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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.192.v2....' > 
  2. Transcript 'KH2012:KH.C5.192.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S130.g05115.01.t

Possible name(s)

CNOT3

Gene model

Harore.CG.MTP2014.S130.g05115

Location

S130 [154,431 / 156,842]

Sequences

Amino acid sequence

Length: 761

>Harore.CG.MTP2014.S130.g05115.01.p
MGCSMVSWGYKLGSMADKRKLQGEIDRCLKKVQEGVETFEDIWQKLHHAANTNQKEKYES
DLKKEIKKLQRLRDQIKTWAASNEIKDKRTLLDNRKLIETQMERFKVVERETKTKAYSKE
GLGLAAKIDPAQKEKEDTMQWLQLTIDNLNRQIDVFESQIESTTSHSRKKKIDGEKQKVV
DELKGHLERHRYHIKNLETIMRMLDNGTIMCDRIAEIRDEVEYYADACDDPDFEENEFLY
EDLNLDEMLPTVNAATSPVEKQLNSSISNNSSRGDEDEVRMNHDASASGSPIPNSGHSSS
TSSHTSKEDVSEVKTRNRSLTSDDILSPRKNSQSSIPSASLPKPNPPRISLPKLNQKPSV
APHSQAYATAASIQQSHSNNHQQPLPDSQPASVIQTAAQPPLTISPTKLPTAKQQQKNIS
EKSSWQSINSDVSPSESYSSIESQNALNILVSSVTSASANPNNTNGLSVSASQERTNLHK
SILEASKDTVSVSKLVNILSSTSVANTSPSILSNTSSMQNGIPTSFSDSTFTSLKSIAEK
AVADAGLEQEGINYSLAYTSPDPSNMIITTTQSRSDLVSLNQQQQPGLMRQIPKGTGETR
MAPLLGVAPLGPLPLSKDNMYQQAMLEASWRHMPHPSDSERLRHYLPRNPCPTPMYYHQT
PLPHHDSIEFYLRLSTETLFFIFYYMEATKAQYLAARALKKQSWRFHTKYMMWFQRHEEP
KTITDEYEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRELQ

Nucleotide sequence

Length: 2,286

>Harore.CG.MTP2014.S130.g05115.01.t
ATGGGATGCAGCATGGTTTCATGGGGTTACAAACTAGGAAGTATGGCTGACAAGCGTAAA
CTGCAAGGCGAAATCGACAGATGTCTTAAAAAGGTTCAGGAAGGTGTGGAAACGTTTGAA
GATATTTGGCAGAAGCTTCACCATGCAGCCAACACGAATCAAAAAGAAAAATACGAAAGC
GATCTGAAAAAAGAGATAAAGAAATTACAGAGGTTACGTGATCAAATCAAAACGTGGGCG
GCATCTAATGAAATCAAAGACAAGAGAACATTACTTGACAACAGAAAACTCATAGAAACC
CAAATGGAGAGGTTTAAAGTCGTAGAACGAGAAACGAAAACAAAAGCATATTCAAAAGAA
GGTTTGGGACTGGCCGCAAAGATAGATCCTGCCCAGAAAGAAAAGGAAGACACTATGCAA
TGGCTTCAGCTAACAATCGACAACCTGAACAGACAGATTGACGTATTCGAAAGTCAGATA
GAGAGTACAACGTCACATTCAAGAAAAAAGAAAATCGACGGAGAGAAACAAAAAGTGGTT
GATGAATTGAAAGGTCATTTGGAAAGGCACAGATATCACATCAAAAACCTCGAGACCATC
ATGAGGATGCTGGATAATGGGACCATCATGTGCGACAGAATCGCAGAGATTCGAGACGAG
GTGGAGTATTACGCCGACGCTTGCGATGATCCCGACTTCGAGGAAAACGAATTCCTCTAT
GAGGATTTGAATCTGGATGAAATGCTTCCAACTGTGAACGCAGCAACTTCACCGGTGGAG
AAACAGCTCAATTCAAGCATAAGTAACAACAGTTCAAGAGGGGATGAGGATGAAGTCAGA
ATGAACCACGACGCCAGTGCATCAGGGTCACCCATTCCAAACAGTGGTCATTCGTCTTCT
ACTTCCAGTCACACCAGTAAAGAGGATGTTAGCGAAGTCAAAACCAGAAATAGGTCTCTC
ACTTCCGACGATATTTTGTCACCGAGAAAGAATTCTCAGTCATCGATACCTTCTGCCAGC
TTACCGAAACCAAATCCACCGAGAATTAGTTTACCGAAATTGAATCAAAAACCCAGTGTT
GCACCACATTCTCAAGCTTATGCGACAGCAGCAAGCATTCAGCAATCGCATTCTAACAAT
CACCAGCAGCCACTGCCCGACTCTCAACCCGCTTCGGTGATTCAAACAGCAGCGCAACCA
CCTTTGACCATATCGCCCACGAAACTCCCCACTGCTAAGCAACAGCAGAAAAATATCTCT
GAGAAATCTTCTTGGCAAAGCATCAACAGCGACGTTTCCCCATCAGAATCGTATTCTAGC
ATCGAAAGTCAAAATGCTCTGAATATCTTGGTGTCCTCTGTTACTTCAGCCAGTGCAAAC
CCCAATAACACAAACGGCTTATCGGTATCAGCATCGCAAGAAAGAACGAACCTGCATAAA
TCTATATTAGAAGCGTCGAAAGACACCGTGTCAGTGTCGAAGCTGGTCAATATTTTATCC
TCTACATCTGTCGCGAATACTTCCCCTTCTATTCTTTCCAATACGAGTAGTATGCAGAAT
GGAATCCCTACATCTTTCAGTGATAGCACCTTCACCAGCTTGAAGAGCATCGCTGAGAAA
GCTGTTGCGGATGCAGGGTTGGAGCAGGAGGGCATTAATTACTCCTTGGCTTACACGTCA
CCGGATCCAAGCAACATGATCATTACGACTACTCAGTCTCGCTCTGATTTGGTTTCTTTA
AATCAGCAACAACAACCCGGTCTGATGAGACAAATTCCAAAAGGGACTGGTGAGACAAGA
ATGGCACCTTTGCTTGGTGTGGCGCCGTTAGGACCGCTGCCACTAAGTAAAGATAACATG
TATCAGCAAGCCATGCTCGAAGCTTCGTGGAGACACATGCCACACCCTTCCGATTCGGAA
AGATTACGGCACTACCTGCCCAGAAACCCATGCCCTACTCCGATGTATTATCATCAAACT
CCTCTTCCCCACCACGACTCAATCGAGTTCTATCTACGTCTATCTACTGAAACGCTCTTT
TTTATTTTCTACTACATGGAGGCCACTAAGGCTCAGTATTTGGCTGCTAGAGCTTTGAAA
AAGCAATCGTGGAGGTTTCATACTAAGTACATGATGTGGTTCCAGCGACACGAAGAACCT
AAAACGATCACTGATGAATACGAGCAGGGAACGTATATCTATTTCGACTATGAAAAGTGG
GGGCAACGGAAGAAGGAGGGATTCACGTTCGAGTACAGATATCTTGAGGACAGAGAACTT
CAGTAA

InterProScan

PIRSF
CCR4-NOT_su3/5 (IPR012270) - T[15-761] 1.1E-210
Pfam
Not_N (IPR007207) - T[17-246] 7.4E-91
Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[611-756] 1.7E-66
Pfam
NOT (IPR007282) - T[630-755] 4.8E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT3_HUMAN 65.368 % 325 3.49E-100