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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R151...' > 
  2. Transcript 'Boleac.CG.SB_v3.S85....' > 
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S130.g08579.01.t

Possible name(s)

RIOK1; RIOK2; RIOK3

Gene model

Harore.CG.MTP2014.S130.g08579

Location

S130 [157,247 / 161,092]

Sequences

Amino acid sequence

Length: 593

>Harore.CG.MTP2014.S130.g08579.01.p
MNYTTWERDVVPGQFDDVDERDEMVQIQRLKYVKDEDGSELPRVGKKAESDPEDEEEMNS
FDERSYQDWDEYSDFVDNHTGFTGKKQFVGACQPMEKTLSKFADKIHLDAYEHPSIPSHN
IAQVRQLDKRTVPIKNRVKDKSDRATVEQVLDPRTRIILFKMLSRGIIKEINGVISTGKE
ANVYHATTQHGEDRALKIYKTSILTFKDRDRYVSGEFRFRRGYCKGNPRKMVATWAEKEM
RNLTRIHQAGLPSPQPIMLRSHVLLMSFIGTNGWPAPLLKDAVLSRSKSCQLYLECIHIL
RRIYHDCKLVHADFSEYNLLYHEGQLVVIDVSQSVEHDHPHAMDFLRKDCSNVNEFFRKK
EVAVMTLRELFDFVTDINITENNIDAYLENAMMKTSERTLQKENSDNEMESANYDVEEEV
FRQVFIPRTLGQVENFEEDIDAVHITGKDHHIVYRTVTGLDSNLCHEKETNEADTGEGCT
SDSEGSSQDYCGESQDDSRGCPVICTRNMSKEEKKEHKLRVKEENREKRTKKVPKHASVY
NLVSKCGATVLKILNQYYTKQQYQYSIETNNLNHRLLHSICHSDNIQNKDCLP

Nucleotide sequence

Length: 2,209

>Harore.CG.MTP2014.S130.g08579.01.t
AGTTCTGCGTATGGTATAATGCACTTGAAATCATGAACCTCTATACTGTAAAAATGGTTG
GGTAAGCCCAATGTTTTGTATAGACGTTTAAACTCCTGAACTTTATGGTTCAAAGGCCAC
ATTACTTCCGGAATGAATCCATGTTGAACATACAAACCGGGTGCCGGAAATTTAGAATCA
GGTTGATTAAGACATTTTCCAATTTCCACCTTATTCATAATTATCTGCTAACATCCCCGT
TAGTGTAATCCAAATCATGAATTATACCACGTGGGAAAGGGACGTTGTTCCCGGTCAGTT
CGACGATGTTGACGAAAGAGATGAAATGGTACAGATCCAGCGACTGAAATACGTTAAGGA
TGAAGATGGGAGTGAACTTCCGAGAGTTGGGAAGAAGGCCGAGTCAGATCCAGAAGACGA
GGAAGAAATGAACAGTTTCGATGAAAGATCTTATCAAGATTGGGATGAGTATTCCGATTT
CGTTGATAATCACACGGGATTTACTGGAAAGAAGCAGTTTGTTGGTGCCTGTCAGCCGAT
GGAAAAAACTCTATCCAAGTTTGCAGACAAAATCCATCTCGATGCGTACGAGCACCCGAG
CATTCCTTCTCATAATATTGCACAAGTGAGACAGTTGGACAAAAGAACGGTGCCGATAAA
GAACCGCGTGAAAGACAAGTCTGACCGAGCGACAGTAGAACAAGTGTTGGATCCAAGAAC
GAGAATAATTCTTTTCAAGATGCTCAGTCGTGGAATTATCAAAGAAATCAACGGAGTTAT
AAGCACTGGCAAAGAAGCAAATGTATATCATGCTACAACTCAACACGGAGAGGACAGGGC
ACTGAAAATTTACAAGACGTCAATCTTAACGTTCAAGGACAGAGACAGATATGTATCCGG
TGAATTCCGATTCAGGAGAGGGTACTGCAAGGGGAATCCTCGCAAGATGGTTGCCACCTG
GGCAGAGAAAGAGATGAGAAACCTAACAAGAATCCATCAGGCAGGCTTACCCAGCCCTCA
ACCGATAATGCTGAGAAGCCACGTTCTTCTGATGAGTTTCATCGGAACTAATGGATGGCC
TGCACCACTACTGAAAGATGCAGTCCTCTCAAGATCTAAATCTTGTCAGCTCTACCTAGA
GTGTATTCACATACTGAGGAGGATCTATCATGATTGCAAGCTAGTACACGCTGATTTCAG
CGAGTACAATTTGCTGTATCATGAAGGACAGCTCGTCGTTATCGACGTGTCGCAATCCGT
GGAACATGACCACCCTCATGCTATGGATTTTTTACGAAAGGACTGCAGCAACGTCAACGA
ATTTTTCAGGAAGAAAGAAGTTGCCGTAATGACTCTACGAGAGCTTTTCGATTTCGTCAC
TGATATCAACATCACTGAAAACAACATAGATGCTTACTTGGAAAACGCGATGATGAAAAC
ATCCGAGAGAACTCTGCAAAAAGAAAATTCAGATAACGAGATGGAATCAGCTAATTACGA
TGTGGAAGAGGAGGTTTTTAGACAAGTATTTATTCCACGAACTCTTGGACAGGTGGAAAA
CTTCGAGGAAGATATAGATGCCGTGCATATCACGGGAAAAGATCATCATATTGTATATCG
TACAGTTACCGGGTTGGATTCCAATCTCTGCCATGAGAAGGAAACGAATGAGGCTGATAC
CGGAGAAGGTTGCACGAGCGATAGCGAAGGGTCATCGCAGGATTATTGTGGCGAATCTCA
AGATGACTCGAGAGGTTGTCCGGTAATATGCACACGTAACATGAGTAAGGAAGAGAAGAA
AGAACATAAACTTCGAGTGAAGGAAGAAAATCGTGAGAAAAGAACCAAAAAAGTTCCCAA
ACATGCCTCGGTTTATAACCTGGTGAGTAAGTGCGGTGCGACTGTATTGAAGATATTAAA
TCAATATTACACAAAACAGCAGTATCAATATTCAATCGAAACGAATAATTTAAATCACAG
ACTACTACACAGTATCTGTCATAGCGACAACATTCAAAACAAGGATTGTTTGCCATAAAA
CCCGGAGAAGAAGAAAAATTACCTATTGAGATGGTCAGGCGTATTGATATTCAAGCTTTT
ATCGTATTACAGGATTCGGATTCGAATATGTGCGCGATCATATTTAAAAACACAATGTCT
CGCAACTAGCAGAACATCGCAATCACGTGATCATATTACGTCATGCTGA

InterProScan

PIRSF
Ser/Thr_kinase_Rio1 (IPR017407) - T[5-540] 1.7E-186
SMART
RIO_kinase (IPR000687) - T[140-376] 9.3E-122
SUPERFAMILY
Kinase-like_dom_sf (IPR011009) - T[154-208] 1.28E-23 - T[235-362] 1.28E-23
ProSitePatterns
RIO_kinase_CS (IPR018935) - T[309-320] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIOK1_HUMAN 54.267 % 485 2.45E-166
RIOK3_HUMAN 43.571 % 260 7.23E-80