- Transcript 'KH2012:KH.C3.87.v2.C...' >
- Clone 'AHC0AAA200YM24' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S147.g12959.02.t
Possible name(s)
AP1G1; COPG1; COPG2
Gene model
Location
S147 [186,782 / 193,690]
Amino acid sequence
Length: 678
>Harore.CG.MTP2014.S147.g12959.02.p
MVQYHALGLLYHLRKNDRLGTSKMVSKFIKSGLKSPFAYCMLIRIASKLLDEDGSGHDSP
LFDFIESCLRNKHELVIYEAASAIVNMPNCTARELAPAVSVLQLFLSSPKPSFRYAGVRT
LNKVAMKHPSAVTACNLDLENLITDVNRSIATLAITTLLKTGSESSVDRLMKQITSFMSE
ISDEFKVVVVRAISALCQKYPRKHAVMMNYLSSMLRDEGGFEYKKSIVECIIAIIEESPD
SKESGLEHLCEFIEDCEHTVLATKIIHLLGREGPKTSNPSKYIRFIYNRVILENEAVRAS
AVSALAKFGAHCDDLLPSILTLLARSMLDEDDEVRDRATYYYHVLQQKQKALNSAYILNG
LTVSIPALERCLHQYIQEASEEPFNIKSVPLVTAAPTEMKTDVIKPKEKVAASRQEIYSE
QLSKIPEFAVLGPLFKSSQPSELTESETEYVVSCVKHTFSKNIVFQFDCTNTLNDQVLEN
VTVQMEPSDGFEVIAYVPCPSLVYNKPGVTYACVAIPEEDPTEVTTVLSCILKFTVKDCD
PNTGDTDEEGYEDEYLLEDVEVAVADHVQKVLKPNFGASWDEVGGENELEDTYALSSMNT
LEEAVQNITKHLGMQACERSDKVPENKSAHTLYLAGVYRGGHDILARAKLVLKDGVTMQL
TVRSTDATSAQVISAAVS
Nucleotide sequence
Length: 2,875
>Harore.CG.MTP2014.S147.g12959.02.t
ATGTTCGGCACAACAGAGTACAATCTGATGCAGAGATTTGATGAGGAAGACTCGCTGCAG
CGGTTCCGGGTGACGTGTATTTGGGAATTTAATTCTATTCTACGTGTGTCTAAGTATTTC
GGTATAACCGCATACATTTTGATATTATATCAGTTAGGATTAAACATTCAAAACGTTATC
ATGATGCGGCGAGACAAAAAAGATGAAGAAGCAGGGGCCAATAATCCGTTTGCTGGCATC
GAGCGATTAGCCGTCATCCAGGACGCACGCGTCTTCCATCAGACGCCAATCAACCCTAGG
CGATGCTGTGACATCTTGACAAAGATCATCTACCTTATCAACCAAGGCGAGAACTTCAGC
ACAGACGAAGCGACAGAAACATTCTTCGCGATGACGAAACTGTTTCAAAATAGTGATGTT
GTCATGAGAAGAATGTGTTATCTCACTATCAAAGAAATGTCAAATATGACTGAAAATGCG
TTCATTGTCACCCAAAGCTTGACCAAGGACATGAACGGTCGTGAAGACATTTTTCGTGCC
GCCGCCGTCCGTGCCTTGTGTGCCATAACTGACATTAGCACCTTGCAAGGTATAGAACGC
TACATGAAACAAGCTATAGTGGATAAGGTTGGTTCATTCTGTCTCGAGTGCAGCATTGGT
ATCTTCTCTTCATTTGGCTAAAAAAGCTCCTGATGTTGTCAAACGTTGGGTCAATGAAGC
TCAGGAAGCATGCTCTAGTGATAATATTATGGTTCAGTACCATGCTCTCGGCCTTCTCTA
TCACCTGAGAAAAAACGATCGCCTCGGCACGTCCAAAATGGTTTCTAAGTTTATCAAGTC
TGGCTTGAAGTCTCCTTTCGCTTACTGCATGCTGATCAGGATTGCAAGCAAACTTCTGGA
TGAAGATGGTTCTGGGCACGACAGTCCGCTGTTTGACTTTATTGAAAGTTGCCTTCGTAA
CAAGCACGAGTTAGTGATATACGAAGCTGCTTCTGCCATTGTTAATATGCCAAATTGTAC
AGCTAGGGAGTTGGCCCCTGCTGTTTCAGTCCTTCAGCTTTTCCTCAGTTCACCAAAGCC
TTCTTTCCGCTATGCTGGAGTACGCACTTTAAATAAGGTGGCTATGAAACATCCATCAGC
TGTTACCGCATGCAACCTGGACTTGGAGAATCTAATCACAGATGTTAACCGCAGCATCGC
TACACTGGCCATAACGACTTTGCTCAAGACCGGCAGCGAGAGTAGCGTCGATAGACTGAT
GAAACAAATCACTTCGTTCATGTCCGAAATCTCAGATGAATTCAAGGTGGTCGTGGTCCG
TGCCATCTCTGCTCTTTGTCAAAAGTATCCGAGAAAACATGCTGTCATGATGAATTATTT
ATCTTCCATGCTGAGAGATGAGGGTGGCTTCGAGTACAAAAAGTCAATCGTTGAGTGCAT
CATCGCCATCATCGAGGAATCTCCTGACTCGAAAGAATCTGGACTCGAGCATCTCTGTGA
ATTTATCGAGGACTGCGAACATACAGTGTTGGCAACCAAGATCATTCATTTGCTTGGAAG
AGAAGGTCCGAAAACCAGCAATCCATCCAAGTATATTCGTTTCATCTACAACAGAGTGAT
TTTGGAGAACGAAGCTGTCAGGGCTTCTGCTGTTTCTGCGCTCGCGAAGTTTGGTGCTCA
TTGTGACGATTTACTCCCAAGTATTCTCACTCTCCTTGCTCGCTCCATGCTCGACGAGGA
TGATGAAGTGAGGGACAGAGCGACCTATTATTATCATGTTCTTCAGCAAAAGCAGAAGGC
ATTGAACTCAGCTTACATATTAAATGGTCTAACTGTATCTATTCCCGCATTGGAGAGATG
TCTTCACCAATACATCCAAGAGGCTTCGGAAGAACCTTTCAATATAAAATCAGTTCCGTT
GGTCACTGCTGCCCCTACTGAGATGAAAACGGATGTTATCAAGCCCAAGGAAAAAGTCGC
TGCTTCTCGTCAAGAAATCTATTCTGAGCAACTTTCGAAGATTCCTGAGTTCGCGGTCCT
CGGCCCTCTGTTCAAATCGTCGCAGCCGTCGGAGCTTACCGAGTCAGAAACCGAATACGT
TGTTTCTTGTGTGAAGCATACGTTCAGTAAAAATATTGTGTTTCAGTTTGATTGTACCAA
CACTCTGAACGATCAAGTGCTTGAAAATGTCACAGTACAAATGGAGCCAAGTGACGGTTT
TGAAGTCATAGCATACGTTCCCTGTCCTTCTTTAGTTTACAACAAACCAGGCGTCACTTA
CGCATGTGTGGCAATACCAGAAGAAGATCCAACGGAGGTGACGACAGTTCTGTCATGTAT
CCTCAAGTTTACAGTTAAGGATTGCGATCCAAATACAGGAGACACTGATGAAGAAGGATA
TGAAGATGAATATCTTCTTGAAGATGTCGAGGTAGCTGTTGCAGACCACGTACAAAAAGT
CCTGAAACCGAATTTTGGAGCTTCCTGGGACGAGGTGGGAGGCGAAAACGAACTAGAAGA
TACATATGCGCTGTCTAGCATGAATACTTTAGAAGAAGCTGTACAGAATATAACCAAACA
TTTGGGCATGCAAGCATGTGAAAGATCAGATAAAGTACCAGAGAACAAGTCAGCTCACAC
ACTCTACTTAGCTGGTGTCTACAGAGGTGGACACGACATCCTAGCCAGAGCTAAACTCGT
TCTCAAAGATGGGGTGACCATGCAGCTGACAGTTCGCAGCACAGATGCCACTTCAGCACA
AGTTATATCTGCTGCTGTTTCTTAGTTTTGTTGCTATAGTATAATGATGTACAATATAAA
GTGTATCATCGATCACACATTACAACTCAAGCTTGTCTGTTTTGTAAGATTATGT
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[1-348] 2.6E-83 |
| PANTHER |
Coatomer_gsu (IPR017106) - T[1-677] 0.0 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[1-353] 2.62E-60 |
| PIRSF |
Coatomer_gsu (IPR017106) - T[1-678] 2.0E-261 |
| Gene3D |
ARM-like (IPR011989) - T[1-370] 7.4E-58 |
| Gene3D |
Coatomer_gsu_app_sf (IPR037067) - T[406-563] 1.3E-66 |
| SUPERFAMILY |
Clathrin_app_Ig-like_sf (IPR013041) - T[409-566] 3.77E-58 |
| Pfam |
Coatomer_gsu_app_Ig-like_dom (IPR013040) - T[417-562] 6.5E-60 |
| Gene3D |
TBP_dom_sf (IPR012295) - T[564-678] 6.5E-46 |
| Pfam |
Coatomer_g_Cpla (IPR032154) - T[565-677] 1.5E-39 |
| SUPERFAMILY |
Coatomer/calthrin_app_sub_C (IPR009028) - T[567-677] 7.65E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPG2_HUMAN | 72.727 % | 1058 | 0 |
| COPG1_HUMAN | 71.93 % | 1043 | 0 |