Aniseed - Transcript Card

Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S151.g00081.01.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Harore.CG.MTP2014.S151.g00081

Location

S151 [108,752 / 111,833]

Sequences

Amino acid sequence

Length: 355

>Harore.CG.MTP2014.S151.g00081.01.p
MLGKVLQRYAKKTDATANAKAHSQRKVTLIPGDGVGPELMTSVKEVFKSASVPVEFEEFW
VSEVQERAGSDLIESLTESVRRNQVALTGDISSRLSATDGELASRKLDLFANVVKVKSLK
GYKTRHDNLDFVIIREQTEGEYSALEHESVPGVVECLKIITRVKSQRIAKFAFDYATKHG
RKKVTAVHKANIMKLGDGMFLQSCREVATLYPKIEFESMIVDNTCMQLVSNPSQFDVMVM
PNLYGNIIDNLAAGLVGGAGVVPGESYSLDCVVFETGARHPFAQAVGRNIANPTAMLLAS
SQMLRHLNLKSHASLIENAVEEVISQGKVRTSDLGGYSTTTEFTQAVVDCMSATN

Nucleotide sequence

Length: 1,279

>Harore.CG.MTP2014.S151.g00081.01.t
GTCAATTTTGAATTAATTGTAAAAAGTTCTAAGATTTGTGACCATGCTTGGTAAAGTTCT
TCAAAGATATGCCAAAAAAACGGATGCAACTGCTAATGCGAAAGCTCACAGTCAACGCAA
GGTTACACTGATTCCTGGTGATGGAGTTGGTCCTGAGCTCATGACTTCTGTTAAGGAAGT
TTTCAAATCAGCTTCCGTACCAGTTGAATTTGAAGAATTCTGGGTTAGTGAAGTACAAGA
ACGTGCCGGCAGTGATCTCATTGAGAGTTTGACAGAGTCTGTGAGAAGAAATCAAGTAGC
CCTTACCGGTGACATTTCTTCACGATTGAGTGCAACAGATGGTGAACTGGCATCGAGAAA
ACTTGATCTGTTTGCGAATGTTGTCAAAGTGAAGAGCTTGAAGGGATACAAAACTAGACA
TGATAATCTTGACTTTGTAATAATTAGAGAACAAACCGAAGGGGAATACAGTGCCCTCGA
ACATGAGAGCGTACCTGGTGTTGTTGAATGCTTGAAAATCATAACCAGAGTTAAATCACA
ACGTATTGCAAAATTTGCTTTTGACTATGCTACCAAACATGGACGCAAGAAAGTGACTGC
AGTGCACAAAGCAAATATTATGAAGCTGGGCGATGGTATGTTCCTCCAGTCTTGTCGCGA
AGTCGCGACCCTGTATCCTAAAATTGAATTCGAATCAATGATTGTTGATAACACATGCAT
GCAGCTCGTTTCAAATCCTAGTCAATTCGATGTCATGGTAATGCCAAACTTGTATGGAAA
TATTATCGACAATCTCGCAGCAGGACTCGTTGGTGGTGCTGGTGTTGTACCGGGTGAAAG
CTATAGCCTGGACTGCGTAGTTTTTGAAACGGGTGCACGTCATCCATTTGCACAAGCTGT
TGGACGGAACATAGCTAATCCCACTGCGATGCTGCTCGCATCTTCACAAATGTTACGGCA
TTTAAATCTCAAGTCTCATGCAAGTCTTATTGAAAATGCTGTGGAAGAAGTCATCAGTCA
AGGCAAGGTCCGAACTTCAGATCTTGGTGGATATTCAACTACTACCGAGTTCACCCAGGC
TGTTGTTGATTGCATGAGTGCGACGAACTAAATCCCATGAAGGGGAAACAGTTCCTTACT
CAAGAGATATTATATTAGTTTGTTTATTCCTCATACGGTCAGATGTTTTTTTCTTTTTTG
TTTTGCTGCAGTATAGTAACCCGTTTTGTAATTATTTATTTTACACTGTTCCTGCCAGTT
CAATAAACAAATAGACATA

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[24-349] 3.1E-147
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[26-347] 3.3E-71
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[26-347] 8.6E-136
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[242-261] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	54.971 %	362	3.09E-124
IDH3B_HUMAN	72.561 %	481	3.71E-171
IDH3A_HUMAN	44.648 %	291	8.84E-97