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TRANSCRIPT CARD

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  1. Clone 'cicl014a18'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'Moocci.CG.ELv1_2.S53...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S14.g10279.01.t

Possible name(s)

RRP7A

Location

S14 [457,189 / 458,062]

Sequences

Amino acid sequence

Length: 290

>Harore.CG.MTP2014.S14.g10279.01.p
MARERINKTNMASRMEAPPGFKCLVIKFDKTCKFGHTLFYKPNQTRTEDTSKPKLRTLLV
LNVPPYCNKESLSRIFSLKFGDVENVILQKKITNDATEFVQKPTVKDLSLDDEKYFKSED
VKGFKLAFVIFSDPASVTRAAEYETNEKPCIISTRACPVKVGMGKWIEEYCDSIPDKNLQ
VNIDLYMSKYDTAHTRAEEKEEETKDAPDEEGWIKVSRKGKHPVVPRTEANELKAKSREK
MKRKQKELINVYAYQIRESKREKIAELRRKFEEDKVRIQSMRQSRKFQPF

Nucleotide sequence

Length: 873

>Harore.CG.MTP2014.S14.g10279.01.t
ATGGCGCGCGAGCGCATAAACAAAACAAACATGGCCTCGCGCATGGAAGCTCCACCTGGT
TTCAAATGTTTGGTTATAAAATTCGATAAAACGTGCAAATTTGGGCACACACTTTTCTAT
AAGCCGAACCAAACTCGAACCGAAGATACGTCTAAACCTAAACTCCGTACTTTACTAGTT
TTGAACGTTCCGCCGTACTGCAATAAGGAAAGTTTGAGTCGAATTTTTTCGCTGAAGTTC
GGGGATGTCGAAAACGTTATTTTACAGAAAAAAATTACTAATGACGCTACGGAATTCGTT
CAGAAACCGACGGTGAAGGATTTATCGCTTGATGACGAGAAGTATTTCAAATCTGAGGAC
GTTAAGGGATTCAAATTGGCGTTTGTTATATTTTCGGATCCTGCATCAGTAACCAGAGCA
GCTGAATACGAAACGAATGAGAAACCCTGCATCATTTCTACAAGAGCTTGCCCAGTTAAA
GTGGGAATGGGAAAATGGATCGAGGAATATTGCGATTCGATACCAGACAAAAACCTACAG
GTCAACATCGACCTTTACATGTCTAAATATGACACAGCCCACACCAGGGCAGAAGAGAAG
GAAGAAGAGACAAAAGATGCTCCTGACGAGGAGGGCTGGATCAAGGTGAGCAGGAAAGGA
AAACATCCAGTTGTGCCGAGGACAGAAGCGAATGAACTTAAGGCAAAATCACGGGAAAAA
ATGAAAAGGAAACAAAAAGAACTTATTAACGTGTATGCGTATCAGATTAGAGAGTCGAAG
CGGGAAAAGATCGCTGAACTGCGAAGAAAATTCGAAGAAGACAAAGTAAGAATTCAATCG
ATGAGACAATCACGGAAATTTCAACCTTTCTAG

InterProScan

PANTHER
RRP7 (IPR024326) - T[10-290] 3.9E-63
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[46-91] 2.17E-7 - T[125-147] 2.17E-7
CDD
Rrp7A_RRM (IPR034890) - T[56-170] 9.1322E-33
ProSiteProfiles
RRM_dom (IPR000504) - T[56-166] 8.876
Pfam
RRP7 (IPR024326) - T[162-290] 1.9E-32

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RRP7A_HUMAN 43.369 % 204 1.15E-64
RRP7B_HUMAN 54.808 % 106 4.21E-29