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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S2...' > 
  3. Transcript 'Harore.CG.MTP2014.S7...' > 
  4. Transcript 'Harore.CG.MTP2014.S5...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S149.g00089.01.t

Possible name(s)

DHRS13; RDH11; RDH12

Gene model

Harore.CG.MTP2014.S149.g00089

Location

S149 [101,005 / 105,475]

Sequences

Amino acid sequence

Length: 299

>Harore.CG.MTP2014.S149.g00089.01.p
MTAITVNNSGDTMYLLFLGSLALWLYLFVVVRRRKLKCVCDVKMNGKTVLITGASDGLGK
ETALDLAARGARIIMTCRDSQKGRKVKREIERKTGNDGIVLKYLDLADLGSVRKFTKELY
NDEDKLDVLINNAGIGTGTGFSKDGYPILFATNQLGPFLLTMSLLDLLRKSTSPRVVFVA
SIGHHWGKIDFDTLEEPDNEFVTSQFRAYTQSKLASVLTARELHKREHKNGISVFALQPG
TVFTGIFRDFPALLKAITFPLFHLFLKTADEGSQTQIHCSLCPGLEKLSGKYFAECRYD

Nucleotide sequence

Length: 1,857

>Harore.CG.MTP2014.S149.g00089.01.t
AGCTAATATATTTCTATATACAACCACTTTACTACTTTGCCATTAGTAAACAGCGAGAAC
AGACCGAAGAATGACAGCGATCACAGTCAACAATAGCGGCGACACCATGTACCTGTTATT
TCTCGGAAGTCTAGCCTTATGGCTATATCTTTTCGTTGTTGTACGAAGAAGGAAACTAAA
ATGCGTATGCGATGTCAAAATGAATGGAAAGACTGTGTTGATAACAGGAGCTAGCGATGG
ACTAGGAAAAGAAACAGCCTTAGACCTAGCAGCGAGAGGCGCAAGAATCATTATGACTTG
CAGAGATTCACAGAAAGGTCGTAAGGTCAAACGTGAGATTGAGAGAAAGACCGGCAATGA
TGGAATCGTTCTCAAGTACCTCGATCTAGCGGATCTTGGATCAGTTAGAAAATTCACCAA
GGAATTATATAACGATGAAGATAAATTGGATGTTCTCATTAACAATGCGGGAATCGGGAC
AGGGACCGGCTTCTCGAAAGATGGTTATCCTATTCTATTTGCCACAAACCAGCTAGGACC
ATTTCTACTAACCATGTCGTTATTGGACTTGCTCAGGAAGAGCACCAGTCCCAGGGTGGT
TTTCGTCGCCTCCATTGGGCACCATTGGGGCAAGATCGATTTTGACACTTTGGAGGAACC
TGACAACGAATTCGTTACATCACAGTTCCGAGCGTACACTCAAAGCAAGTTGGCAAGTGT
GCTAACAGCGAGGGAACTTCATAAAAGGGAACATAAAAACGGAATCAGTGTATTCGCGTT
ACAACCAGGAACTGTTTTTACCGGCATTTTCCGAGATTTCCCTGCGTTGCTGAAAGCGAT
AACGTTTCCACTGTTTCACCTGTTCCTCAAAACGGCGGACGAGGGAAGTCAAACGCAGAT
ACATTGCAGCTTATGCCCGGGCTTGGAAAAACTAAGCGGAAAATACTTTGCTGAATGCAG
GTATGATTAAGGAGCAAGAACCGGTACTCCCAGAGGACCACGAAAAAATATCGCAAGATC
TTTGGCAGTACTGCGAAAAAGCAGTAGGACTTCCACAAAAGCGACAACATCCCCTTGCGA
AAGATTCTTTCGCATTTATTATACCCAGGTTTCCTAATCCGAAAAGAGATGCATCCAGAT
AAGAAAAATCTCCACACAAACATCTGCTGCGGTATTCTTCGCACGCAATATTATAATTAG
AATCTGTGACGTATACGGGACTGTCAACTTGACATCGTAAGACTCGCAATAGCTTTACGT
TAATTAATCCGGATTTCGTACGAAAAATGACAAGTTTATGATTGTGCCTTGTTACCGAGA
AATGTTACATAAACCCGCTAGTTACGTAAAAGCGATAAATTCCTCAGCGGTCCCTTATTA
ATACCATTGCGTGTCAGGAAAGGTCATAATGACCGCAAGCAGTATATAGGACACTGTCTT
GAATAAGAAATTTGGTTCTGCTAAAATCGTGTGGCACGGCTGCGTACTGTGATTTCAAAC
TGCAAAATCTTTGACTATATATACGACTCCAAGCCTGAAAGAAATTTATTTTTTCTGAAA
TTATTTCATCAAATCTTACTATTATTATATAACTTTGTATAATATATATAATGGAAATTT
CATAGTGCGCTAATAGGCCTGTTACTTCAGGCCCAGGTTATCTTCAGATAAATCCTACAC
TAATTACACAAAATGCTCTCTTGCTGTTATCCATTAGTTACGCACTTTCCAAAAATCGTG
TCGTGTTTCATGATTAAGGTGGTTACTTGTATTTATTTTACCTTATTTATTGGAATATTT
CTATATCAACTTATGTACGCAAAAATGTGAAATAAAAAAATCTTCTGTTTACCGAGG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[44-294] 9.35E-50
Pfam
SDR_fam (IPR002347) - T[47-182] 3.7E-24
PRINTS
SDR_fam (IPR002347) - T[48-65] 1.7E-13 - T[124-135] 1.7E-13 - T[168-184] 1.7E-13 - T[230-247] 1.7E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 41.603 % 194 2.62E-60
DHR13_HUMAN 39.922 % 193 3.83E-59
RDH12_HUMAN 44.656 % 198 9.19E-62