- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S11.g03954.01.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S11 [634,861 / 639,747]
Amino acid sequence
Length: 492
>Harore.CG.MTP2014.S11.g03954.01.p
MPASYAQLVCLLNKSNMSNGDCSSASTGWLQESLKDNDEQVYTIIRKEKERQRSGLELIA
SENFTSAAVSQALGSCLTNKYSEGYPGTRYYGGNEYIDELERLCKRRALNLYNLNKDDWA
VNVQPYSGSPANFAVFTAVVGPHGRIMGLDLPDGGHLTHGFMTEKRKISATSIFFESMPY
KVDQKTGLIDYDILEENSKLFKPKVIIAGVSCYSRNLDYKRMRKIADDCNAYLMADMAHI
SGLVAAQVVPSPFEYCDIVTTTTHKTLRGPRAGVIFSRKGVRKYNAKGEPAEMYDLEKPI
NDAVFPGLQGGPHNHQIAGIAIALKQAMTKEFIDYQKQVIVNARHMANKLINLGYDIVCG
GTDNHLMLLNLKNKGTDGNRADKVLEAMGVACNKNACPGDKSALRPSGLRLGTPALTSRG
FTETEFDKVVDFIDRGIKLTLEIQELIGQQAPFQDFKDKLYKDEVIVAKVKAIKAEVSEF
ASVFPLPGLADI
Nucleotide sequence
Length: 1,889
>Harore.CG.MTP2014.S11.g03954.01.t
ATGCCAGCAAGCTATGCTCAGTTGGTTTGTTTACTGAATAAAAGCAACATGAGTAACGGT
GATTGCAGCAGCGCCAGCACAGGCTGGCTTCAAGAATCCCTCAAAGATAACGACGAACAA
GTTTACACGATTATTAGGAAAGAAAAAGAAAGACAGAGATCTGGACTGGAGCTGATCGCG
TCTGAAAATTTCACAAGCGCAGCGGTTTCGCAAGCTCTTGGATCGTGTCTTACCAATAAA
TATTCGGAAGGGTACCCAGGCACCAGGTATTATGGAGGTAATGAATACATTGATGAACTA
GAAAGACTTTGCAAAAGGCGAGCTTTGAATTTGTACAATCTAAACAAGGATGATTGGGCC
GTAAACGTTCAACCTTATTCAGGATCACCTGCAAACTTTGCAGTTTTTACAGCTGTTGTC
GGCCCACATGGCAGAATTATGGGACTGGACCTCCCAGACGGCGGTCATCTGACTCACGGT
TTCATGACAGAGAAGAGGAAGATATCTGCTACCTCTATATTTTTTGAATCCATGCCGTAT
AAAGTCGACCAAAAAACTGGCTTAATCGATTACGATATCCTCGAAGAAAACTCTAAACTG
TTCAAACCGAAGGTAATCATCGCTGGAGTAAGCTGTTACTCTAGAAACCTGGACTATAAA
CGGATGCGAAAAATTGCTGATGACTGCAATGCTTACCTTATGGCTGACATGGCACATATC
AGCGGCCTCGTGGCAGCGCAAGTTGTGCCTTCTCCATTTGAGTACTGTGACATTGTTACC
ACGACAACTCACAAAACGTTACGTGGACCTCGTGCTGGTGTTATATTCTCAAGGAAGGGT
GTACGAAAGTACAATGCAAAAGGAGAGCCAGCTGAAATGTATGACCTGGAGAAACCTATC
AATGACGCTGTGTTTCCCGGGCTTCAAGGTGGCCCTCATAATCACCAGATAGCCGGTATT
GCTATAGCTTTGAAGCAAGCAATGACTAAAGAGTTCATTGACTATCAGAAACAGGTGATT
GTCAATGCACGTCACATGGCCAACAAACTGATTAATCTTGGTTACGATATTGTTTGTGGT
GGAACAGACAACCACTTGATGCTTCTTAATTTGAAAAACAAGGGAACCGATGGCAACAGA
GCCGATAAGGTGTTGGAAGCAATGGGAGTTGCATGCAATAAAAATGCATGTCCAGGAGAT
AAATCTGCCCTTCGACCAAGCGGACTGCGTTTAGGGACACCTGCTTTGACATCACGTGGA
TTCACTGAGACTGAATTTGATAAAGTCGTTGATTTCATTGACAGGGGCATCAAACTGACA
CTGGAAATACAAGAGCTTATCGGGCAACAGGCACCATTCCAGGACTTCAAGGACAAACTA
TACAAAGATGAGGTCATTGTGGCAAAGGTCAAGGCAATAAAGGCAGAAGTATCAGAATTT
GCTAGTGTGTTTCCTCTACCTGGATTGGCAGATATTTAATCATGCGATCTATGCAATGTA
CCATTTTCTTTGTACGGTATAACATTGTGTTATGATTTCTGCTTTGTAGCAGTTGCCTTA
TTGCAATATAGTTGTTGTAGATTCTAAACTACTAATATATCACTGCTTTACCTAATGGCA
AACTGAACAACGATACCAGTACGAAATATTTATGCATTGTTATCTGCGTGCACCTTTTCA
AAATGATTTACCTCCGATTTAAGTGGTATGTTTGTTTGTTTCAATATTTGGTTCAGTTAA
CCTGTTTAATAAAGATAAAGAGATTCTTCATGTTATATCAACACTTCACACAGCGAAGTA
GGAAGTGGTGTTGCATGTTAGTGTGAAATTGCGTGAGTGAATACTTTTAACCTTGTATTT
CAAAGATGTGGATTTCCTCAAACAGGCAG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[13-491] 6.2E-176 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[25-488] 4.34E-181 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[33-488] 43.122 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[35-446] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[38-62] 6.3E-212 - T[338-487] 6.3E-212 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[63-337] 6.3E-212 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[257-273] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 67.932 % | 649 | 0 |
| GLYM_HUMAN | 58.193 % | 587 | 0 |