- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S147.g12959.01.t
Possible name(s)
AP1G1; COPG1; COPG2
Gene model
Location
S147 [184,988 / 186,851]
Amino acid sequence
Length: 441
>Harore.CG.MTP2014.S147.g12959.01.p
MYNIKCIIDHTLQLKLVCFIRMNRPETRAMRLFLKKFAQIYNGKCKPLRVAHRWSSSEVE
NRIVLGEMNEIHLPKTYKCDSSNPGDHGLKDEGLFYTVPDDIHKLICPENGSRKALRKTF
QRECNAFKETNIMIRRPALEIINCMKNADYDNPVIRYLIYGNLGTGKSMSLQHITHYALH
EGWIIVPTLYAWDWMGYHRRFKPMMREELKESSWNTDRLDQPVWAMSWLETFKTINGKKL
QEIKTTREYVWTKREKTEVGQTLTSLVDQGIARARISTDVIGCIMRELRTQPSENLPRVL
VTVDAFNAIFHRTSVKSKLGNLVEPDNLSFIYNLKKMIRNDWTNGAVVLAMNMSGERPEL
FTRDVVDPYELIGAHGFDLIDPHLPIEVKNYSEKEVLQLLSLYCDKKWLTGRSLTQEGMA
EILQVCCGNPEALCNLCSSLY
Nucleotide sequence
Length: 1,326
>Harore.CG.MTP2014.S147.g12959.01.t
ATGTACAATATAAAGTGTATCATCGATCACACATTACAACTCAAGCTTGTCTGTTTTATT
CGTATGAATAGACCAGAAACGAGGGCCATGCGATTGTTTTTAAAGAAATTTGCGCAAATC
TATAATGGGAAATGCAAACCTCTTCGGGTTGCTCATCGGTGGTCGAGCTCAGAAGTAGAG
AACCGTATCGTTCTTGGCGAGATGAACGAAATTCATTTGCCGAAAACGTACAAGTGCGAT
AGCAGTAACCCCGGAGATCACGGATTAAAAGACGAGGGACTTTTCTATACCGTACCAGAT
GATATTCATAAACTAATTTGTCCGGAAAACGGCAGCAGGAAAGCCCTGCGAAAAACGTTT
CAGAGAGAGTGCAACGCGTTCAAAGAAACCAACATAATGATTCGAAGACCGGCTCTGGAG
ATTATAAATTGCATGAAAAATGCTGACTATGACAATCCAGTAATTCGGTATTTGATTTAT
GGAAATTTGGGGACTGGTAAGAGCATGTCCCTGCAGCACATAACACATTATGCCCTCCAT
GAAGGATGGATTATAGTTCCGACTCTGTATGCCTGGGACTGGATGGGCTATCACAGGAGA
TTTAAACCTATGATGCGAGAGGAACTAAAAGAATCGTCATGGAATACGGATCGACTGGAC
CAACCCGTCTGGGCGATGTCTTGGTTGGAAACCTTCAAAACGATCAACGGTAAAAAGTTG
CAGGAAATCAAAACAACCAGGGAGTATGTGTGGACGAAGCGGGAAAAAACTGAAGTAGGA
CAGACGCTGACATCCCTGGTAGATCAAGGGATTGCCAGAGCTAGAATATCAACCGACGTC
ATAGGCTGCATCATGCGAGAGCTCAGGACACAGCCGTCGGAAAATTTGCCAAGAGTACTT
GTCACCGTCGATGCCTTTAACGCCATTTTCCATAGAACCAGTGTGAAATCAAAATTAGGA
AACTTGGTTGAGCCTGATAATCTTTCTTTTATTTACAACCTGAAAAAAATGATTCGCAAC
GATTGGACGAACGGTGCTGTCGTCCTGGCGATGAACATGAGCGGCGAAAGACCTGAGCTC
TTTACGAGAGACGTTGTCGATCCTTACGAACTGATAGGCGCACACGGATTCGACCTTATC
GACCCGCATTTGCCGATCGAAGTGAAAAACTATTCTGAAAAAGAAGTTCTTCAACTGCTT
TCATTATACTGTGACAAAAAATGGTTGACGGGAAGATCATTAACTCAAGAAGGAATGGCA
GAAATTTTGCAAGTGTGCTGCGGAAACCCAGAAGCACTTTGCAATCTTTGTAGTTCGCTG
TATTGA
| PANTHER |
Ribosomal_S23/S29_mit (IPR019368) - T[77-441] 1.6E-95 |
| Pfam |
Ribosomal_S23/S29_mit (IPR019368) - T[133-434] 9.6E-61 |
| PRINTS |
Ribosomal_S29_mit (IPR008092) - T[135-146] 6.2E-32 - T[153-170] 6.2E-32 - T[176-187] 6.2E-32 - T[249-260] 6.2E-32 - T[265-279] 6.2E-32 - T[298-310] 6.2E-32 - T[368-385] 6.2E-32 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[140-183] 3.88E-9 - T[231-258] 3.88E-9 - T[293-440] 3.88E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RT29_HUMAN | 37.432 % | 256 | 1.46E-81 |