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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S124.g06884.01.t

Possible name(s)

NAV1; NAV2; NAV3

Location

S124 [85,564 / 89,929]

Sequences

Amino acid sequence

Length: 919

>Harore.CG.MTP2014.S124.g06884.01.p
MRNIKMKPFCYAPQENELSKLRRAIEDQRIKAERVDVLGKPQTNAESVYNFPTSSNNVNN
SASSPGTENAYPVFVSPDHDHWSSSAASVSGHINSNSTLTRSNVDNLSPNSSINKRVSSG
SLSSVSSHISGSSSSTGSSGPEIEAAMKQGKKKRWLPLKSAFSKGSKSQSSSQPDLLDSE
DSGCPLSPTLGRRLTHHNGSVGSSSESEAIQELLQIVQEKERKLTDVRLEALTSQHQIHL
LREQITQMQHEMQLLRLENERLQGAANLGSANSSSEERIYSPTHGSTKNYKSLHRPSSTN
VLTTIGSLEKTTSRGVTCRSVSCTQSPVTSPFHRPQYIDHASPSISTSMPPALDYCNLQN
TLSPESENEGFQVKFVVTSSSTMLPGKRSIVIGSLPVPRRASWEELDRVTQSIFTEYCRV
VDGDTRLGLSSDSIDHYDVGELKREIGGKVPALLPCAYIVGDVDTVEIKLKDASSGSVDQ
MSFDILISRETLECYLSILLHSRRIVLQGPSGTGKTAFAMSLAEYMVTRLRSEGGNTMVA
VIDAKQDGEEKLQRYLADISSRSKRVDSPSVPAVLIVENLHLMTSLTNTLEQLSSLSGNA
SKSPYIIGTMQEGDYENLTSNQDFRTISCGSGSAHAQRYLTRALRRSLVEHVLTVPQTRN
GENGKLSSIVLWIPLCWQHINRFLETQNLHHSVLGAKLFTKCPINVSSSCSWFVGIWNQT
VIPYLASELSTKSHNESQTWEDPTKWVLNSFPWDTSETGIDPIRSLERLRPWKYDSKPLP
KCPNENDTIDGDYDDVQLPPPPLPVRSTYSDPHISSFQSRPGLNRNTYSCKQNGTVGSQS
SCNNNSNSRVQNSPWHKASASASHSPAPTNQTRQYSNDGTVYNKPKTYRPENGKNPAKDP
LKDMLAQLQHAALNPSEDY

Nucleotide sequence

Length: 2,760

>Harore.CG.MTP2014.S124.g06884.01.t
ATGAGAAACATAAAAATGAAACCTTTTTGTTACGCACCACAGGAAAATGAACTGAGTAAA
CTAAGACGAGCGATCGAAGACCAAAGAATCAAGGCTGAGAGGGTTGATGTACTCGGCAAA
CCGCAAACAAACGCTGAGAGTGTATATAACTTTCCTACAAGTTCAAACAACGTTAATAAC
TCTGCTAGCTCACCGGGAACTGAAAACGCCTACCCTGTATTCGTATCGCCTGACCACGAC
CACTGGTCAAGCTCCGCTGCTTCAGTAAGCGGGCACATTAATTCAAATTCCACACTGACA
AGAAGTAACGTAGATAATCTTTCTCCGAACTCGTCGATCAATAAACGAGTATCATCTGGA
AGTTTATCCAGCGTAAGTTCACATATCAGCGGTTCGTCTTCCAGCACGGGCAGCAGCGGG
CCAGAAATTGAAGCCGCCATGAAACAGGGAAAGAAGAAAAGATGGCTTCCACTGAAGTCA
GCATTTTCAAAAGGAAGCAAATCTCAATCTTCATCTCAACCCGATCTCCTAGATAGCGAA
GATTCAGGGTGTCCTCTCTCGCCAACGTTAGGAAGACGGCTAACACATCATAATGGAAGT
GTGGGGTCGTCATCCGAATCCGAAGCGATCCAGGAGCTCCTACAGATCGTCCAAGAGAAG
GAACGAAAACTGACTGACGTGCGTCTCGAAGCATTAACATCACAACATCAAATTCATCTG
CTCAGAGAGCAAATTACTCAAATGCAGCATGAAATGCAACTTCTGCGATTGGAGAACGAG
CGCCTCCAGGGAGCGGCAAATTTAGGAAGTGCGAATAGCAGTAGCGAAGAAAGAATATAT
TCGCCAACACACGGTTCGACGAAGAACTACAAATCCCTACATAGGCCATCTTCAACAAAC
GTTTTAACGACGATTGGTTCGTTGGAAAAGACCACCTCCAGAGGTGTCACTTGTCGGTCT
GTAAGTTGCACCCAATCTCCTGTTACTTCACCATTCCATCGTCCACAGTACATTGACCAC
GCGTCCCCAAGTATAAGTACGTCAATGCCACCTGCATTGGATTACTGCAATCTCCAAAAC
ACCTTATCACCAGAAAGTGAGAACGAGGGCTTTCAGGTAAAATTTGTCGTCACAAGTTCA
AGTACAATGCTGCCCGGGAAAAGATCAATTGTTATAGGGTCACTACCAGTCCCTCGCAGA
GCGTCATGGGAAGAACTGGATCGAGTGACACAAAGCATATTCACGGAATATTGTCGAGTT
GTGGACGGAGACACGCGCCTTGGATTGTCGTCTGACAGCATCGATCACTATGACGTCGGA
GAGTTGAAAAGAGAAATAGGAGGAAAAGTGCCAGCACTTTTACCATGTGCCTACATAGTA
GGAGATGTTGACACAGTAGAAATCAAATTAAAAGATGCTTCAAGCGGCAGCGTAGACCAG
ATGTCGTTTGACATCCTAATATCTCGCGAAACGCTGGAGTGCTATTTATCAATTTTGCTT
CACAGCAGACGGATCGTTCTACAAGGTCCTTCTGGGACAGGTAAAACAGCATTTGCAATG
AGTTTGGCCGAATACATGGTGACAAGATTACGAAGTGAAGGTGGCAATACAATGGTTGCG
GTGATCGATGCTAAGCAGGACGGAGAAGAAAAGCTACAGCGCTATCTAGCGGATATATCA
TCGCGATCTAAGCGAGTCGATTCTCCTTCGGTCCCAGCGGTTTTAATCGTGGAAAACTTA
CATTTGATGACATCTCTAACGAACACATTGGAACAGTTGTCGTCCCTATCTGGTAACGCG
TCAAAAAGTCCATATATTATTGGCACAATGCAAGAGGGAGATTATGAAAATTTAACTTCA
AATCAGGATTTCAGAACAATTTCTTGCGGAAGTGGGAGCGCACATGCGCAAAGATATTTG
ACAAGAGCCCTGAGGCGCTCATTGGTGGAACACGTTCTAACTGTACCTCAAACCCGAAAC
GGCGAAAATGGCAAACTTTCCAGTATTGTTTTGTGGATTCCTTTATGCTGGCAACATATT
AACAGGTTCTTGGAAACGCAAAACCTCCATCACTCAGTTTTAGGCGCAAAACTATTTACG
AAATGTCCGATAAACGTGTCCAGTTCGTGTTCTTGGTTTGTGGGTATTTGGAATCAAACT
GTTATACCATATTTGGCTTCGGAATTATCGACCAAGTCTCATAACGAATCGCAAACGTGG
GAAGATCCGACCAAATGGGTTCTAAACAGTTTTCCCTGGGATACGAGCGAAACTGGGATC
GATCCAATAAGATCGCTGGAAAGACTACGACCGTGGAAATACGACAGTAAACCGTTACCG
AAATGTCCGAATGAAAATGACACTATCGACGGAGATTACGATGATGTACAGTTGCCACCG
CCTCCTCTACCGGTCAGATCCACATACAGCGACCCTCACATATCCTCCTTCCAGTCACGA
CCGGGGCTCAACAGAAACACGTATTCCTGCAAACAAAACGGAACGGTAGGATCTCAATCC
AGCTGCAATAATAACAGCAACTCTCGGGTACAAAACAGCCCGTGGCATAAAGCAAGCGCG
TCAGCGTCGCACAGTCCGGCACCAACTAACCAAACAAGACAGTATAGTAACGACGGTACT
GTGTATAACAAACCTAAAACCTACAGGCCTGAAAATGGGAAAAATCCTGCAAAGGACCCG
TTAAAAGATATGTTAGCGCAGTTACAACATGCGGCGCTCAATCCAAGCGAGGATTACTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[496-614] 7.31E-8
SMART
AAA+_ATPase (IPR003593) - T[501-650] 4.1E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NAV2_HUMAN 33.485 % 318 1.72E-91
NAV3_HUMAN 36.165 % 274 1.07E-76
NAV1_HUMAN 27.474 % 216 1.52E-57