- Transcript 'Harore.CG.MTP2014.S1...' >
- Clone 'ciad059n21' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S11.g03083.01.t
Possible name(s)
ZEB1; ZEB2; ZNF232
Gene model
Location
S11 [178,543 / 197,246]
Amino acid sequence
Length: 993
>Harore.CG.MTP2014.S11.g03083.01.p
MLCSPQNINCDKENSFFDVTRKTLKNLSLKKPDYLLLNHGIEHLLAGNRLPQRPPSNEEN
TESFSRVEDNMIISAQLSSDALYRKSASANENNSNSAFDSTDHATPRLNANFLQRLHGPS
TRTTADGRVRESEKEEMSAKNYILQHYLNSWKAHQQLLLNSQQQTLSDRDTESEEKPTTE
IQAPDSPVRSPPPLMRFPQPSPNYGGEFQRTPNSPRSQEIRREKTFSPPSALDIFNRNNN
NGVFAAGLPAMNAMAVAYPALLQQQLYQIALASAASGGKVPQHSPFRFPETNVREPNASK
NSFSDSCEEQSEPLDLTAPKSRRQSDSKSSPPPPPAQPQPLFNPLQAAAAKDFPGFNNMA
AMMYNMQRLVQSGTMSPTAIAELMGNLAAYNFPVMPYKQQREQHVSSPTAQNQRAKLSPS
VFSPTPNKLANYGRYPETLPTPAYAPELSAALAVRCHYPNPFTSFGYPRGFPSSSLIPPY
GPVPCRRGRPKKRSYGEASPNGFPGGYNPLELSEVAAKYRRSDKSIANAPHPSVFGPSGP
SSVDPSRSAKDFIAGRSPATTMSYKCDICDKSFQKQSSLTRHKYEHTGKRPHHCNICGKS
FKHKHHLIEHQRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPEDTMMQELRQQL
KKSNSAKANFDNSTVVTSTPDKATDISTGGKQRSWEMKNISDERSDASKTAELARQALYF
NSAYNVSDSANTDGYSPRFSQAGVVTVMPRSPDDPEPGTVPNAESNASVFSPGSEKQSEE
DVRRSISHDSAIYTDRTGITERGSIGSETAAAFSSLTPIKKANDNSEERASDDDSRDHGF
HETAEKPSRTFRSPSSGSSIGSPISPRSACIPTTSSATVMHIPVASEYERSKEELVKKLE
TMASNMLYRRSQRDRMNETDAWQKRRIPYVLFFFQFSLTTVLTIKLFQILPFFEYYFLVC
STLACCVSFPMYIGLPHSVYRSYACCRAFFLSL
Nucleotide sequence
Length: 3,127
>Harore.CG.MTP2014.S11.g03083.01.t
CGAAGGCTCAAGTTGACGACCTTTTTCAGTATCAACAAGCGACAGCTCTAGCCGCGATAG
TAGGAAATGTAAAGTGGGATGGACTACAAAACTCGGCGATAAACATGACTGCTCAAAACA
GGATAGGATCTCAGGACTGCATCGGATGTTGTGCAGTCCGCAAAATATTAACTGCGACAA
AGAGAATAGTTTCTTTGATGTAACGCGAAAAACACTCAAGAATTTAAGTCTGAAAAAACC
CGACTATCTCCTGTTAAACCACGGTATCGAACACTTGCTTGCCGGAAACAGACTGCCTCA
GAGACCGCCAAGCAACGAAGAAAACACCGAATCATTTTCTCGGGTTGAAGACAATATGAT
CATCAGCGCCCAGTTATCCTCCGACGCCTTGTACCGGAAGAGCGCTTCGGCCAATGAAAA
TAATTCCAACAGCGCTTTCGATTCCACAGATCATGCGACCCCTCGTTTGAACGCCAACTT
CCTTCAGCGACTCCATGGTCCTTCTACACGGACAACCGCCGACGGTCGAGTGAGGGAAAG
TGAGAAAGAAGAAATGAGTGCAAAAAATTACATTCTTCAGCACTATCTCAATAGTTGGAA
AGCTCATCAACAGTTGTTGTTAAACAGCCAACAACAAACTCTATCTGACCGTGACACCGA
ATCCGAGGAGAAACCCACTACTGAGATACAAGCCCCAGATTCCCCAGTCAGGTCCCCACC
TCCACTCATGAGATTTCCCCAACCTTCGCCCAATTATGGCGGCGAATTCCAACGTACACC
AAATAGCCCGCGCAGTCAAGAGATACGACGTGAAAAAACGTTTTCACCTCCGTCCGCATT
GGACATATTCAATAGAAACAACAACAATGGGGTGTTTGCCGCCGGCCTGCCTGCCATGAA
TGCCATGGCCGTGGCCTATCCGGCCTTGCTGCAACAGCAATTGTATCAAATTGCACTTGC
CTCTGCAGCCAGCGGGGGAAAAGTTCCTCAGCATTCGCCTTTCCGATTTCCGGAAACAAA
CGTCCGCGAACCGAACGCTTCCAAAAATTCATTTTCGGATTCTTGCGAGGAACAGAGCGA
GCCTCTTGATCTGACGGCTCCGAAATCTCGTCGCCAAAGTGATTCCAAGTCGTCACCTCC
TCCCCCTCCTGCTCAGCCTCAGCCTCTGTTCAATCCACTTCAGGCAGCAGCAGCCAAAGA
CTTTCCAGGGTTCAATAATATGGCGGCTATGATGTATAATATGCAACGGCTTGTACAAAG
CGGAACCATGTCGCCTACTGCTATAGCAGAGCTAATGGGAAATCTAGCAGCCTATAATTT
CCCAGTCATGCCGTACAAGCAGCAGAGAGAACAGCACGTCTCATCTCCTACTGCACAGAA
CCAACGGGCTAAATTATCTCCATCAGTTTTCAGCCCAACTCCAAACAAGCTTGCTAACTA
CGGACGATATCCGGAAACACTTCCAACTCCCGCTTACGCTCCGGAACTGTCAGCTGCACT
TGCCGTTAGATGTCACTATCCGAACCCGTTTACCAGTTTTGGCTACCCCCGAGGTTTTCC
ATCGAGTTCACTGATTCCTCCTTACGGACCAGTTCCGTGTCGCCGTGGACGACCAAAAAA
ACGTTCTTACGGCGAGGCTTCACCTAACGGTTTCCCAGGTGGATATAATCCTCTGGAACT
TTCCGAAGTCGCTGCCAAATATCGCCGCTCTGATAAATCTATAGCCAATGCCCCCCACCC
CAGCGTTTTTGGACCTTCTGGGCCCTCCTCCGTGGATCCGTCTCGTTCGGCCAAAGACTT
TATAGCTGGCAGATCGCCTGCCACCACAATGTCATATAAATGTGACATATGTGACAAGTC
GTTCCAAAAGCAAAGTTCTCTAACAAGACATAAATACGAGCACACAGGCAAGCGACCACA
TCACTGCAATATTTGCGGAAAGTCTTTCAAGCATAAGCATCACCTGATAGAGCACCAGAG
ACTGCACAGTGGTGAAAAACCGTATCAGTGCGACAAGTGTGGCAAACGGTTTTCTCATTC
AGGATCCTATTCCCAACACATGAACCATCGCTACGCTTACTGCAAACCAGAAGACACCAT
GATGCAAGAGCTACGTCAGCAGTTGAAGAAATCCAATAGCGCCAAGGCCAATTTCGATAA
TAGCACAGTCGTCACTTCCACGCCTGACAAAGCCACTGACATCTCTACCGGTGGAAAGCA
GCGTTCCTGGGAAATGAAAAATATTTCCGACGAACGTTCAGACGCTTCTAAAACGGCCGA
GCTTGCGCGCCAAGCGTTATATTTCAACTCCGCCTATAATGTGTCAGACAGCGCCAACAC
CGACGGTTATTCGCCGAGATTCAGTCAGGCTGGCGTGGTAACCGTTATGCCACGTAGTCC
TGACGATCCAGAACCTGGAACCGTACCAAATGCAGAATCGAACGCCTCTGTGTTCAGTCC
CGGTTCTGAGAAGCAAAGTGAAGAAGACGTAAGGCGTTCAATTTCACATGATTCAGCAAT
ATACACGGACCGGACCGGTATCACTGAGCGAGGAAGCATCGGGTCAGAAACAGCAGCCGC
CTTCAGCAGCCTTACACCGATCAAAAAAGCAAACGACAATTCCGAAGAGAGAGCGAGTGA
TGACGACTCTCGTGACCACGGATTCCACGAAACAGCTGAAAAGCCATCGCGCACCTTTCG
CTCGCCTTCTTCGGGTTCTTCCATCGGATCTCCCATATCCCCCAGAAGTGCCTGCATTCC
CACAACGTCTTCTGCAACGGTTATGCACATACCCGTCGCCTCAGAGTACGAGAGGTCGAA
AGAGGAGTTAGTAAAAAAACTAGAAACGATGGCATCGAATATGCTGTATAGGAGAAGTCA
AAGAGACAGGATGAATGAAACAGACGCTTGGCAAAAGCGAAGAATCCCATATGTACTTTT
CTTTTTTCAGTTTTCTTTAACGACTGTATTAACGATCAAGCTATTCCAAATCTTGCCATT
TTTTGAATATTATTTTCTAGTGTGTTCTACATTAGCCTGTTGTGTTTCGTTTCCAATGTA
CATTGGATTGCCACACTCGGTATACCGTTCGTATGCATGTTGCCGCGCTTTCTTTCTTTC
TTTATGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[563-595] 3.86E-8 - T[586-638] 1.44E-16 |
| SMART |
Znf_C2H2_type (IPR013087) - T[564-586] 5.1E-4 - T[592-614] 0.036 - T[620-641] 0.21 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[564-591] 15.708 - T[592-619] 16.664 - T[620-648] 11.24 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[566-586] . - T[594-614] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZEB2_HUMAN | 86.905 % | 176 | 8.84E-45 |
| ZEB1_HUMAN | 86.047 % | 178 | 1.38E-45 |
| ZN232_HUMAN | 44.037 % | 100 | 3.24E-22 |