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  1. Transcript 'KH2012:KH.C13.99.v2....'
  2. Transcript 'Harore.CG.MTP2014.S2...'
  3. Transcript 'KH2012:KH.L153.36.v1...'
  4. Transcript 'Cisavi.CG.ENS81.R9.3...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S12.g07344.01.t

Possible name(s)

FARP1; FARP2; FRMD7

Location

S12 [149,601 / 155,685]

Sequences

Amino acid sequence

Length: 805

>Harore.CG.MTP2014.S12.g07344.01.p
MQNLCPKIIIVMPSAKAIRVLMLDDTENSYEVKPASFGNALLQAIMKDLDILESDYFGAT
YDNGEGSISFLDPLRQINRQIKHINNTVLHFVVKFFPPDPCQMEEEYTRYMFALQVKRDI
NSGILPCVENTALKMASYIVQAEFGDWNAVECSDTSYLQNLKIFPNPNQEQLQTISNHHT
KLIGQSPSEADYNLLDIARRLDHYGIRMHAALDHENSSINLAVSSTGIIVFQGNMKINSF
NWSRIRKLSFKRKRFLVKLRADTAQQSETCGDVLVFIMKNRNCCKDFWRLCIEHHAFFRL
EIRPRPKPKPLILSRGSSFHYSGKTQKELLELVRNSNFRRSNFVRTTSRRRVQNSTSTSA
LPLDRKKILDQLNAVENINKSNNSAQQENVTSPSGSSLHTENSFQAREQTDTYQKNDSTT
TAEVMPYEDDVTQAEWQLESKSLHSSATPITDEKIQQEPQEMKGNLPVDLVDMENGPETR
AEELDIVPNRKHPDIQTSSISSFNNSTSNNVDNKQFTKNDSNVTSALRNGTAKIVRNALS
EYFCDTAAKGVGDFVVPMQAHVPPPLPPKERQLSNEGTYDNVSNDSKVSQQGESTDKYVS
SSGIQQIGDRQVKDPFVNDSVVNLAGICPTTPEINARIGELKIRTGHYSVPKKPPPPSEE
NHILKWDRQHSDREIDEAMRQLYNVIGKRDSYDDTNSDNEQDLEEGDEDGLEYIITESKE
DTVDGTPCREDPLLAPIKMEFNDDFSFKTTVLREAWNKPNCSSIPNFVRYPTTHPQLSPK
LSMVTYHIIKVLTRPVMHMSPNIEY

Nucleotide sequence

Length: 2,418

>Harore.CG.MTP2014.S12.g07344.01.t
ATGCAAAATCTTTGTCCTAAAATCATCATCGTCATGCCCAGTGCAAAAGCAATTCGAGTT
CTCATGCTCGACGATACTGAAAACTCATATGAAGTCAAGCCGGCAAGCTTTGGAAATGCT
TTGCTCCAAGCTATAATGAAAGATCTAGATATTTTGGAATCTGATTACTTTGGAGCGACA
TATGATAATGGCGAAGGTTCGATATCTTTTCTGGACCCGTTGCGGCAAATTAATCGACAA
ATCAAACATATCAACAACACTGTGCTGCACTTTGTTGTGAAATTTTTCCCACCCGATCCA
TGTCAGATGGAAGAGGAGTATACCAGATATATGTTTGCTCTTCAGGTCAAGCGAGACATT
AACTCTGGAATACTGCCATGTGTCGAAAATACTGCATTAAAAATGGCTTCTTATATTGTA
CAAGCTGAATTCGGCGACTGGAATGCTGTCGAGTGTTCCGATACATCCTATCTACAAAAT
CTGAAAATCTTCCCTAATCCAAATCAAGAGCAGTTACAGACGATATCTAATCATCATACA
AAATTGATTGGACAAAGCCCTTCAGAAGCCGATTACAATTTGCTGGACATCGCTCGTCGA
CTGGATCATTACGGAATTCGAATGCACGCCGCTCTGGATCATGAAAATTCCAGTATCAAT
CTTGCTGTGTCTAGTACTGGGATTATAGTATTCCAGGGCAATATGAAAATCAACTCATTT
AACTGGTCGAGAATACGAAAACTAAGTTTCAAACGTAAAAGATTTCTTGTCAAGTTAAGA
GCAGACACAGCACAACAGAGCGAGACCTGTGGCGATGTCCTCGTCTTCATCATGAAAAAT
AGGAACTGTTGCAAGGATTTTTGGCGGCTTTGTATTGAGCATCACGCCTTTTTTCGTTTG
GAAATTCGCCCCCGGCCGAAACCGAAGCCATTGATTTTATCTAGAGGATCTTCATTCCAT
TACAGTGGCAAAACACAGAAGGAACTTTTAGAGTTGGTCCGAAACAGTAACTTCCGGCGA
TCGAATTTCGTCCGAACCACCAGTCGCAGAAGAGTGCAGAATTCGACATCGACAAGTGCC
CTTCCATTGGACAGGAAGAAAATTCTTGATCAGCTCAATGCAGTTGAAAACATCAATAAG
AGTAACAATTCAGCACAGCAAGAAAATGTAACATCGCCATCAGGGAGCTCATTGCACACA
GAAAATTCCTTTCAAGCAAGAGAACAAACTGATACTTATCAGAAAAATGACTCAACAACT
ACTGCCGAGGTCATGCCATATGAGGACGACGTCACTCAAGCAGAATGGCAGCTTGAGAGT
AAGAGTTTGCACAGTAGCGCCACACCTATCACTGACGAAAAGATTCAACAAGAACCACAG
GAAATGAAAGGTAACTTGCCCGTTGATTTAGTTGATATGGAAAATGGACCAGAGACAAGA
GCTGAAGAGCTGGACATTGTACCCAACAGGAAACATCCTGACATTCAGACTAGCTCTATT
TCTTCTTTTAATAATTCTACTTCAAATAATGTTGATAATAAGCAGTTTACTAAAAATGAC
AGTAATGTGACAAGTGCATTGCGAAACGGCACGGCTAAAATTGTTAGGAATGCGTTATCC
GAATACTTCTGCGATACCGCCGCAAAAGGAGTTGGTGATTTTGTCGTCCCAATGCAGGCT
CATGTCCCACCGCCTTTACCCCCAAAAGAAAGGCAGTTGAGTAACGAGGGTACTTACGAC
AATGTGTCGAACGATTCCAAAGTGTCACAACAAGGAGAAAGCACAGATAAGTATGTGAGT
AGTAGTGGAATACAGCAAATAGGTGATAGGCAAGTGAAAGATCCATTTGTTAATGACAGC
GTAGTTAATCTAGCCGGGATTTGTCCCACCACGCCCGAAATAAATGCCAGAATTGGGGAG
CTGAAAATAAGAACTGGGCATTACTCGGTTCCTAAGAAACCTCCTCCTCCTTCAGAGGAA
AATCATATTTTGAAATGGGACAGACAGCACTCAGACAGGGAGATAGACGAAGCCATGAGA
CAGCTTTATAATGTGATCGGCAAGCGAGACTCCTATGATGATACCAACAGCGATAATGAA
CAAGATCTGGAAGAGGGTGATGAAGATGGCTTGGAGTATATCATCACAGAAAGTAAAGAA
GACACTGTTGATGGCACCCCTTGTCGAGAGGACCCACTCCTTGCCCCAATTAAAATGGAA
TTTAATGACGATTTTTCATTCAAAACCACTGTATTACGCGAAGCATGGAATAAACCTAAC
TGTTCCTCTATACCAAATTTTGTTAGATATCCGACCACTCATCCACAACTCAGTCCCAAG
TTAAGCATGGTAACCTACCACATCATTAAAGTACTAACACGTCCAGTCATGCATATGAGT
CCAAATATAGAGTATTAA

InterProScan

SMART
Band_41_domain (IPR019749) - T[12-209] 1.5E-37
ProSiteProfiles
FERM_domain (IPR000299) - T[16-302] 65.146
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[18-98] 5.17E-15
Pfam
FERM_N (IPR018979) - T[20-82] 7.9E-7
PRINTS
Ez/rad/moesin-like (IPR000798) - T[29-48] 9.4E-7 - T[80-99] 9.4E-7 - T[123-144] 9.4E-7 - T[212-232] 9.4E-7 - T[596-617] 9.4E-7
PRINTS
Band_41_domain (IPR019749) - T[49-61] 1.8E-14 - T[114-127] 1.8E-14 - T[127-147] 1.8E-14 - T[189-205] 1.8E-14
Gene3D
FERM/acyl-CoA-bd_prot_sf (IPR014352) - T[95-203] 3.9E-31
SUPERFAMILY
FERM_2 (IPR035963) - T[98-204] 2.36E-26
Pfam
FERM_central (IPR019748) - T[102-209] 6.2E-14
CDD
FERM_central (IPR019748) - T[108-201] 1.17375E-24
Gene3D
PH-like_dom_sf (IPR011993) - T[204-301] 1.8E-33
SMART
FERM_PH-like_C (IPR018980) - T[213-306] 7.8E-32
Pfam
FERM_PH-like_C (IPR018980) - T[213-301] 2.5E-23
SMART
FERM-adjacent (IPR014847) - T[310-356] 6.5E-12
Pfam
FERM-adjacent (IPR014847) - T[313-352] 4.2E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FARP2_HUMAN 44.571 % 322 4.1E-96
FARP1_HUMAN 44.186 % 311 6.37E-92
FRMD7_HUMAN 45.593 % 296 2.81E-89