- Transcript 'KH2012:KH.C9.317.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g13786.01.t
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
S12 [674,831 / 679,603]
Amino acid sequence
Length: 439
>Harore.CG.MTP2014.S12.g13786.01.p
MLGPTDITVIVHKAKNLLIKGKSSNDAYATMEFGKTKYATNVIESSINPEWHQECQFEMP
SGGVLDKLFVTITIFNKQHGKFGLQNDDFIGQVEIPLSSIKCTDNKETTKWYNLQHRNPK
KEKKNRGQVEVSFKYLSKEKFALLPDKKSPLNLKNLKQKFRRRSEDEDSGVGYESNLRKG
QSLDNLHRTPSNSSDRSSNSKRRLSLVQSARGLVKFPNRIDLGNNSKSVSVEVLNNPEIH
RVSSLKRSSSGNGRQDITKQHVRNRSMPDTSLRALTSQGNDRNSPNICINGSHLYISDSG
NNSMNTSLECLQQNNSGFNRDTDIAELHASHNENQSNSRRGTYSPESSSSNLSILYKPKK
HYRLDVKELCKVSTIHEDATVAFQNMSRDKLLELCIKQHNTIAIERKQARQLEDYIDTLL
VKVMMLKPQILDRSTCTKM
Nucleotide sequence
Length: 1,320
>Harore.CG.MTP2014.S12.g13786.01.t
ATGTTAGGTCCCACCGATATCACTGTCATAGTACATAAGGCAAAGAACCTTTTGATCAAA
GGTAAATCCAGCAATGATGCCTATGCCACTATGGAATTTGGCAAAACGAAATACGCTACG
AACGTCATCGAATCTTCAATCAATCCAGAATGGCATCAAGAATGTCAGTTCGAAATGCCA
TCAGGAGGAGTGCTCGACAAACTTTTTGTTACTATAACGATCTTCAACAAGCAGCATGGA
AAATTCGGTCTTCAAAACGATGATTTTATTGGCCAGGTTGAAATTCCACTGAGTTCCATA
AAATGCACAGATAACAAAGAAACAACAAAATGGTATAACCTACAGCATAGAAATCCTAAA
AAAGAGAAGAAAAACAGAGGTCAAGTGGAAGTCAGCTTCAAGTACTTGAGCAAAGAAAAG
TTTGCCTTATTGCCCGATAAAAAGAGTCCTCTGAATCTGAAAAATTTGAAGCAGAAATTT
CGTCGTCGCTCGGAAGATGAAGACTCCGGAGTCGGTTATGAAAGCAATCTTCGAAAAGGG
CAATCTTTGGATAATTTACACCGCACACCGTCCAACTCCAGTGATAGATCGTCTAATTCA
AAACGAAGGCTGTCTTTGGTCCAATCTGCTAGAGGCCTGGTTAAATTTCCAAATAGAATC
GATCTTGGCAACAACAGCAAGTCTGTCAGCGTAGAAGTACTCAATAATCCTGAAATTCAC
AGGGTTTCATCCCTGAAGCGTTCTAGTTCTGGTAATGGAAGACAAGACATTACAAAGCAG
CATGTAAGGAATAGATCAATGCCAGATACTTCCTTGCGTGCGCTGACCTCTCAAGGCAAC
GATAGAAACTCGCCAAACATATGTATAAATGGCTCGCACTTATATATTTCAGATTCAGGT
AACAACAGTATGAATACTTCATTGGAATGCCTGCAACAGAATAACTCTGGCTTTAACCGG
GACACAGACATCGCAGAACTGCATGCATCACATAATGAAAATCAGTCTAATTCAAGACGT
GGCACCTACTCACCGGAGTCTTCGAGTTCTAACCTGTCTATTCTGTATAAGCCAAAAAAG
CATTATAGACTTGATGTAAAAGAATTATGTAAGGTTTCTACCATTCACGAGGATGCTACA
GTTGCTTTCCAGAATATGAGTCGCGATAAACTTCTTGAGCTTTGTATTAAGCAACATAAC
ACTATTGCCATAGAAAGAAAACAAGCCAGACAACTCGAGGACTATATAGACACTCTTCTC
GTCAAGGTAATGATGCTGAAACCGCAAATATTGGATAGGTCCACGTGTACAAAGATGTAA
| ProSiteProfiles |
C2_dom (IPR000008) - T[1-94] 11.389 |
| PANTHER |
FIP_classI (IPR037789) - T[4-324] 1.6E-51 - T[330-434] 1.6E-51 |
| Gene3D |
C2_domain_sf (IPR035892) - T[4-135] 7.4E-26 |
| SMART |
C2_dom (IPR000008) - T[6-109] 6.1E-14 |
| Pfam |
C2_dom (IPR000008) - T[7-114] 1.8E-19 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[387-431] 8.6E-7 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[406-433] 1.18E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 34.783 % | 85.9 | 9.56E-18 |