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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Transcript 'KH2012:KH.C1.1007.v1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S2...' > 
  4. Transcript 'Haaura.CG.MTP2014.S2...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S123.g09589.01.t

Possible name(s)

RDH11; RDH12; RDH13

Gene model

Harore.CG.MTP2014.S123.g09589

Location

S123 [24,992 / 26,956]

Sequences

Amino acid sequence

Length: 353

>Harore.CG.MTP2014.S123.g09589.01.p
SYLTESSRCTEQKKTDLHSIRYTAFLFPENLKEFMANKSSRVTPMDKAKVKSAKGTWVRS
DVCLKGKTAIITGANTGIGFETALDLAKRQARIIIACRNVEKGQAARDEICTESGSPEIY
FKQLDLSSFSSIRKFADEINESEDRLDILINNAGIMMCPKSKTEDGIEMHFGVNHLGHFL
LTNLLLDLIKKSAPSRIITLSSVMHTKRYNAYIHWDDLNLDKSYFPRDAYSQSKLMNVMF
SSELSKILTGTGVTTYCVHPGLVRTNLLQNVGTNTSCWDLLFSLATKSTKIFWKTPRHGA
QTSIYCAIAPELECETGKYYADCKEKSVGRGARDDEEAKKLWQISEQLTAVSK

Nucleotide sequence

Length: 1,063

>Harore.CG.MTP2014.S123.g09589.01.t
GTCATATTTAACTGAATCCAGTCGCTGTACTGAGCAAAAAAAAACAGATTTGCACAGCAT
TAGATATACAGCATTTCTATTTCCAGAAAACCTTAAGGAATTCATGGCTAATAAGAGTTC
TCGTGTGACCCCGATGGATAAGGCAAAAGTAAAATCAGCCAAAGGTACTTGGGTAAGAAG
TGATGTTTGTCTAAAAGGAAAGACGGCGATTATAACGGGAGCAAACACAGGAATCGGTTT
TGAGACTGCTCTGGATTTAGCAAAGCGTCAAGCTAGAATTATAATAGCATGTCGAAACGT
AGAAAAAGGACAAGCAGCAAGAGACGAGATATGCACTGAAAGCGGATCGCCGGAAATTTA
TTTCAAACAACTTGACTTGTCTTCCTTTAGTTCTATTAGAAAGTTTGCTGATGAAATCAA
TGAATCTGAGGATAGACTTGATATTCTCATTAATAATGCAGGAATCATGATGTGTCCAAA
GTCGAAAACAGAAGACGGAATTGAAATGCATTTCGGTGTGAATCATCTTGGACACTTTCT
CCTGACAAATCTTTTGCTCGATTTGATAAAGAAAAGCGCCCCGAGTCGTATCATTACGTT
GTCGTCTGTCATGCACACGAAAAGATACAATGCGTATATTCACTGGGATGATCTAAATTT
GGATAAGTCATATTTCCCAAGAGATGCGTACAGTCAAAGCAAACTGATGAATGTGATGTT
CTCTAGTGAGCTGAGCAAAATCTTGACTGGTACGGGTGTAACTACATACTGCGTACACCC
AGGTTTAGTAAGAACCAATCTTCTACAAAATGTCGGCACTAATACATCTTGCTGGGACTT
GCTCTTCAGTTTGGCTACAAAATCAACAAAAATATTCTGGAAGACACCGCGTCACGGCGC
GCAAACCTCGATATATTGCGCCATAGCGCCGGAGTTGGAATGTGAGACGGGAAAATATTA
TGCGGACTGCAAAGAAAAATCAGTAGGTCGTGGAGCAAGAGATGACGAGGAAGCGAAAAA
ATTATGGCAAATTAGCGAACAATTAACCGCTGTTTCGAAGTGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[64-325] 8.0E-58
Pfam
SDR_fam (IPR002347) - T[67-211] 1.1E-26
PRINTS
SDR_fam (IPR002347) - T[68-85] 4.3E-14 - T[144-155] 1.3E-5 - T[144-155] 4.3E-14 - T[189-205] 4.3E-14 - T[195-203] 1.3E-5 - T[230-249] 1.3E-5 - T[251-268] 4.3E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 48.601 % 254 3.84E-83
RDH13_HUMAN 49.324 % 251 1.19E-81
RDH12_HUMAN 49.158 % 263 1.68E-86