Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S140.g07858.01.t

Possible name(s)

SHQ1

Gene model

Harore.CG.MTP2014.S140.g07858

Location

S140 [6,623 / 7,958]

Sequences

Amino acid sequence

Length: 444

>Harore.CG.MTP2014.S140.g07858.01.p
MITPKFELNQDENFILIRVEAPYSRVSDAEVFVDEKVFKFYSKPYILNLHLQGCIVDDEH
SSCVYDSDKGEYSIKISKQVPGEYFEDLCLLTKFLSPTEQKVKSTPCIEVITGENSEVSD
DEEEELDWLFAEESDTLTLTGYGVGFANQKFDAHAKLMEEVDLVQVNNPEKLSRIERKML
REAHEDDKFDPHHYLADLFENDSIEEFVKLVPPWCKQPYTEEFLESEKFALKNLANKEYL
IEKNDLQEVYLGLIDILYGCAYNWRFTEGEANVESAWTIKTLSSTLSWFDHCSDLPSKLR
SCYRRALVFPLFRSWTLAETCHRDVVAILSHGKKCILKRLLETYAIFNECDPNYVINDLF
IKDYCIWIQKANSKTISSLAVALENVKITKENVGFELVDLENAAQVVLSEENCNEKSPHD
VSDNDADDLSDKIKKISLASFDKV

Nucleotide sequence

Length: 1,335

>Harore.CG.MTP2014.S140.g07858.01.t
ATGATTACTCCTAAATTCGAACTTAATCAAGATGAGAATTTCATTTTGATTCGTGTGGAA
GCACCATATTCGAGGGTTTCAGACGCAGAAGTGTTTGTCGACGAGAAGGTATTCAAATTC
TATTCAAAGCCTTATATCCTAAACCTTCATCTTCAAGGATGCATAGTTGACGATGAGCAT
TCTAGTTGTGTATACGATTCAGATAAAGGAGAATATTCGATAAAGATATCAAAACAAGTA
CCTGGAGAGTATTTTGAAGACCTGTGTTTGCTCACAAAATTCCTCTCCCCAACTGAGCAG
AAAGTGAAATCCACACCATGTATTGAAGTCATCACTGGTGAAAACAGTGAAGTATCAGAT
GATGAAGAAGAAGAACTGGACTGGCTTTTTGCCGAAGAAAGTGACACCTTAACTCTTACA
GGCTATGGAGTCGGATTTGCGAATCAAAAATTTGATGCGCATGCAAAACTAATGGAGGAG
GTAGATCTTGTGCAAGTTAACAATCCAGAAAAACTAAGCAGGATAGAGAGGAAAATGCTG
AGAGAAGCTCACGAAGATGACAAATTTGATCCCCACCATTATTTGGCGGATCTGTTCGAG
AATGATTCTATCGAGGAATTTGTGAAACTGGTACCACCATGGTGCAAGCAACCATACACA
GAAGAATTCCTCGAAAGTGAGAAATTTGCTTTGAAAAACTTGGCGAACAAAGAATATCTG
ATTGAAAAAAATGATTTGCAAGAAGTTTATTTGGGACTTATTGACATTCTTTATGGTTGT
GCATATAACTGGAGGTTCACTGAAGGTGAAGCTAATGTAGAGTCTGCGTGGACTATTAAA
ACCCTGAGTTCAACTCTGTCATGGTTTGACCACTGCTCTGATTTGCCAAGCAAGTTGAGA
TCATGCTACAGGCGAGCACTCGTGTTTCCTCTCTTCAGAAGTTGGACTCTTGCGGAAACT
TGTCATAGGGATGTTGTGGCCATATTGAGTCATGGTAAAAAATGTATCCTCAAACGGTTA
TTGGAAACATATGCTATTTTTAATGAGTGCGATCCAAATTATGTTATTAATGATTTGTTC
ATCAAAGACTATTGCATATGGATTCAAAAGGCGAACTCCAAGACAATCAGTTCCCTTGCT
GTTGCCTTGGAAAATGTCAAAATTACAAAAGAAAATGTTGGATTTGAACTAGTTGATTTA
GAAAATGCAGCTCAAGTAGTTCTTAGTGAAGAAAATTGTAATGAAAAATCTCCACATGAT
GTGAGTGATAATGATGCTGATGATCTATCAGACAAGATAAAAAAAATCAGTCTTGCATCA
TTTGATAAGGTTTAA

InterProScan

ProSiteProfiles	CS_dom (IPR007052) - T[1-89] 12.179
Gene3D	HSP20-like_chaperone (IPR008978) - T[1-132] 1.1E-33
SUPERFAMILY	HSP20-like_chaperone (IPR008978) - T[3-88] 2.13E-6
Pfam	SHQ1 (IPR007009) - T[222-391] 2.7E-60

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SHQ1_HUMAN	39.663 %	296	6.84E-95