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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S127.g12776.01.t

Possible name(s)

ERICH3; NLRC3

Gene model

Harore.CG.MTP2014.S127.g12776

Location

S127 [229,850 / 233,345]

Sequences

Amino acid sequence

Length: 1,138

>Harore.CG.MTP2014.S127.g12776.01.p
MSHIDPGPLATYESLADPHLTGYFNNTRMRKHLRRMGLITTTGAIVSEDVFRLNNSRKEH
QRHIRDVLAQAIIHKALDMERHRQMHIKKQLEEIGKVERVRRVRTERALRGDEAVLPLLS
PRPSKKKYHRPRSSPEKREKVPILQTVTDQRMEGMSEDPYYMNSAKKKAEYPNVEVDNQH
LYNLDREALRAFTLNLSNFDLGSGVSPYNVPVLDQKSRPTKVRSRRPATATGVVHRGKVD
GGLGRPKSNVRSLHLHRREPPMMYHTQIHTLCKVTFKYLGKMVHLDHEEEDPRDEVMVMQ
QHCGGENLCIFKKLIMKGDKFTLVSRRHRTFPFSLTFYLNGIQVERLSTCCEYKHKPGHK
LGAKSSHFGFIKTEGSQPCFRCLIMQGKLKTKSDPTPPPTGRPSKPTRRRPKKEKKLEGV
ERSSESSESKSNEVHSDVQHDAGNPMIYSESSSEVSSDSESTISDVSASDEDRSDDVSSG
SDSTAKDKDESDTSDSFSEAESVESIKKVEPAKVTMVKKDDVSKAEKSKVKNKLGDGKIK
KNSSKSSSSSSESDEAAKVEKGDGLKAIIKKKYPSDKKNKKRVSKSSSSSSESESELPIT
NKKSHAAKETRQKKDRPSDKKKVKKAGSKSSSSSTGSDRKKVTMMKKEDVRDNPEKTTPE
KKVSSKSSSSSSESHVKKAATLKKEPNTKMQDEEKVKKSTSSTSSESHYSSGKETKKKRS
VDSNTLEILPDLTDATSNVDKDSSDIGEKERKRTKTLTSSEYSESSSSSDSESVRENIEK
RPVAETKQDSQKSGIIEPTSNTKKSKSAVSFKDESSSSSSESSTHSNKYKGSILPLIKGK
TFVDLSNIKLDSDQCGELTKYFRESLSLLQVEKVILSGCNIDDKTGKKILKLLSMAKKIK
ILDLGGNKFTDNCIELLLDICQKNPVEDLSIDHNPLKNEGCESLIDGLLKSQTSAVTAQL
QKRVSQSLIASVLRDSKQEISDEYKHEMSSTSSASSFTSSAVSDNIILKTLNISHTGAGS
SAFEKIGSYLALHPGLRELDISGNTINHESLEAVLNPLGEGNNPNLKYLRINKASLDDKA
AKIIHDKLAATARLYELSLTGNKFTEEGKQKLSEYQDNNASLGKLQLEEDISTYQEKK

Nucleotide sequence

Length: 3,417

>Harore.CG.MTP2014.S127.g12776.01.t
ATGAGTCATATAGATCCAGGACCGCTTGCGACTTACGAAAGTCTCGCTGACCCCCATTTA
ACAGGCTATTTTAACAATACTCGTATGAGGAAACATTTAAGGAGGATGGGGTTAATAACT
ACCACGGGTGCAATCGTATCAGAAGACGTATTCAGATTGAACAATTCCAGGAAGGAGCAT
CAGCGTCATATTCGTGATGTGCTTGCACAAGCTATAATACATAAGGCACTGGACATGGAA
AGGCACAGACAAATGCACATTAAGAAACAACTGGAAGAAATTGGTAAAGTTGAGAGGGTT
CGCAGAGTAAGAACCGAACGAGCACTTCGTGGTGACGAAGCCGTTCTTCCTCTTCTTTCG
CCAAGACCCAGCAAAAAGAAATACCACAGGCCGCGTTCTTCTCCTGAAAAACGAGAAAAG
GTGCCGATACTGCAGACGGTGACAGATCAGAGAATGGAAGGTATGTCTGAGGACCCGTAC
TACATGAACTCGGCCAAAAAAAAAGCTGAGTACCCAAACGTTGAGGTAGATAACCAACAT
CTGTACAATCTAGACAGAGAGGCACTTCGTGCATTCACGCTTAACTTGTCTAATTTTGAT
TTGGGTAGTGGAGTCAGTCCTTACAATGTACCAGTGCTTGATCAGAAAAGCCGGCCAACC
AAGGTAAGAAGTCGCAGGCCAGCCACGGCTACTGGAGTGGTCCATCGTGGTAAAGTAGAT
GGTGGACTGGGTAGACCCAAGAGCAATGTTAGATCGCTCCACCTGCATCGGAGAGAGCCG
CCTATGATGTACCATACTCAGATTCATACGCTTTGCAAAGTGACTTTCAAATATCTCGGT
AAAATGGTGCATCTTGACCATGAGGAGGAGGATCCTAGGGATGAAGTGATGGTAATGCAG
CAACATTGTGGTGGAGAAAACCTTTGCATATTCAAAAAACTCATCATGAAAGGAGATAAG
TTCACATTGGTTTCTAGAAGGCATCGCACATTCCCTTTCAGCCTCACTTTCTATCTCAAT
GGCATACAAGTGGAAAGGCTCAGTACTTGTTGTGAGTATAAGCACAAACCTGGCCACAAG
CTTGGCGCCAAATCTAGTCACTTTGGCTTCATCAAAACCGAAGGTTCTCAGCCATGCTTT
CGTTGCTTGATTATGCAGGGAAAGCTTAAAACTAAGTCGGACCCCACTCCTCCTCCGACC
GGACGTCCTAGCAAACCCACAAGGAGAAGGCCAAAGAAAGAAAAGAAACTGGAAGGAGTG
GAGCGATCCAGTGAAAGTTCTGAGTCTAAATCTAACGAGGTTCATTCAGATGTCCAACAT
GATGCTGGTAATCCAATGATATACTCGGAATCTTCTTCCGAGGTTTCTTCGGATTCTGAA
AGTACGATTAGTGATGTTAGCGCTAGTGATGAGGACAGAAGTGATGACGTTTCCTCAGGA
AGCGACTCCACGGCCAAAGATAAGGATGAAAGTGATACCTCCGATTCATTTTCTGAAGCA
GAGAGTGTTGAATCTATTAAGAAAGTAGAGCCAGCAAAGGTTACAATGGTGAAAAAGGAT
GATGTGTCCAAAGCGGAGAAAAGTAAGGTGAAAAATAAACTTGGCGATGGAAAGATTAAA
AAAAACTCATCTAAATCTTCATCTAGTTCATCAGAATCTGATGAAGCGGCTAAAGTGGAA
AAGGGAGACGGATTAAAGGCAATAATAAAAAAGAAATATCCAAGCGACAAAAAGAATAAA
AAACGTGTCTCGAAGTCCTCATCAAGCTCATCAGAATCTGAATCAGAACTTCCTATTACA
AATAAAAAGAGTCATGCAGCAAAGGAAACAAGACAGAAAAAAGATCGTCCTAGTGATAAA
AAGAAGGTTAAAAAAGCTGGATCTAAATCTTCATCAAGCTCAACAGGATCTGACCGCAAG
AAAGTGACAATGATGAAAAAAGAAGACGTGCGGGATAATCCAGAGAAAACAACTCCTGAA
AAGAAAGTTTCCTCAAAGTCTTCATCAAGCTCATCAGAATCTCATGTTAAAAAAGCAGCC
ACATTGAAAAAGGAGCCAAATACAAAGATGCAAGATGAAGAGAAGGTTAAGAAGAGTACT
TCATCAACCTCATCTGAATCTCATTATTCTAGCGGCAAAGAAACGAAGAAAAAACGATCA
GTAGACAGCAATACACTTGAGATATTGCCAGATTTGACTGACGCCACATCTAATGTAGAT
AAAGACAGCAGCGACATAGGTGAAAAAGAACGCAAAAGAACCAAAACGCTAACATCTTCT
GAATATTCTGAATCTTCTTCGTCTTCAGATTCAGAGAGTGTAAGAGAGAACATAGAAAAA
CGTCCAGTTGCGGAGACGAAACAGGATTCGCAAAAGTCCGGTATTATTGAGCCAACTTCA
AACACAAAAAAAAGTAAATCTGCAGTTTCATTCAAAGATGAGAGTTCATCTAGTAGTAGT
GAAAGCTCGACACATTCAAACAAATACAAAGGATCTATTTTACCGCTGATCAAGGGTAAA
ACATTTGTCGACTTGAGCAACATAAAACTGGATTCTGATCAATGTGGAGAGCTTACTAAA
TACTTCAGGGAAAGTCTGTCTTTACTGCAAGTAGAAAAAGTCATCTTAAGTGGATGTAAC
ATCGATGACAAAACCGGGAAAAAAATTCTTAAGTTACTTTCCATGGCAAAAAAGATAAAA
ATTCTCGATTTAGGAGGCAATAAATTTACTGATAACTGTATTGAATTGCTGCTCGATATT
TGCCAGAAAAATCCGGTGGAAGATTTAAGCATCGACCATAACCCTCTCAAGAACGAAGGC
TGCGAAAGTCTGATAGATGGGTTACTCAAGTCTCAGACTTCGGCCGTTACCGCGCAACTG
CAGAAACGTGTTTCTCAAAGTCTAATCGCGTCCGTCTTGAGAGATTCAAAACAAGAAATC
TCAGACGAGTACAAACATGAAATGTCCAGCACATCGAGTGCATCCAGCTTTACGTCATCA
GCAGTTTCTGATAACATCATCCTGAAAACGCTTAACATCTCGCATACAGGTGCTGGAAGT
TCAGCTTTTGAAAAAATTGGATCGTACTTAGCACTTCACCCAGGACTTCGAGAGCTTGAT
ATAAGCGGAAACACTATTAATCATGAATCCCTAGAAGCGGTATTGAATCCGTTGGGTGAA
GGGAACAACCCTAATCTAAAATATCTGAGAATAAATAAAGCATCTCTCGACGATAAGGCT
GCAAAAATAATCCATGACAAGCTTGCTGCCACAGCTAGGCTTTATGAGCTCAGTCTAACA
GGAAATAAATTTACGGAGGAAGGGAAACAGAAACTTTCTGAATATCAAGACAATAATGCA
TCTCTGGGTAAACTCCAGCTTGAAGAAGACATCAGTACATATCAGGAGAAAAAATAA

InterProScan

PANTHER
DUF4590 (IPR027962) - T[1-816] 2.5E-128
Pfam
DUF4590 (IPR027962) - T[284-395] 4.3E-48
Gene3D
LRR_dom_sf (IPR032675) - T[832-958] 1.4E-13 - T[986-1138] 6.2E-17
Pfam
Leu-rich_rpt (IPR001611) - T[1036-1053] 0.97

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ERIC3_HUMAN 35.862 % 267 3.2E-73