- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g04658.01.t
Possible name(s)
SLC6A11; SLC6A12; SLC6A6
Gene model
Location
S12 [127,252 / 128,488]
Amino acid sequence
Length: 214
>Harore.CG.MTP2014.S12.g04658.01.p
MCDTTNRYMNDSGSIPDTMSNGTDKKQRGEVKRDTWSKKVDFAFSIAGGFVGLGNVWRFP
YLCFKNGGGAFLIPYVIFVAIGSLPVFFLEVTVGQYTNTGSLLAWKIAPLMKGIGVAVNI
INYHLNVYYAVILAWSLRYFVASMSSALPWSTCDNEWNTENCFVFGSKTGAMNVTGIANK
TTVENFTLAITTNVTAGGNGLSTGRISSVVEYWQ
Nucleotide sequence
Length: 645
>Harore.CG.MTP2014.S12.g04658.01.t
ATGTGTGATACGACAAATCGCTATATGAATGATTCCGGTTCAATACCAGATACCATGTCA
AACGGAACCGATAAGAAGCAGAGAGGTGAAGTCAAACGCGATACTTGGTCAAAGAAAGTT
GATTTCGCATTTTCAATAGCTGGAGGATTTGTTGGCCTTGGAAATGTTTGGCGATTTCCC
TATTTGTGTTTCAAGAATGGTGGTGGCGCCTTTCTCATACCGTACGTTATCTTCGTAGCC
ATTGGGTCTTTACCGGTATTTTTCCTCGAAGTAACTGTTGGCCAATACACTAACACAGGC
AGTTTATTGGCATGGAAAATAGCCCCTTTAATGAAAGGTATCGGAGTCGCTGTCAACATC
ATTAACTACCATCTCAATGTGTATTACGCGGTCATTTTGGCTTGGTCTCTGCGCTACTTT
GTCGCATCCATGTCCTCGGCTTTGCCATGGTCAACATGTGATAATGAATGGAACACTGAA
AATTGCTTTGTTTTCGGATCGAAAACTGGTGCTATGAATGTTACCGGAATTGCAAACAAA
ACCACTGTCGAAAATTTTACTCTGGCAATAACAACTAACGTCACTGCGGGAGGTAATGGG
TTATCCACTGGAAGAATTTCTTCCGTTGTGGAATACTGGCAGTAA
| PANTHER |
Na/ntran_symport (IPR000175) - T[20-176] 4.5E-73 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[32-214] 30.306 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[33-200] 1.44E-53 |
| Pfam |
Na/ntran_symport (IPR000175) - T[33-172] 2.1E-60 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[41-62] 4.1E-28 - T[70-89] 4.1E-28 - T[113-139] 4.1E-28 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[57-71] . - T[139-159] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A12_HUMAN | 51.351 % | 172 | 1.66E-50 |
| S6A11_HUMAN | 46.448 % | 177 | 2.97E-52 |
| SC6A6_HUMAN | 47.236 % | 175 | 1.75E-51 |
