- Molecular Tool 'Etr-MO' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1583.g08349.01.t
Possible name(s)
NPHP3; TTC28
Gene model
Location
S1583 [0 / 3,925]
Amino acid sequence
Length: 558
>Harore.CG.MTP2014.S1583.g08349.01.p
FGRFQDSGSPRQTSSNSSQKSKPKERPSTSWKSDGSQQDMGMKDMKKLKDEVKSFIEIGE
YTQASETLQQLLGCQRDPWTKFETLQELIECKLMCNETCDDEMNDLISICQHLPLSSHDI
RAAADKHVIEDKYIKAYIMLTCASKLYKHDTPPSQAVQDIREGTQLMKHLIDEMAKQSRL
RSIATICLIPSLHEMIKEVQDINNVPSRVKALNEALCYNSTATSHEEVGQFDEAVDLFYL
GIKLMERAFGNDVDRTRVYGALFHNLGNTRCQQNKYAEAVDCYEQSLKVAHTAEDFPNEE
HRHNDIDGTTKSLQSARELAHMGSHAGASFRRQDEAVVYEQSLEVGEEAEDWTNNDRKEK
NLEGTQMSLRNARTRIKKTDNLTTQQSKQLFQQDKLLTDDKAELLKNMRSLFKDDLIPKH
EPLTLEKIDLSDEQLTEEDMDAVTYVVSHCTNLHILDLHNCCLPKTSVRRLEQELQPRVQ
IGMFNIKNNEDLVLDDYKAAAYIVEMCQVENFLWDDHLTEQEKKELSSYMDGQNIPFSDM
EAPGEKEEKHFNAVCKVS
Nucleotide sequence
Length: 1,679
>Harore.CG.MTP2014.S1583.g08349.01.t
ACTTTGGGAGATTCCAAGATTCTGGGTCACCAAGGCAGACTTCTTCTAATTCATCACAGA
AGTCAAAACCCAAAGAACGTCCATCTACTTCATGGAAATCGGATGGAAGTCAGCAAGACA
TGGGTATGAAGGATATGAAAAAACTCAAAGATGAGGTCAAAAGTTTCATTGAAATCGGTG
AATACACACAAGCCAGTGAAACCCTGCAACAACTTCTAGGATGTCAGAGAGATCCGTGGA
CAAAATTCGAAACTCTGCAAGAGTTAATCGAATGCAAATTGATGTGCAATGAAACATGCG
ATGATGAAATGAACGACCTCATTTCAATATGTCAGCACCTTCCGCTTTCGTCACATGACA
TAAGAGCAGCAGCAGATAAACATGTTATTGAAGATAAGTACATCAAGGCATACATCATGC
TCACATGTGCCAGTAAATTGTACAAACACGATACACCGCCAAGTCAAGCAGTGCAAGACA
TAAGAGAAGGAACACAGCTAATGAAACACCTGATTGATGAAATGGCAAAACAAAGCAGGT
TAAGAAGCATTGCAACGATATGCTTAATTCCATCCTTACATGAAATGATAAAGGAGGTTC
AAGATATAAACAATGTGCCAAGTCGAGTTAAGGCATTGAACGAGGCTTTATGCTATAACA
GCACAGCTACAAGCCATGAAGAAGTCGGCCAATTCGATGAAGCTGTCGATCTCTTCTACT
TAGGGATTAAACTCATGGAAAGAGCATTTGGAAATGACGTGGACAGAACTCGGGTTTATG
GCGCACTATTCCATAACCTGGGCAACACAAGATGTCAGCAAAATAAATATGCAGAAGCTG
TGGACTGCTATGAACAAAGTTTAAAAGTGGCACATACTGCTGAAGATTTTCCAAATGAGG
AGCACAGACACAACGACATCGATGGAACAACAAAGAGCCTACAGTCTGCCCGTGAACTTG
CTCACATGGGGTCTCATGCTGGCGCATCCTTCAGGAGACAGGATGAGGCTGTCGTCTATG
AACAATCATTAGAAGTGGGAGAGGAAGCAGAAGATTGGACTAACAACGACCGAAAAGAAA
AAAATCTAGAAGGGACGCAAATGAGTCTACGAAATGCCCGCACCAGGATTAAAAAAACGG
ATAACCTGACAACGCAGCAGAGCAAGCAACTTTTTCAGCAAGACAAGCTGTTAACTGATG
ACAAAGCAGAGCTACTGAAGAACATGAGATCACTCTTCAAGGACGACCTCATCCCTAAAC
ATGAACCACTTACTCTGGAGAAGATTGATCTCAGTGATGAACAATTGACAGAGGAAGACA
TGGATGCTGTTACATATGTCGTATCGCACTGTACTAACTTGCATATACTCGATCTACATA
ACTGCTGTCTTCCAAAGACATCTGTAAGAAGATTGGAACAAGAGCTTCAGCCAAGAGTGC
AGATTGGCATGTTCAATATAAAGAACAATGAGGATCTTGTATTAGACGACTACAAGGCAG
CTGCATACATCGTGGAAATGTGTCAGGTTGAGAACTTTCTGTGGGATGATCATCTTACAG
AGCAAGAGAAAAAAGAACTTTCTAGTTACATGGATGGACAAAATATTCCTTTTTCCGATA
TGGAAGCGCCGGGGGAAAAGGAGGAAAAACATTTCAACGCGGTTTGTAAGGTTTCTTAA
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[57-79] 3.79E-10 - T[209-289] 3.79E-10 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[144-377] 4.8E-13 |
| SMART |
TPR_repeat (IPR019734) - T[215-248] 34.0 - T[260-293] 0.004 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[215-293] 8.621 |
| Pfam |
TPR_repeat (IPR019734) - T[263-290] 9.1E-7 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[397-505] 2.5E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|