- Transcript 'KH2012:KH.C2.150.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g07550.01.t
Possible name(s)
FARP1; FARP2; FGD6
Gene model
Location
S12 [142,103 / 146,999]
Amino acid sequence
Length: 601
>Harore.CG.MTP2014.S12.g07550.01.p
MQIVYEEVKREVQETPTQVESSSPKVNLHSGGQESNEEDSPSASKLDPDNANIYANVVSG
NTSTQELKMVSVGDSQRHPTDQAYYIAKEFLTTERSYIKDLEVIDKWFKSTIEKENSTEG
IALMSEDFINQLFNMTNSLLSIHKQFKLELESRMVSWENSSHSPEEHNEDSMKQDIDDIM
QSQVQRIKKLYYLVESGEDLVRTIESACVDNEKFNKVCRDFELQKVCYIPITRFLLQPMQ
RVLHYEKLLQSLCSQYSADGVDLQHVSLKYALDSVTTLNGTLQSRLKEAHNFQKLAQLRH
DLIGVDNLLLNEKAFVREGSLYKLSRKGFQQRLFFLFSSCLLYTSKGVTSTNQFKVHGEL
PLQGMIIEINDSERAVPNCFSILSGAKTVVVAASTQEEMFKWIEDINFCINSSKDVTYNS
PLTAGDSDRPLSNQSMDQSDDSSSSRNSLDPSDKIQQQNSQQRTNTTMHVCWHRNTSVSA
NDYLISLQNQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDEFPLASLPLLGYSAT
APASIDNIQKEFVFKLQFKTHVYFFRAESEYTYSRWLEVIRSATASSKRVRLFSRLESIQ
K
Nucleotide sequence
Length: 1,806
>Harore.CG.MTP2014.S12.g07550.01.t
ATGCAAATTGTGTACGAAGAAGTGAAGAGAGAAGTTCAGGAGACTCCCACGCAAGTTGAA
TCCTCATCGCCCAAAGTCAATCTCCATTCTGGTGGCCAAGAGTCAAATGAGGAAGATTCG
CCATCTGCTTCCAAACTTGATCCTGATAATGCTAACATCTATGCCAATGTAGTAAGTGGC
AACACCAGTACACAAGAATTGAAAATGGTGTCTGTTGGAGATTCTCAAAGACATCCGACT
GATCAAGCTTACTACATTGCCAAGGAGTTTTTAACTACAGAAAGGAGCTATATCAAGGAT
TTGGAGGTTATTGATAAGTGGTTCAAATCTACCATTGAAAAAGAGAATTCAACAGAGGGA
ATTGCACTGATGTCAGAGGATTTCATCAATCAGCTTTTCAACATGACTAATTCACTGCTG
TCTATACACAAGCAATTCAAACTCGAATTGGAATCCCGTATGGTCTCCTGGGAGAATTCG
TCCCACTCTCCGGAAGAGCATAACGAGGATTCCATGAAGCAAGACATTGATGATATTATG
CAGTCTCAAGTTCAGCGAATCAAGAAACTGTACTATCTGGTTGAAAGCGGAGAAGATCTC
GTGAGAACGATCGAGAGTGCTTGCGTCGATAATGAGAAATTCAACAAGGTCTGCCGAGAT
TTCGAGCTGCAGAAAGTCTGCTACATTCCCATAACGAGATTTCTTCTGCAACCGATGCAA
CGTGTTCTCCACTATGAAAAGCTGTTGCAAAGTCTGTGCAGTCAGTATTCTGCAGATGGT
GTGGACCTGCAGCATGTCAGCTTGAAATATGCCTTAGATTCCGTTACAACACTCAACGGT
ACACTACAGTCACGGCTGAAGGAAGCGCACAATTTCCAGAAGCTAGCACAACTACGCCAT
GATTTGATTGGGGTTGACAATCTCTTGCTGAATGAGAAGGCGTTTGTTCGTGAAGGAAGC
TTGTACAAGCTTTCCAGGAAGGGATTTCAACAGCGATTATTTTTCCTGTTTTCGAGCTGT
CTGCTATACACAAGTAAAGGTGTCACTTCTACGAACCAATTCAAAGTGCACGGAGAACTG
CCACTTCAAGGAATGATAATTGAAATAAATGACAGCGAACGAGCTGTCCCCAACTGCTTC
AGTATTTTATCTGGTGCTAAGACCGTAGTCGTTGCTGCATCAACGCAAGAAGAGATGTTC
AAATGGATCGAGGATATAAACTTTTGCATCAATTCCAGCAAGGATGTCACTTATAATTCA
CCATTGACCGCAGGAGATTCTGACAGACCTCTTAGCAATCAGTCTATGGATCAGTCAGAT
GATTCGAGTTCTTCCAGAAATTCACTCGATCCAAGTGACAAGATTCAGCAGCAAAATTCG
CAACAGCGCACCAATACTACGATGCATGTTTGTTGGCACAGAAACACTAGTGTCAGTGCA
AATGACTACCTTATATCACTTCAAAATCAGTTGTCTGGTTATCTTCTGCGAAAATTCAAA
AATTCCAATGGATGGCAAAAACTCTGGGTTGTCTTTACAAACTTTTGTTTGTTTTTCTAC
AAATCTCATCAGGATGAGTTTCCTTTGGCTAGTCTTCCACTGCTTGGATATTCAGCTACA
GCTCCTGCTTCCATTGACAACATTCAAAAGGAATTTGTTTTCAAACTGCAGTTTAAGACC
CATGTATATTTTTTCCGTGCTGAAAGCGAATACACGTATTCCAGATGGCTTGAAGTTATT
CGTAGCGCGACTGCTTCGAGCAAGCGGGTTCGTCTGTTTAGTCGCCTAGAAAGTATTCAA
AAATGA
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[72-305] 8.37E-31 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[74-295] 5.6E-29 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[82-285] 20.385 |
| CDD |
DH-domain (IPR000219) - T[84-278] 8.60224E-23 |
| Pfam |
DH-domain (IPR000219) - T[86-279] 3.3E-23 |
| SMART |
DH-domain (IPR000219) - T[86-284] 1.5E-21 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[314-411] 14.073 - T[488-585] 13.733 |
| SMART |
PH_domain (IPR001849) - T[315-413] 2.4E-18 - T[489-587] 7.9E-17 |
| Pfam |
PH_domain (IPR001849) - T[316-410] 3.7E-11 - T[491-584] 1.9E-13 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[487-589] 7.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FARP2_HUMAN | 43.719 % | 485 | 4.63E-160 |
| FARP1_HUMAN | 47.664 % | 513 | 8.53E-171 |
| FGD6_HUMAN | 26.176 % | 128 | 7.86E-31 |