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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S14.g11420.01.t

Possible name(s)

EFR3A; EFR3B

Location

S14 [529,556 / 531,977]

Sequences

Amino acid sequence

Length: 806

>Harore.CG.MTP2014.S14.g11420.01.p
MSTCMCCPALRPRYKKLVDNIFPRNNEGGLVRSEMEKLTYYAVSAPEKLDRIGDYIAHRL
TRGISRKRDDSVFIAMEALNQLLLACHAQQINLFVESFLKMVANLLESDNLDFQALGTNS
FVKFSQIEEDTASYHRRYDFFVSKFSAMCHSNLKNTKDRKKIQTHGVRGIHSVVRKAVAD
ELQVNIWQKQHMDKIVPSLLYIMMHEQNQESPGRRESYPHKDTGENLGMIAEDCLRELLS
RASYSNVASALHPALDHLDSHNKWDPVNTFAIKCFKVFMYSVQAQYSHVIVKMILDHLDK
QDVDKGQLKASMLEVLCAVVEIPASSPIGPAVIEVFNQLIRHLEVSVDSKNFEEQDVFQS
TFIATIGTLCDVLPEYQKLEGMVFFVNKAKEIVSDNNLQNLSDLNDEKLEKMLSLVLQNL
TRISQKYNSKNLSGLSSSLLEPLIKVSSNCSPKNRLLTQEVIYRLLIKVKTSEKLEIVNG
VSGAEALNLTVTEATVQDMDFIERKVSVILQWVFESACLPDNTPENYVLLYKCASMICIG
LASPDVVIDVCRVMLALQDVAIHPQAHDMEMDARSKTLLMNMMSSCMCVIAYVSKVSRFV
EYVSGIMKNKRKKYQCLDPGAVLKEPFDKIVALPDKLGDSFIFSTRHIQAALEDTNGYKI
EKLSQPYIPTFPGEAESAQVKRSAIDSESVRIDMVGTTEEQPRFAVGEKITAQMITFDYL
KKKLSEPPPTPSEIAERKREAAEHVMSSTFEKLVSEMQARMPANDIRDIVNSISPLPERD
SIPPFMLPEEYIPGGNNIIFPSICVL

Nucleotide sequence

Length: 2,421

>Harore.CG.MTP2014.S14.g11420.01.t
ATGTCTACTTGTATGTGTTGCCCTGCCTTGCGTCCTCGGTACAAAAAGTTAGTGGACAAT
ATCTTTCCAAGAAACAATGAAGGTGGCCTGGTACGTAGTGAAATGGAAAAACTAACCTAC
TATGCTGTTTCTGCACCAGAAAAACTCGACCGCATTGGAGATTATATTGCCCACAGACTC
ACCCGCGGCATAAGCCGCAAACGCGACGATTCTGTCTTCATTGCCATGGAAGCCCTGAAC
CAGCTGCTGCTTGCCTGTCATGCACAGCAAATCAATCTGTTTGTTGAAAGCTTTCTTAAG
ATGGTAGCCAATTTACTTGAGTCGGATAATTTGGATTTTCAAGCACTCGGCACTAACTCT
TTCGTAAAATTTTCACAAATTGAAGAAGACACTGCGTCATACCACCGGCGTTATGACTTT
TTTGTGTCGAAGTTCAGCGCCATGTGCCACAGCAACCTAAAGAACACAAAGGATAGAAAA
AAAATCCAAACACACGGTGTCCGCGGCATTCACAGTGTCGTACGTAAGGCTGTCGCTGAC
GAGCTGCAGGTCAATATCTGGCAGAAACAGCACATGGATAAAATTGTTCCTTCGTTGCTA
TACATCATGATGCACGAACAAAACCAAGAGAGCCCCGGGAGACGAGAATCTTATCCACAC
AAGGATACGGGAGAGAACCTGGGCATGATAGCAGAAGACTGTTTAAGAGAGCTGTTGTCC
CGAGCATCGTATAGTAACGTAGCTTCTGCCTTACATCCTGCCCTTGATCACCTTGACAGC
CACAATAAATGGGATCCTGTTAACACCTTTGCGATCAAATGTTTCAAGGTTTTCATGTAC
TCCGTCCAAGCTCAATACAGCCATGTAATTGTTAAGATGATTTTAGACCATCTGGATAAG
CAGGATGTCGACAAAGGCCAGTTGAAAGCTAGCATGCTTGAAGTACTTTGTGCTGTTGTA
GAGATCCCCGCTTCATCTCCCATTGGACCAGCTGTTATCGAAGTGTTCAATCAGCTCATC
CGTCATTTAGAGGTTTCAGTGGATAGCAAGAATTTCGAGGAGCAGGACGTATTTCAATCC
ACATTCATTGCAACAATTGGAACATTATGCGACGTTCTTCCGGAATATCAAAAATTGGAA
GGGATGGTTTTCTTTGTCAACAAGGCGAAAGAGATAGTTAGTGATAACAACTTGCAGAAT
CTTTCGGACCTAAACGATGAAAAATTGGAAAAGATGCTCAGCCTCGTTCTTCAAAACCTG
ACTAGAATTTCGCAAAAATACAACAGCAAGAACCTGTCCGGGTTAAGTTCGAGTCTGCTC
GAGCCGCTCATCAAAGTTTCCAGTAATTGTTCGCCAAAAAATCGCCTGCTAACACAAGAA
GTTATTTACCGTTTGCTAATAAAAGTAAAAACTTCCGAGAAGTTGGAAATCGTGAATGGA
GTTTCTGGGGCAGAAGCTCTCAACTTAACAGTTACTGAAGCCACAGTCCAGGACATGGAT
TTTATAGAGAGAAAAGTGTCGGTGATTCTACAGTGGGTTTTTGAAAGTGCGTGTCTCCCT
GACAATACTCCTGAAAATTACGTGCTCCTCTACAAATGTGCTAGCATGATTTGCATCGGC
CTAGCTTCCCCCGATGTAGTCATTGATGTTTGCAGAGTTATGCTGGCTTTGCAAGATGTA
GCAATACATCCACAGGCTCATGATATGGAAATGGACGCCAGGAGCAAAACATTACTTATG
AATATGATGTCATCTTGTATGTGTGTAATCGCTTACGTGTCCAAGGTGTCTCGGTTTGTA
GAATATGTTTCAGGCATTATGAAGAACAAAAGAAAAAAGTATCAATGCTTGGATCCCGGG
GCGGTTTTGAAAGAACCGTTTGACAAGATCGTGGCTCTGCCGGACAAACTAGGAGATTCG
TTTATTTTTTCGACGAGGCACATCCAGGCAGCATTGGAAGATACAAACGGGTACAAAATC
GAAAAACTATCCCAACCTTATATTCCCACTTTCCCCGGAGAAGCTGAAAGCGCCCAAGTG
AAAAGAAGCGCAATAGATTCCGAGTCGGTGCGTATCGACATGGTGGGAACTACGGAAGAA
CAACCTCGGTTCGCTGTGGGAGAAAAAATAACGGCACAAATGATAACTTTTGATTATTTG
AAAAAGAAGCTCTCGGAGCCTCCGCCGACACCCTCCGAAATAGCGGAAAGAAAACGAGAA
GCTGCCGAGCACGTGATGTCTTCGACGTTCGAAAAGCTTGTGTCGGAGATGCAAGCCAGA
ATGCCTGCAAATGATATCAGGGATATTGTAAATTCCATCTCGCCCCTACCAGAGAGAGAT
AGCATCCCTCCATTCATGTTGCCTGAGGAATACATACCTGGTGGAAATAATATCATATTC
CCCTCTATCTGTGTATTGTAA

InterProScan

SUPERFAMILY
ARM-type_fold (IPR016024) - T[45-471] 1.42E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EFR3A_HUMAN 37.725 % 517 2.4E-172
EFR3B_HUMAN 36.014 % 499 2.92E-165