- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g07344.01.t
Possible name(s)
FARP1; FARP2; FRMD7
Gene model
Location
S12 [149,601 / 155,685]
Amino acid sequence
Length: 805
>Harore.CG.MTP2014.S12.g07344.01.p
MQNLCPKIIIVMPSAKAIRVLMLDDTENSYEVKPASFGNALLQAIMKDLDILESDYFGAT
YDNGEGSISFLDPLRQINRQIKHINNTVLHFVVKFFPPDPCQMEEEYTRYMFALQVKRDI
NSGILPCVENTALKMASYIVQAEFGDWNAVECSDTSYLQNLKIFPNPNQEQLQTISNHHT
KLIGQSPSEADYNLLDIARRLDHYGIRMHAALDHENSSINLAVSSTGIIVFQGNMKINSF
NWSRIRKLSFKRKRFLVKLRADTAQQSETCGDVLVFIMKNRNCCKDFWRLCIEHHAFFRL
EIRPRPKPKPLILSRGSSFHYSGKTQKELLELVRNSNFRRSNFVRTTSRRRVQNSTSTSA
LPLDRKKILDQLNAVENINKSNNSAQQENVTSPSGSSLHTENSFQAREQTDTYQKNDSTT
TAEVMPYEDDVTQAEWQLESKSLHSSATPITDEKIQQEPQEMKGNLPVDLVDMENGPETR
AEELDIVPNRKHPDIQTSSISSFNNSTSNNVDNKQFTKNDSNVTSALRNGTAKIVRNALS
EYFCDTAAKGVGDFVVPMQAHVPPPLPPKERQLSNEGTYDNVSNDSKVSQQGESTDKYVS
SSGIQQIGDRQVKDPFVNDSVVNLAGICPTTPEINARIGELKIRTGHYSVPKKPPPPSEE
NHILKWDRQHSDREIDEAMRQLYNVIGKRDSYDDTNSDNEQDLEEGDEDGLEYIITESKE
DTVDGTPCREDPLLAPIKMEFNDDFSFKTTVLREAWNKPNCSSIPNFVRYPTTHPQLSPK
LSMVTYHIIKVLTRPVMHMSPNIEY
Nucleotide sequence
Length: 2,418
>Harore.CG.MTP2014.S12.g07344.01.t
ATGCAAAATCTTTGTCCTAAAATCATCATCGTCATGCCCAGTGCAAAAGCAATTCGAGTT
CTCATGCTCGACGATACTGAAAACTCATATGAAGTCAAGCCGGCAAGCTTTGGAAATGCT
TTGCTCCAAGCTATAATGAAAGATCTAGATATTTTGGAATCTGATTACTTTGGAGCGACA
TATGATAATGGCGAAGGTTCGATATCTTTTCTGGACCCGTTGCGGCAAATTAATCGACAA
ATCAAACATATCAACAACACTGTGCTGCACTTTGTTGTGAAATTTTTCCCACCCGATCCA
TGTCAGATGGAAGAGGAGTATACCAGATATATGTTTGCTCTTCAGGTCAAGCGAGACATT
AACTCTGGAATACTGCCATGTGTCGAAAATACTGCATTAAAAATGGCTTCTTATATTGTA
CAAGCTGAATTCGGCGACTGGAATGCTGTCGAGTGTTCCGATACATCCTATCTACAAAAT
CTGAAAATCTTCCCTAATCCAAATCAAGAGCAGTTACAGACGATATCTAATCATCATACA
AAATTGATTGGACAAAGCCCTTCAGAAGCCGATTACAATTTGCTGGACATCGCTCGTCGA
CTGGATCATTACGGAATTCGAATGCACGCCGCTCTGGATCATGAAAATTCCAGTATCAAT
CTTGCTGTGTCTAGTACTGGGATTATAGTATTCCAGGGCAATATGAAAATCAACTCATTT
AACTGGTCGAGAATACGAAAACTAAGTTTCAAACGTAAAAGATTTCTTGTCAAGTTAAGA
GCAGACACAGCACAACAGAGCGAGACCTGTGGCGATGTCCTCGTCTTCATCATGAAAAAT
AGGAACTGTTGCAAGGATTTTTGGCGGCTTTGTATTGAGCATCACGCCTTTTTTCGTTTG
GAAATTCGCCCCCGGCCGAAACCGAAGCCATTGATTTTATCTAGAGGATCTTCATTCCAT
TACAGTGGCAAAACACAGAAGGAACTTTTAGAGTTGGTCCGAAACAGTAACTTCCGGCGA
TCGAATTTCGTCCGAACCACCAGTCGCAGAAGAGTGCAGAATTCGACATCGACAAGTGCC
CTTCCATTGGACAGGAAGAAAATTCTTGATCAGCTCAATGCAGTTGAAAACATCAATAAG
AGTAACAATTCAGCACAGCAAGAAAATGTAACATCGCCATCAGGGAGCTCATTGCACACA
GAAAATTCCTTTCAAGCAAGAGAACAAACTGATACTTATCAGAAAAATGACTCAACAACT
ACTGCCGAGGTCATGCCATATGAGGACGACGTCACTCAAGCAGAATGGCAGCTTGAGAGT
AAGAGTTTGCACAGTAGCGCCACACCTATCACTGACGAAAAGATTCAACAAGAACCACAG
GAAATGAAAGGTAACTTGCCCGTTGATTTAGTTGATATGGAAAATGGACCAGAGACAAGA
GCTGAAGAGCTGGACATTGTACCCAACAGGAAACATCCTGACATTCAGACTAGCTCTATT
TCTTCTTTTAATAATTCTACTTCAAATAATGTTGATAATAAGCAGTTTACTAAAAATGAC
AGTAATGTGACAAGTGCATTGCGAAACGGCACGGCTAAAATTGTTAGGAATGCGTTATCC
GAATACTTCTGCGATACCGCCGCAAAAGGAGTTGGTGATTTTGTCGTCCCAATGCAGGCT
CATGTCCCACCGCCTTTACCCCCAAAAGAAAGGCAGTTGAGTAACGAGGGTACTTACGAC
AATGTGTCGAACGATTCCAAAGTGTCACAACAAGGAGAAAGCACAGATAAGTATGTGAGT
AGTAGTGGAATACAGCAAATAGGTGATAGGCAAGTGAAAGATCCATTTGTTAATGACAGC
GTAGTTAATCTAGCCGGGATTTGTCCCACCACGCCCGAAATAAATGCCAGAATTGGGGAG
CTGAAAATAAGAACTGGGCATTACTCGGTTCCTAAGAAACCTCCTCCTCCTTCAGAGGAA
AATCATATTTTGAAATGGGACAGACAGCACTCAGACAGGGAGATAGACGAAGCCATGAGA
CAGCTTTATAATGTGATCGGCAAGCGAGACTCCTATGATGATACCAACAGCGATAATGAA
CAAGATCTGGAAGAGGGTGATGAAGATGGCTTGGAGTATATCATCACAGAAAGTAAAGAA
GACACTGTTGATGGCACCCCTTGTCGAGAGGACCCACTCCTTGCCCCAATTAAAATGGAA
TTTAATGACGATTTTTCATTCAAAACCACTGTATTACGCGAAGCATGGAATAAACCTAAC
TGTTCCTCTATACCAAATTTTGTTAGATATCCGACCACTCATCCACAACTCAGTCCCAAG
TTAAGCATGGTAACCTACCACATCATTAAAGTACTAACACGTCCAGTCATGCATATGAGT
CCAAATATAGAGTATTAA
| SMART |
Band_41_domain (IPR019749) - T[12-209] 1.5E-37 |
| ProSiteProfiles |
FERM_domain (IPR000299) - T[16-302] 65.146 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[18-98] 5.17E-15 |
| Pfam |
FERM_N (IPR018979) - T[20-82] 7.9E-7 |
| PRINTS |
Ez/rad/moesin-like (IPR000798) - T[29-48] 9.4E-7 - T[80-99] 9.4E-7 - T[123-144] 9.4E-7 - T[212-232] 9.4E-7 - T[596-617] 9.4E-7 |
| PRINTS |
Band_41_domain (IPR019749) - T[49-61] 1.8E-14 - T[114-127] 1.8E-14 - T[127-147] 1.8E-14 - T[189-205] 1.8E-14 |
| Gene3D |
FERM/acyl-CoA-bd_prot_sf (IPR014352) - T[95-203] 3.9E-31 |
| SUPERFAMILY |
FERM_2 (IPR035963) - T[98-204] 2.36E-26 |
| Pfam |
FERM_central (IPR019748) - T[102-209] 6.2E-14 |
| CDD |
FERM_central (IPR019748) - T[108-201] 1.17375E-24 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[204-301] 1.8E-33 |
| SMART |
FERM_PH-like_C (IPR018980) - T[213-306] 7.8E-32 |
| Pfam |
FERM_PH-like_C (IPR018980) - T[213-301] 2.5E-23 |
| SMART |
FERM-adjacent (IPR014847) - T[310-356] 6.5E-12 |
| Pfam |
FERM-adjacent (IPR014847) - T[313-352] 4.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FARP2_HUMAN | 44.571 % | 322 | 4.1E-96 |
| FARP1_HUMAN | 44.186 % | 311 | 6.37E-92 |
| FRMD7_HUMAN | 45.593 % | 296 | 2.81E-89 |