACTTTTATCGTGCAGAAGCTCTTGGAATGTCAGGGAATAGCCGTTGAGGCTATGG
ATAAAGCGCAGATGACGCCGCTACATATTGCTTCAGTTTACGGACATGATGAAATTGCAA
GGATGCTTATCAAAATAGGTTGCAATATCAGGTGTAAGGATGAGGAAAATGGTACACCTC
TTCACCTTGCAGCTGCAGAAGGCAATCTAGAGATCGTGAAATTACTTCTTGAAGGGGCGC
TAGATAAACATGGAGCTGATTACATCAAACAAATGCTGAGCGATGTGGATAATGACAGTA
ACACACCTTTGCATCTTGCTGTTGACAGCGGACACGCAGGCGTGACTAGTTATCTCATCT
CGAAATGCAAATCACTTGGAAGCCACAACCTCCTCAACGCGAGACGTTCCAACAATGAGA
CTCCCATTCATCTCGCCGCGAGCCACGGACATCTGGAAATCGTGCGCCTCCTGGTGAATA
ACTCTGCTCGTATAAACATCCGAGACGCCACACATTCCACTCCCCTCATCTTGGCCTCCA
AATTCAACCAATTCAATGTTGTGGAATATCTGTTGCAATGCGGTGCTAAGATTGATATTC
GAGAAATTGACGATTTCACTGCTCTTCTAATCGCTGCGAATTATGGACACCCTGAAACCA
TCTCTCTCTTGATCGAACACGGAGCCGACGTCACGGCGGTCGACAAGAACGAACGCACGG
TTATTCATCAGTGTGCTGAGGAATCAAGGCTAGAAGCTTTGCAGGAGTTGCTAGGAAACG
AGAAAGTGAAGAATTTAATGGATGCTTCCGATCGGTACGGCAATAATGCGTTGCACATAG
CTGCCGCGAATGGAAATTTCGCTTTGTTAAAGGTCCTACTGGAACACGGAGCAGATTGCG
GCTTGAAAAATGAAGACGAACAAACTCCTTTGCATCTTGCTGCGATTCATGGTCGCGTCA
AGGTAATCAAGGAGCTTGTTCGCCATGACAAAACTGTGATCCATGCAGACGATGAAAACG
CGGACACAGCTTTACATTTGGCGGCGCTTGCTGGTAGAATTCATTGTGTTCAGGAGCTGG
TGAATGCTGGTGCAAATATTGGAGCAAGAAATGTGAAGCAATGGACACCGCTTGATTGCT
GCGCATCAGCAGGCCATAGCAAGTCAGCGGTTGTTCTACTGGAATCAGATTCACCAGTCG
ATCCCAAAGATAAACGTCGCATCACTCCATTGCATTTAGCTTCTAAAGCGGGGCACTCCG
ACATGGTAAAGTTGCTTCTGAAATGGAACGCAGACGTTTCTCTCAGATCGCTTGACGGAC
GCAACGCTCTCGATTTTGCAACCGATAGTAACAATCAGGAATGTGCTTTGGCGATTGTTG
AAAGCGAACAGTGGAGAGAGGCTCTAATGAACAGAACAAAACACGTCGCCACAGAAATGT
TAACTCAAACACCCATGCGAAAACTGATAAGGAAGATGCCGGATGTGGCCGAAGCGGTTT
TCCGAAATTGTCTCAAAGACAATGGAAAACATCCTGACCATCCGAGATATGAGATAACCT
TCGACTATGAATTTCTCGACGATGAATTTTCCTGCACGCCTTGGGTTGAACAAAGTGATG
TGATGTCTGAACATAGCATTGCTGTCAGTTCAGATGTCAGCTATGAGATTTATGATGAAT
CAGGCAGTGTGAACAGGGAGGCGGAACCTTACCAAAGTGACAGCCAAGTCTTGATGAGTA
ACCATTGCCTCTCTATTATGGTCCAATCAAAGCGTGAAACTCTTCTTCGCCACCCGCTGG
TCATCAGTCTTCTCAAATATAAGTGGAATTCGTATGGAAAATGGATATACTACTTGAACC
TGTTACTGTACACTCTGTTCATGGCTGTTTTGAATTCATATGTTCTTACTGTGCCTCCAC
CTTATGCTATAAATAGAACATCTACAACAGTCAATTGTGTGTTAGTCGTTGATGAAGCTA
CCGATGTTTGGGGCACGTCATGTCCGCCTCGACATGCGTTCTGGCAGCCAGTTGCCAAAT
ACTTCATATATGTGTTGTCCGGTTTCAGTTTGCTAAAAGAGGTGTTCCAAATTCTGGGCA
TGAAGCTCAACTACTTTTTTCTGATCACCAACCTGGTTGAACTCGCCTTGTATATACTAT
CAATATTGCTTGTCTACGATGTGAATGAATTTTCTGCGGCAACCGGCATTCGTGAGGACT
GGCAATGGCAGTGCGGTGCTGCGGCTGTATTTTTATCCTGGATAGGACTGCTTCTTTTCA
TCCAAAACTTCCCTAGATTCGGAATTTACGTTCTCATGTTCACGGATGTCTTCAAGACCT
TCGTTTCTTTTTTCGCAGTCTTCCTTCTATTCATATTTGCCTTTGCGTTCAGTTTTCACG
CACTTTTTCAAAACCAGTTTGCTTTTGAGTACTGGTGGAATTCTATCATCAAAACTGTTG
TAATGATGATTGGAGAATTTGAGTTTGACGGTCTGTTTAACAGCGAAAGAAGTGGCACAC
CGGGCGAGTACAGCATACAAGTTTTCTATGAACCTCTGTCTTACATCATCTTTGTTCTCT
TCCTACTCATCATGAGCATCATCACCATGAATTTGTTGGTTGGTCTTGCAGTCGATGACA
TTAAAGATATCCAAGATCATGCTAAACTTGAAGGGCTTGCTATGCAAGTGAAACTAGCAC
TGGATGTTGAATATACCATGCCTCAGTTTTTGCGTCGTCATTTTTTGAAGAAGTACAACA
AGCTCATGCCGAACCAGTATCGTAACCGTAACCGAATCGTTAAGTGGTTTGTCCAAAACG
AAGATCTGACTCCTGAAAAGATTTCCCAAGCTCTGAATCCTGAAAAGGATGACCTTGAAA
TCGTAAACAACAAGGTAGACAACCTGAAATTTCGAATTCAGACCCTTCGCTCTAAAATAA
GAGACATGAGCATCAGGTCACAGACGATCGAGTCCATGTTGAAAGCTGTCATTGGTCACT
TCAAAATCAACTGGAGCGACGATAATGATGATGAGGATTCATAACAGGTGAAAGCTTCGG
GTTGTTGGTTGGTGATATTTATATATAAATATGTAAGAAGGGAAGCGATAAAACTGTGGC
TGAGATGGATGCTCATAATAATTTCATTTGAGGATATTCTCGTGTCTTATATATAATAGT
TTATGAGTTCATCATGATTACATATATGCTAGTTGGTACAGTACAGATGTACTTTACAGT
TGTAGATGGTATACC
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[108-212] 6.2E-17 - T[213-381] 1.4E-41 - T[382-518] 2.4E-38 - T[519-723] 8.4E-54 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[118-376] 2.8E-49 - T[387-714] 4.77E-75 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[148-298] 1.21061E-29 - T[238-374] 2.33228E-33 - T[387-512] 8.37692E-35 - T[557-681] 1.29076E-33 - T[655-716] 1.33192E-9 |
| SMART |
Ankyrin_rpt (IPR002110) - T[152-181] 1.2E-6 - T[185-239] 420.0 - T[243-273] 1.6 - T[277-306] 9.3E-4 - T[310-339] 0.021 - T[353-382] 0.031 - T[392-421] 8.8E-7 - T[425-454] 0.013 - T[458-487] 8.8E-5 - T[491-520] 240.0 - T[527-556] 2.7E-5 - T[560-590] 6.2E-4 - T[594-623] 2.5E-4 - T[627-658] 130.0 - T[660-689] 0.0057 - T[693-722] 370.0 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[152-715] 127.846 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[152-184] 13.063 - T[277-309] 11.808 - T[310-342] 12.182 - T[353-385] 9.057 - T[392-424] 14.746 - T[425-457] 10.232 - T[458-490] 12.396 - T[527-559] 13.411 - T[560-592] 10.312 - T[594-626] 11.995 - T[660-692] 12.556 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[219-308] 1.6E-12 - T[389-455] 1.8E-14 - T[463-558] 4.8E-14 - T[565-654] 1.3E-11 |
| PRINTS |
Ankyrin_rpt (IPR002110) - T[393-408] 5.4E-7 - T[474-488] 5.4E-7 |
| Pfam |
Ankyrin_rpt (IPR002110) - T[663-690] 3.4E-4 |
| Pfam |
Ion_trans_dom (IPR005821) - T[896-1142] 2.6E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRPA1_HUMAN | 26.956 % | 346 | 1.34E-100 |
| ANK2_HUMAN | 30.743 % | 216 | 1.7E-56 |
| ANK1_HUMAN | 32.177 % | 224 | 4.25E-59 |