- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g13786.02.t
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
S12 [674,552 / 680,265]
Amino acid sequence
Length: 441
>Harore.CG.MTP2014.S12.g13786.02.p
MLGPTDITVIVHKAKNLLIKGKSSNDAYATMEFGKTKYATNVIESSINPEWHQECQFEMP
SGGVLDKLFVTITIFNKQHGKFGLQNDDFIGQVEIPLSSIKCTDNKETTKWYNLQHRNPK
KEKKNRGQVEVSFKYLSKEKFALLPDKKSPLNLKNLKQKFRRRSEDEDSGVGYESNLRKG
QSLDNLHRTPSNSSDRSSNSKRRLSLVQSARGLVKFPNRIDLGNNSKSVSVEVLNNPEIH
RVSSLKRSSSGNGRQDITKQHVRNRSMPDTSLRALTSQGNDRNSPNICINGSHLYISGTD
SGNNSMNTSLECLQQNNSGFNRDTDIAELHASHNENQSNSRRGTYSPESSSSNLSILYKP
KKHYRLDVKELCKVSTIHEDATVAFQNMSRDKLLELCIKQHNTIAIERKQARQLEDYIDT
LLVKVMMLKPQILDRSTCTKM
Nucleotide sequence
Length: 2,267
>Harore.CG.MTP2014.S12.g13786.02.t
CGTACCCATGACGTCATGATATAAACTAGCTCATCACTTCATATAACAACTGGTGCTTGT
TGTTGTTGCTACGTTTTACTTGTTGTACAGAAACGATTTTTCTCGTATGTGCTATTCTTG
TTGTTTGAGGCAGTACTACTAATCGGCACTTAAAGGTAATCTGTATCAACTTATTAGCTA
CAGTGTACTGTCTGTCGTCGAGTTACGCTACGAAAGAAAACGACATAGCGTTTTTTCTCA
CGGAGTATTTGAGCTGTTTTGAATCCTAGTGCCAATAAGATGTTAGGTCCCACCGATATC
ACTGTCATAGTACATAAGGCAAAGAACCTTTTGATCAAAGGTAAATCCAGCAATGATGCC
TATGCCACTATGGAATTTGGCAAAACGAAATACGCTACGAACGTCATCGAATCTTCAATC
AATCCAGAATGGCATCAAGAATGTCAGTTCGAAATGCCATCAGGAGGAGTGCTCGACAAA
CTTTTTGTTACTATAACGATCTTCAACAAGCAGCATGGAAAATTCGGTCTTCAAAACGAT
GATTTTATTGGCCAGGTTGAAATTCCACTGAGTTCCATAAAATGCACAGATAACAAAGAA
ACAACAAAATGGTATAACCTACAGCATAGAAATCCTAAAAAAGAGAAGAAAAACAGAGGT
CAAGTGGAAGTCAGCTTCAAGTACTTGAGCAAAGAAAAGTTTGCCTTATTGCCCGATAAA
AAGAGTCCTCTGAATCTGAAAAATTTGAAGCAGAAATTTCGTCGTCGCTCGGAAGATGAA
GACTCCGGAGTCGGTTATGAAAGCAATCTTCGAAAAGGGCAATCTTTGGATAATTTACAC
CGCACACCGTCCAACTCCAGTGATAGATCGTCTAATTCAAAACGAAGGCTGTCTTTGGTC
CAATCTGCTAGAGGCCTGGTTAAATTTCCAAATAGAATCGATCTTGGCAACAACAGCAAG
TCTGTCAGCGTAGAAGTACTCAATAATCCTGAAATTCACAGGGTTTCATCCCTGAAGCGT
TCTAGTTCTGGTAATGGAAGACAAGACATTACAAAGCAGCATGTAAGGAATAGATCAATG
CCAGATACTTCCTTGCGTGCGCTGACCTCTCAAGGCAACGATAGAAACTCGCCAAACATA
TGTATAAATGGCTCGCACTTATATATTTCAGGGACAGATTCAGGTAACAACAGTATGAAT
ACTTCATTGGAATGCCTGCAACAGAATAACTCTGGCTTTAACCGGGACACAGACATCGCA
GAACTGCATGCATCACATAATGAAAATCAGTCTAATTCAAGACGTGGCACCTACTCACCG
GAGTCTTCGAGTTCTAACCTGTCTATTCTGTATAAGCCAAAAAAGCATTATAGACTTGAT
GTAAAAGAATTATGTAAGGTTTCTACCATTCACGAGGATGCTACAGTTGCTTTCCAGAAT
ATGAGTCGCGATAAACTTCTTGAGCTTTGTATTAAGCAACATAACACTATTGCCATAGAA
AGAAAACAAGCCAGACAACTCGAGGACTATATAGACACTCTTCTCGTCAAGGTAATGATG
CTGAAACCGCAAATATTGGATAGGTCCACGTGTACAAAGATGTAAAATTTATGAAACATG
CCTTCAGTTTCATGGAATTATAAAAGAACCAAGTGTTCTTTTTAAATGTTATGTTAAGGT
TATTATTTTTTGTGTTACAATTTCAATATATATCTTATATTTTGTAATCCCAATATGTTG
CAAAATAACCTAGAACTAATCATACTATTAAAGTAATCCTCATAATAAAGCAGTGTAGTA
CTAAAACAGATATATCAGAGTCATATCGAGACTTAACCAAATTTGGCCAAAACTGTGTAT
CTCCATTTTATTACTGTAAACTGTATATTCCTGTAAAAAGACAATCGAAGTTATCTGTAA
TTTTATATTTGAACTACACTTTACTTTATAACTTTATTTAAAACAATCCATCATGGTGTC
TGCTTCGTTCTTTCTTTTTTGAACATTGTTTTTTTTAGAGAGCTTTATACCGTTCATCCA
CAGGACGAATCTTATCTGTGTTTTCCTTTGTCATATGATATCCAGAGTGTGCTTTGCACA
AAACCAACTGCCCTTAATCTAATGACAGGTTATTAGATGCCAGCATTGTTTTAATTTTCT
TCAGTGCTATGTTGAAATTTTATTTACATTACCAAATGTTTTACTTTATGGCAATTGAAA
CTACTGTAAGTACGAAATAATTACTTTAATAAAACGTTTCCCTTTTA
| ProSiteProfiles |
C2_dom (IPR000008) - T[1-94] 11.389 |
| PANTHER |
FIP_classI (IPR037789) - T[4-326] 4.0E-51 - T[332-436] 4.0E-51 |
| Gene3D |
C2_domain_sf (IPR035892) - T[4-135] 7.5E-26 |
| SMART |
C2_dom (IPR000008) - T[6-109] 6.1E-14 |
| Pfam |
C2_dom (IPR000008) - T[7-114] 1.8E-19 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[389-433] 8.6E-7 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[408-435] 1.19E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 34.783 % | 85.5 | 1.12E-17 |