- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S147.g08883.01.t
Possible name(s)
AP4B1; COPG1; COPG2
Gene model
Location
S147 [186,872 / 193,690]
Amino acid sequence
Length: 926
>Harore.CG.MTP2014.S147.g08883.01.p
MFGTTEYNLMQRFDEEDSLQRFRVTCIWEFNSILRVSKYFGITAYILILYQLGLNIQNVI
MMRRDKKDEEAGANNPFAGIERLAVIQDARVFHQTPINPRRCCDILTKIIYLINQGENFS
TDEATETFFAMTKLFQNSDVVMRRMCYLTIKEMSNMTENAFIVTQSLTKDMNGREDIFRA
AAVRALCAITDISTLQGIERYMKQAIVDKVHSVSSAALVSSLHLAKKAPDVVKRWVNEAQ
EACSSDNIMVQYHALGLLYHLRKNDRLGTSKMVSKFIKSGLKSPFAYCMLIRIASKLLDE
DGSGHDSPLFDFIESCLRNKHELVIYEAASAIVNMPNCTARELAPAVSVLQLFLSSPKPS
FRYAGVRTLNKVAMKHPSAVTACNLDLENLITDVNRSIATLAITTLLKTGSESSVDRLMK
QITSFMSEISDEFKVVVVRAISALCQKYPRKHAVMMNYLSSMLRDEGGFEYKKSIVECII
AIIEESPDSKESGLEHLCEFIEDCEHTVLATKIIHLLGREGPKTSNPSKYIRFIYNRVIL
ENEAVRASAVSALAKFGAHCDDLLPSILTLLARSMLDEDDEVRDRATYYYHVLQQKQKAL
NSAYILNGLTVSIPALERCLHQYIQEASEEPFNIKSVPLVTAAPTEMKTDVIKPKEKVAA
SRQEIYSEQLSKIPEFAVLGPLFKSSQPSELTESETEYVVSCVKHTFSKNIVFQFDCTNT
LNDQVLENVTVQMEPSDGFEVIAYVPCPSLVYNKPGVTYACVAIPEEDPTEVTTVLSCIL
KFTVKDCDPNTGDTDEEGYEDEYLLEDVEVAVADHVQKVLKPNFGASWDEVGGENELEDT
YALSSMNTLEEAVQNITKHLGMQACERSDKVPENKSAHTLYLAGVYRGGHDILARAKLVL
KDGVTMQLTVRSTDATSAQVISAAVS
Nucleotide sequence
Length: 2,781
>Harore.CG.MTP2014.S147.g08883.01.t
ATGTTCGGCACAACAGAGTACAATCTGATGCAGAGATTTGATGAGGAAGACTCGCTGCAG
CGGTTCCGGGTGACGTGTATTTGGGAATTTAATTCTATTCTACGTGTGTCTAAGTATTTC
GGTATAACCGCATACATTTTGATATTATATCAGTTAGGATTAAACATTCAAAACGTTATC
ATGATGCGGCGAGACAAAAAAGATGAAGAAGCAGGGGCCAATAATCCGTTTGCTGGCATC
GAGCGATTAGCCGTCATCCAGGACGCACGCGTCTTCCATCAGACGCCAATCAACCCTAGG
CGATGCTGTGACATCTTGACAAAGATCATCTACCTTATCAACCAAGGCGAGAACTTCAGC
ACAGACGAAGCGACAGAAACATTCTTCGCGATGACGAAACTGTTTCAAAATAGTGATGTT
GTCATGAGAAGAATGTGTTATCTCACTATCAAAGAAATGTCAAATATGACTGAAAATGCG
TTCATTGTCACCCAAAGCTTGACCAAGGACATGAACGGTCGTGAAGACATTTTTCGTGCC
GCCGCCGTCCGTGCCTTGTGTGCCATAACTGACATTAGCACCTTGCAAGGTATAGAACGC
TACATGAAACAAGCTATAGTGGATAAGGTTCATTCTGTCTCGAGTGCAGCATTGGTATCT
TCTCTTCATTTGGCTAAAAAAGCTCCTGATGTTGTCAAACGTTGGGTCAATGAAGCTCAG
GAAGCATGCTCTAGTGATAATATTATGGTTCAGTACCATGCTCTCGGCCTTCTCTATCAC
CTGAGAAAAAACGATCGCCTCGGCACGTCCAAAATGGTTTCTAAGTTTATCAAGTCTGGC
TTGAAGTCTCCTTTCGCTTACTGCATGCTGATCAGGATTGCAAGCAAACTTCTGGATGAA
GATGGTTCTGGGCACGACAGTCCGCTGTTTGACTTTATTGAAAGTTGCCTTCGTAACAAG
CACGAGTTAGTGATATACGAAGCTGCTTCTGCCATTGTTAATATGCCAAATTGTACAGCT
AGGGAGTTGGCCCCTGCTGTTTCAGTCCTTCAGCTTTTCCTCAGTTCACCAAAGCCTTCT
TTCCGCTATGCTGGAGTACGCACTTTAAATAAGGTGGCTATGAAACATCCATCAGCTGTT
ACCGCATGCAACCTGGACTTGGAGAATCTAATCACAGATGTTAACCGCAGCATCGCTACA
CTGGCCATAACGACTTTGCTCAAGACCGGCAGCGAGAGTAGCGTCGATAGACTGATGAAA
CAAATCACTTCGTTCATGTCCGAAATCTCAGATGAATTCAAGGTGGTCGTGGTCCGTGCC
ATCTCTGCTCTTTGTCAAAAGTATCCGAGAAAACATGCTGTCATGATGAATTATTTATCT
TCCATGCTGAGAGATGAGGGTGGCTTCGAGTACAAAAAGTCAATCGTTGAGTGCATCATC
GCCATCATCGAGGAATCTCCTGACTCGAAAGAATCTGGACTCGAGCATCTCTGTGAATTT
ATCGAGGACTGCGAACATACAGTGTTGGCAACCAAGATCATTCATTTGCTTGGAAGAGAA
GGTCCGAAAACCAGCAATCCATCCAAGTATATTCGTTTCATCTACAACAGAGTGATTTTG
GAGAACGAAGCTGTCAGGGCTTCTGCTGTTTCTGCGCTCGCGAAGTTTGGTGCTCATTGT
GACGATTTACTCCCAAGTATTCTCACTCTCCTTGCTCGCTCCATGCTCGACGAGGATGAT
GAAGTGAGGGACAGAGCGACCTATTATTATCATGTTCTTCAGCAAAAGCAGAAGGCATTG
AACTCAGCTTACATATTAAATGGTCTAACTGTATCTATTCCCGCATTGGAGAGATGTCTT
CACCAATACATCCAAGAGGCTTCGGAAGAACCTTTCAATATAAAATCAGTTCCGTTGGTC
ACTGCTGCCCCTACTGAGATGAAAACGGATGTTATCAAGCCCAAGGAAAAAGTCGCTGCT
TCTCGTCAAGAAATCTATTCTGAGCAACTTTCGAAGATTCCTGAGTTCGCGGTCCTCGGC
CCTCTGTTCAAATCGTCGCAGCCGTCGGAGCTTACCGAGTCAGAAACCGAATACGTTGTT
TCTTGTGTGAAGCATACGTTCAGTAAAAATATTGTGTTTCAGTTTGATTGTACCAACACT
CTGAACGATCAAGTGCTTGAAAATGTCACAGTACAAATGGAGCCAAGTGACGGTTTTGAA
GTCATAGCATACGTTCCCTGTCCTTCTTTAGTTTACAACAAACCAGGCGTCACTTACGCA
TGTGTGGCAATACCAGAAGAAGATCCAACGGAGGTGACGACAGTTCTGTCATGTATCCTC
AAGTTTACAGTTAAGGATTGCGATCCAAATACAGGAGACACTGATGAAGAAGGATATGAA
GATGAATATCTTCTTGAAGATGTCGAGGTAGCTGTTGCAGACCACGTACAAAAAGTCCTG
AAACCGAATTTTGGAGCTTCCTGGGACGAGGTGGGAGGCGAAAACGAACTAGAAGATACA
TATGCGCTGTCTAGCATGAATACTTTAGAAGAAGCTGTACAGAATATAACCAAACATTTG
GGCATGCAAGCATGTGAAAGATCAGATAAAGTACCAGAGAACAAGTCAGCTCACACACTC
TACTTAGCTGGTGTCTACAGAGGTGGACACGACATCCTAGCCAGAGCTAAACTCGTTCTC
AAAGATGGGGTGACCATGCAGCTGACAGTTCGCAGCACAGATGCCACTTCAGCACAAGTT
ATATCTGCTGCTGTTTCTTAG
| PIRSF |
Coatomer_gsu (IPR017106) - T[61-926] 0.0 |
| PANTHER |
Coatomer_gsu (IPR017106) - T[63-925] 0.0 |
| Gene3D |
ARM-like (IPR011989) - T[79-369] 9.1E-104 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[85-601] 3.17E-90 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[87-596] 1.5E-124 |
| Gene3D |
Coatomer_gsu_app_sf (IPR037067) - T[655-811] 3.4E-66 |
| SUPERFAMILY |
Clathrin_app_Ig-like_sf (IPR013041) - T[657-814] 6.28E-58 |
| Pfam |
Coatomer_gsu_app_Ig-like_dom (IPR013040) - T[665-810] 1.1E-59 |
| Gene3D |
TBP_dom_sf (IPR012295) - T[812-926] 1.0E-45 |
| Pfam |
Coatomer_g_Cpla (IPR032154) - T[813-925] 2.4E-39 |
| SUPERFAMILY |
Coatomer/calthrin_app_sub_C (IPR009028) - T[815-925] 1.22E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPG2_HUMAN | 71.56 % | 1308 | 0 |
| COPG1_HUMAN | 71.51 % | 1288 | 0 |
