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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S140.g12641.01.t

Possible name(s)

ATP1B1; ATP1B2; ATP1B3

Gene model

Harore.CG.MTP2014.S140.g12641

Location

S140 [177,072 / 178,309]

Sequences

Amino acid sequence

Length: 357

>Harore.CG.MTP2014.S140.g12641.01.p
MHQRSFVLHSYTPKFSSTFQSANENSSHGSVMSSTSIDQPKIGCSQRWDEFKTFLYNPSN
KTVLGRTGVSWAKILFFYMIYYGFLACLFALSITIVLNSLDEYTPRYQTRVQTPGVAIQP
KIPSNVEQTSDIKFKLGDANTYQRYLDQMDKFLKPYQDQSDNNLFHNCDLKGMPLTGQKY
SADQTAKACRFDLASLGSCVASPYGYPEGNPCILVKINRIIDWFPVGYTNISTATGNGDS
NAPPLSTFLKAYNIPYRPYLIYTACYGSTSEDEEKLNQGDRTNTRYYPEQNGLPFVYFPY
KGKKRQPSYLNPVVAVQFTNVTKDVDIDVKCKAYALNIRDSKQMAEGYFDFVLKVES

Nucleotide sequence

Length: 1,074

>Harore.CG.MTP2014.S140.g12641.01.t
ATGCATCAACGCTCATTCGTGTTACACAGCTATACACCCAAGTTCAGTTCAACATTCCAA
AGTGCTAACGAGAATTCATCGCACGGAAGCGTTATGTCATCCACCAGCATAGACCAGCCC
AAGATTGGTTGTAGCCAAAGATGGGACGAATTCAAGACTTTTTTGTACAACCCAAGCAAC
AAAACCGTCCTCGGTAGAACAGGAGTGAGCTGGGCCAAGATTCTGTTCTTCTACATGATC
TACTACGGATTTCTCGCCTGCCTGTTCGCGCTTTCGATCACAATTGTTCTGAACAGCCTT
GACGAGTACACTCCCAGATACCAGACCCGTGTACAAACTCCCGGAGTCGCAATTCAGCCG
AAAATCCCTTCAAATGTTGAGCAGACCAGCGACATCAAGTTTAAGCTCGGAGATGCAAAC
ACTTACCAACGATACCTTGACCAGATGGATAAATTTCTGAAGCCCTATCAGGATCAGAGC
GATAACAACCTTTTTCACAACTGCGATTTGAAAGGAATGCCACTGACAGGTCAAAAATAC
AGTGCGGATCAAACAGCTAAGGCTTGTCGCTTCGACCTCGCCTCACTCGGAAGTTGTGTC
GCGTCACCTTACGGATATCCTGAGGGAAATCCTTGTATCCTGGTCAAAATCAACCGAATT
ATAGATTGGTTTCCCGTCGGTTACACCAACATTTCTACTGCAACAGGAAACGGTGACTCG
AATGCCCCGCCTTTGAGCACCTTTTTGAAAGCATACAATATCCCCTACAGGCCATACTTG
ATTTATACGGCTTGCTACGGTTCAACTTCGGAGGATGAAGAAAAACTGAACCAGGGTGAC
AGAACAAATACCAGATATTACCCAGAACAGAACGGATTGCCATTCGTCTACTTTCCATAC
AAAGGTAAAAAACGTCAACCGAGTTACCTCAATCCGGTGGTTGCGGTGCAGTTCACAAAC
GTCACAAAAGATGTAGACATCGATGTCAAATGCAAGGCGTATGCTCTCAACATAAGAGAC
AGCAAGCAGATGGCGGAAGGCTACTTTGATTTCGTCCTGAAAGTGGAAAGTTGA

InterProScan

Gene3D
Na/K_ATPase_sub_beta_sf (IPR038702) - T[42-357] 3.8E-84
TIGRFAM
Na/K_ATPase_sub_beta (IPR000402) - T[42-356] 3.7E-78
Pfam
Na/K_ATPase_sub_beta (IPR000402) - T[44-348] 9.1E-87
PANTHER
Na/K_ATPase_sub_beta (IPR000402) - T[45-355] 1.1E-76
ProSitePatterns
Na/K_ATPase_sub_beta (IPR000402) - T[51-71] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AT1B1_HUMAN 36.503 % 197 7.39E-61
AT1B2_HUMAN 31.098 % 177 1.59E-53
AT1B3_HUMAN 32.45 % 149 7.63E-43