Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 526

>Harore.CG.MTP2014.S130.g07320.01.p
MEKLHVDILRQNRVRLAKDLDLDELLQVLVQNKIITVLCVEKVLSEPTFFQKKVKFLNLL
PTRGPHAFTEFCSALVETDQTHLANILNQGQSSSDNPRCSFSSSFLLPTIPRKRTANSLS
PPIIPCNNHVVSSPQKATEAPNRAANIPAESEDCTLPYENETKPKRLFDPHCNLENLCSS
KTLEDLYSLAGILSSPLCNHAATQTTNHTMYNTQENNHNELLPAHSNQDVNESPMQLLCD
SPTSDSVIVKPCTPEFFSNHYMDCYPMFKGAKGLALIINVIDFEGSACLDKRTGSEKDSA
RMELLLKQLAYEVYQLDNGNAKEIWKTLKNFAAWSKHKKYESCFVVLMSHGDSGIIYGRD
GIAVKLDDIFALFSNANCPLLQNKPKVFLVQACRGEDPDQGVDEADGPASEEPPRNINCA
NNSSSITKNKLPNMSDFLIAYSTMPGYTAMRNEEDGSWFLKAFTQIAAYHAKNKSLLEIM
TLTNNQIKRREGWCPSSEFHRCKEMSVFESCLCKPLYFFPKLNILP

Nucleotide sequence

Length: 2,209

>Harore.CG.MTP2014.S130.g07320.01.t
CGTAACTCTACACAGCTCACTTTTACTATCAAGTTGTTTTTTATTGAGGGTTTCGAAACG
CACATCCTTGAATTTACGAAACTTGTAAAAAGTTGACGTAATTTAGAAATAATTTAGAAA
GCTTGAACATGCATGACCCACAATTCTGCTATAACATCCCATTTTTAAAGTCACGGGAAG
GTGGTGTTTGGGCTGGGTGTTTCCCTGGAAACCGTCACCCCATTTTCATTTTAAAACAAA
CCTTTTTCTATACTTACATTCCTTGTATATTCGTACAGTAACTGAGTGTGGATAAATATG
GAAAAATTGCATGTAGACATACTCCGACAAAACCGCGTTCGTCTAGCTAAAGATTTAGAT
CTGGACGAACTTCTTCAGGTGCTAGTGCAAAATAAGATCATCACGGTCTTGTGTGTTGAG
AAAGTGTTGTCGGAGCCTACATTCTTCCAGAAAAAGGTTAAATTTTTGAACTTATTGCCA
ACAAGGGGTCCACATGCTTTCACAGAATTCTGCTCAGCACTGGTTGAAACCGACCAAACT
CATCTCGCAAATATTCTCAATCAGGGACAATCTTCATCGGATAATCCCAGATGTTCATTC
TCTTCCTCTTTTTTATTACCAACGATTCCACGTAAACGTACTGCCAATAGCTTGTCTCCT
CCAATCATACCATGTAACAACCATGTAGTTTCAAGTCCACAAAAAGCCACTGAAGCTCCA
AACAGAGCTGCTAATATACCGGCAGAGAGTGAGGATTGTACTCTGCCTTATGAAAATGAA
ACTAAGCCTAAACGCCTATTTGACCCGCACTGCAATTTAGAAAATCTGTGTTCCAGTAAA
ACCCTGGAAGATCTATATTCTCTTGCTGGTATCTTGTCCTCTCCACTGTGTAACCATGCT
GCTACACAAACCACCAATCATACAATGTATAATACACAAGAAAACAATCATAATGAGCTA
CTGCCTGCTCATAGCAATCAAGATGTAAATGAATCACCAATGCAACTACTGTGTGACAGC
CCAACATCCGACTCTGTCATTGTGAAGCCATGTACACCAGAATTTTTCAGCAACCATTAC
ATGGATTGTTATCCTATGTTTAAAGGAGCCAAAGGACTGGCGCTTATCATTAATGTCATC
GATTTTGAGGGGTCTGCTTGCCTCGATAAAAGAACAGGTAGTGAGAAAGATTCTGCACGT
ATGGAGCTACTACTGAAACAGCTCGCGTATGAAGTGTACCAATTAGACAATGGTAATGCC
AAGGAAATCTGGAAAACATTGAAAAATTTTGCGGCCTGGTCAAAACACAAGAAATATGAG
AGCTGCTTTGTAGTTTTGATGAGCCATGGGGACTCCGGGATTATCTATGGAAGGGATGGT
ATAGCTGTCAAACTTGATGACATTTTCGCCCTGTTTTCTAATGCTAATTGCCCTCTTCTT
CAAAACAAACCTAAGGTATTCCTTGTACAAGCCTGCAGAGGAGAAGATCCTGATCAAGGA
GTGGATGAAGCCGATGGTCCTGCTTCAGAAGAGCCGCCACGAAACATCAATTGTGCTAAC
AATTCTTCATCCATTACGAAAAACAAATTGCCAAACATGTCTGATTTTCTCATTGCGTAT
AGTACAATGCCGGGGTACACAGCAATGCGTAATGAGGAAGACGGGAGCTGGTTTCTTAAA
GCTTTTACGCAGATTGCTGCATACCATGCCAAGAACAAGAGCCTCCTTGAGATTATGACC
TTAACCAACAATCAGATAAAACGACGGGAAGGCTGGTGCCCTTCCTCCGAATTTCACCGT
TGCAAAGAGATGTCTGTATTCGAATCTTGCCTATGCAAACCTCTTTACTTCTTTCCCAAA
CTCAATATTCTTCCGTGAAGAAAGACCAAGCAGAAACTGTGAATGGCATGAACAATAATA
ATTTTTGATACCTTCTTCCAGGACTGGTATAATTTGAAGTGTCTTATCAGTGGAAGACTA
TTTTTATATTTGAATCCTACTAGCTGTATTTGTATTGCTAAGTTGTACTAGCTGCCTTTT
AAATCAATCAATTTTTTTGTACCTGCAATGTACACCTAATTCATGGACAACAGTCTATTT
TATACCTGACTGGAATGTTATTTGCATGGATGATATTGTGATTTCTTCACATCAATTGTT
TTTTTTTTCAATTTACTGTTCATTTTAGGAATAAATTCAATGAAAAAAC

InterProScan

SMART	CARD (IPR001315) - T[1-89] 5.9E-13
SUPERFAMILY	DEATH-like_dom_sf (IPR011029) - T[1-96] 1.32E-22
PANTHER	Caspase_2 (IPR035702) - T[1-104] 3.4E-99 - T[168-521] 3.4E-99
ProSiteProfiles	CARD (IPR001315) - T[1-90] 17.437
Pfam	CARD (IPR001315) - T[7-88] 3.9E-12
SUPERFAMILY	Caspase-like_dom_sf (IPR029030) - T[249-521] 5.08E-76
SMART	Pept_C14A (IPR015917) - T[264-520] 1.2E-76
CDD	Pept_C14A (IPR015917) - T[264-519] 1.22865E-76
ProSiteProfiles	Pept_C14_p20 (IPR001309) - T[271-397] 43.27
PRINTS	Pept_C14A (IPR015917) - T[271-284] 6.1E-26 - T[292-310] 6.1E-26 - T[310-328] 6.1E-26 - T[343-351] 6.1E-26 - T[378-396] 6.1E-26 - T[449-460] 6.1E-26 - T[510-519] 6.1E-26
ProSitePatterns	Caspase_his_AS (IPR016129) - T[337-351] .
ProSitePatterns	Caspase_cys_AS (IPR033139) - T[384-395] .
ProSiteProfiles	Pept_C14_p10 (IPR002138) - T[427-520] 31.193