- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S137.g07530.01.t
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
S137 [118,991 / 120,089]
Amino acid sequence
Length: 365
>Harore.CG.MTP2014.S137.g07530.01.p
MAEVFKFGCQPICVHAWNANRTQIAICPNNNEVEIHEKCGKQWKLIHTLKEHTGRVTGID
WAAKSQRLVTCSSDRNAYVWTVDEQTKEWKPTLVILRINRAATCVKWSPNEDKFAVGSGA
RVISVCYFESENDWWVSKHIKKPIRSTILSIDWHPNNILIAAGSSDFKARVFSGYIKDIE
PKPSSTIWGKKMTFGNVMQEIACDGWVQGVKFSGSGDKMAIVSQDSAIRVVKGGNDAVVV
KASHLPFCDCAWITELSFVAVGHDCNPMLFVTDDNCSSLKFESKLDQVSQGGGAKSMSAM
DRFKMLDKKASTDTQGSEIRTKHKNSITQIVNYGPNKFSTSGMDGNVIIWDVKSLASSIA
GLRIA
Nucleotide sequence
Length: 1,098
>Harore.CG.MTP2014.S137.g07530.01.t
ATGGCTGAAGTATTCAAGTTTGGGTGCCAACCCATATGCGTACACGCTTGGAACGCAAAT
CGTACTCAGATCGCTATTTGCCCCAATAACAACGAGGTTGAGATCCACGAAAAGTGTGGA
AAACAATGGAAGTTGATTCACACTTTGAAGGAACACACAGGTCGTGTTACCGGGATCGAC
TGGGCTGCTAAGAGTCAGAGATTGGTGACTTGTTCGAGCGACCGTAACGCTTACGTTTGG
ACAGTGGACGAGCAGACGAAAGAGTGGAAGCCGACACTCGTAATTCTACGTATTAACCGT
GCCGCGACCTGCGTGAAATGGTCGCCAAACGAGGATAAGTTTGCTGTCGGTAGTGGCGCC
AGGGTGATATCGGTCTGCTACTTTGAATCCGAAAATGACTGGTGGGTCAGTAAGCACATA
AAAAAGCCCATACGTTCAACGATTCTCAGCATTGATTGGCATCCAAACAACATCTTGATT
GCGGCCGGCTCATCAGACTTTAAGGCTCGTGTGTTTTCAGGATACATCAAGGACATTGAA
CCGAAGCCTTCTTCTACGATCTGGGGAAAAAAGATGACGTTTGGGAACGTCATGCAAGAA
ATTGCCTGTGATGGCTGGGTTCAAGGGGTCAAATTTTCTGGGTCTGGAGATAAGATGGCT
ATTGTTTCCCAGGACAGCGCTATCAGGGTTGTCAAAGGAGGAAATGATGCTGTCGTTGTT
AAAGCCAGCCATCTTCCGTTCTGCGACTGTGCCTGGATAACCGAACTGAGCTTCGTCGCT
GTAGGGCACGACTGCAACCCAATGTTGTTTGTAACCGACGATAACTGCTCTTCCTTGAAG
TTCGAGAGCAAGCTTGATCAAGTTTCTCAAGGAGGCGGGGCGAAGAGTATGTCTGCAATG
GACCGTTTCAAGATGTTGGACAAGAAGGCATCGACCGACACTCAGGGGTCGGAAATCAGG
ACCAAACACAAGAATTCCATTACGCAGATTGTCAACTATGGTCCGAACAAATTCTCAACA
AGCGGTATGGATGGAAATGTCATTATCTGGGATGTCAAATCTCTGGCATCGTCCATTGCC
GGACTTCGTATTGCTTGA
| PIRSF |
ARPC1 (IPR017383) - T[1-357] 3.7E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-352] 2.7E-141 |
| PANTHER |
ARPC1 (IPR017383) - T[2-363] 7.4E-146 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[10-283] 2.56E-43 - T[311-354] 2.56E-43 |
| SMART |
WD40_repeat (IPR001680) - T[42-81] 6.1E-8 - T[88-127] 4.2 - T[137-173] 0.55 - T[194-232] 7.0 - T[312-351] 3.8 |
| Pfam |
WD40_repeat (IPR001680) - T[43-80] 2.6E-4 - T[143-172] 0.063 - T[322-351] 0.22 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[49-90] 11.21 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[49-90] 10.707 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 57.143 % | 420 | 4.04E-147 |
| ARC1B_HUMAN | 55.014 % | 405 | 2.72E-141 |