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TRANSCRIPT CARD

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  1. Clone 'cien202569'
  2. Clone 'cien203640'
  3. Transcript 'Boschl.CG.Botznik201...'
  4. Transcript 'KH2012:KH.C2.236.v2....'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S12.g07550.01.t

Possible name(s)

FARP1; FARP2; FGD6

Location

S12 [142,103 / 146,999]

Sequences

Amino acid sequence

Length: 601

>Harore.CG.MTP2014.S12.g07550.01.p
MQIVYEEVKREVQETPTQVESSSPKVNLHSGGQESNEEDSPSASKLDPDNANIYANVVSG
NTSTQELKMVSVGDSQRHPTDQAYYIAKEFLTTERSYIKDLEVIDKWFKSTIEKENSTEG
IALMSEDFINQLFNMTNSLLSIHKQFKLELESRMVSWENSSHSPEEHNEDSMKQDIDDIM
QSQVQRIKKLYYLVESGEDLVRTIESACVDNEKFNKVCRDFELQKVCYIPITRFLLQPMQ
RVLHYEKLLQSLCSQYSADGVDLQHVSLKYALDSVTTLNGTLQSRLKEAHNFQKLAQLRH
DLIGVDNLLLNEKAFVREGSLYKLSRKGFQQRLFFLFSSCLLYTSKGVTSTNQFKVHGEL
PLQGMIIEINDSERAVPNCFSILSGAKTVVVAASTQEEMFKWIEDINFCINSSKDVTYNS
PLTAGDSDRPLSNQSMDQSDDSSSSRNSLDPSDKIQQQNSQQRTNTTMHVCWHRNTSVSA
NDYLISLQNQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDEFPLASLPLLGYSAT
APASIDNIQKEFVFKLQFKTHVYFFRAESEYTYSRWLEVIRSATASSKRVRLFSRLESIQ
K

Nucleotide sequence

Length: 1,806

>Harore.CG.MTP2014.S12.g07550.01.t
ATGCAAATTGTGTACGAAGAAGTGAAGAGAGAAGTTCAGGAGACTCCCACGCAAGTTGAA
TCCTCATCGCCCAAAGTCAATCTCCATTCTGGTGGCCAAGAGTCAAATGAGGAAGATTCG
CCATCTGCTTCCAAACTTGATCCTGATAATGCTAACATCTATGCCAATGTAGTAAGTGGC
AACACCAGTACACAAGAATTGAAAATGGTGTCTGTTGGAGATTCTCAAAGACATCCGACT
GATCAAGCTTACTACATTGCCAAGGAGTTTTTAACTACAGAAAGGAGCTATATCAAGGAT
TTGGAGGTTATTGATAAGTGGTTCAAATCTACCATTGAAAAAGAGAATTCAACAGAGGGA
ATTGCACTGATGTCAGAGGATTTCATCAATCAGCTTTTCAACATGACTAATTCACTGCTG
TCTATACACAAGCAATTCAAACTCGAATTGGAATCCCGTATGGTCTCCTGGGAGAATTCG
TCCCACTCTCCGGAAGAGCATAACGAGGATTCCATGAAGCAAGACATTGATGATATTATG
CAGTCTCAAGTTCAGCGAATCAAGAAACTGTACTATCTGGTTGAAAGCGGAGAAGATCTC
GTGAGAACGATCGAGAGTGCTTGCGTCGATAATGAGAAATTCAACAAGGTCTGCCGAGAT
TTCGAGCTGCAGAAAGTCTGCTACATTCCCATAACGAGATTTCTTCTGCAACCGATGCAA
CGTGTTCTCCACTATGAAAAGCTGTTGCAAAGTCTGTGCAGTCAGTATTCTGCAGATGGT
GTGGACCTGCAGCATGTCAGCTTGAAATATGCCTTAGATTCCGTTACAACACTCAACGGT
ACACTACAGTCACGGCTGAAGGAAGCGCACAATTTCCAGAAGCTAGCACAACTACGCCAT
GATTTGATTGGGGTTGACAATCTCTTGCTGAATGAGAAGGCGTTTGTTCGTGAAGGAAGC
TTGTACAAGCTTTCCAGGAAGGGATTTCAACAGCGATTATTTTTCCTGTTTTCGAGCTGT
CTGCTATACACAAGTAAAGGTGTCACTTCTACGAACCAATTCAAAGTGCACGGAGAACTG
CCACTTCAAGGAATGATAATTGAAATAAATGACAGCGAACGAGCTGTCCCCAACTGCTTC
AGTATTTTATCTGGTGCTAAGACCGTAGTCGTTGCTGCATCAACGCAAGAAGAGATGTTC
AAATGGATCGAGGATATAAACTTTTGCATCAATTCCAGCAAGGATGTCACTTATAATTCA
CCATTGACCGCAGGAGATTCTGACAGACCTCTTAGCAATCAGTCTATGGATCAGTCAGAT
GATTCGAGTTCTTCCAGAAATTCACTCGATCCAAGTGACAAGATTCAGCAGCAAAATTCG
CAACAGCGCACCAATACTACGATGCATGTTTGTTGGCACAGAAACACTAGTGTCAGTGCA
AATGACTACCTTATATCACTTCAAAATCAGTTGTCTGGTTATCTTCTGCGAAAATTCAAA
AATTCCAATGGATGGCAAAAACTCTGGGTTGTCTTTACAAACTTTTGTTTGTTTTTCTAC
AAATCTCATCAGGATGAGTTTCCTTTGGCTAGTCTTCCACTGCTTGGATATTCAGCTACA
GCTCCTGCTTCCATTGACAACATTCAAAAGGAATTTGTTTTCAAACTGCAGTTTAAGACC
CATGTATATTTTTTCCGTGCTGAAAGCGAATACACGTATTCCAGATGGCTTGAAGTTATT
CGTAGCGCGACTGCTTCGAGCAAGCGGGTTCGTCTGTTTAGTCGCCTAGAAAGTATTCAA
AAATGA

InterProScan

SUPERFAMILY
DBL_dom_sf (IPR035899) - T[72-305] 8.37E-31
Gene3D
DBL_dom_sf (IPR035899) - T[74-295] 5.6E-29
ProSiteProfiles
DH-domain (IPR000219) - T[82-285] 20.385
CDD
DH-domain (IPR000219) - T[84-278] 8.60224E-23
Pfam
DH-domain (IPR000219) - T[86-279] 3.3E-23
SMART
DH-domain (IPR000219) - T[86-284] 1.5E-21
ProSiteProfiles
PH_domain (IPR001849) - T[314-411] 14.073 - T[488-585] 13.733
SMART
PH_domain (IPR001849) - T[315-413] 2.4E-18 - T[489-587] 7.9E-17
Pfam
PH_domain (IPR001849) - T[316-410] 3.7E-11 - T[491-584] 1.9E-13
Gene3D
PH-like_dom_sf (IPR011993) - T[487-589] 7.0E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FARP2_HUMAN 43.719 % 485 4.63E-160
FARP1_HUMAN 47.664 % 513 8.53E-171
FGD6_HUMAN 26.176 % 128 7.86E-31