- Clone 'AHC0AAA193YE04' >
- Transcript 'KH2012:KH.C1.219.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S11.g01147.01.t
Possible name(s)
PRKCSH
Gene model
Location
S11 [618,855 / 624,751]
Amino acid sequence
Length: 609
>Harore.CG.MTP2014.S11.g01147.01.p
MDWKSVTFILMIAAITKVQSKLDRPRGVSLTKKVFYDSSKDFTCLDGSQTVPFSQVNDDY
CDCNDGSDEPGTSACPHGQFHCTNAGYKPMNIPSSRVNDAICDCCDGSDEWKHEGLCKDS
CKELWKSAREEMIKQAEAANKGFEIKKEYIAKGNEAKQENQKKVESLEKELELLKEAEAR
LKVNKEDAEKLEGEMKAVEKQAWDEFRAKVQQHQETREAADAFSELDVNKDGSISVEELQ
AHKELDITPEDEEFSETESKSILGGDTADAPHFIEVVWKEIGSKFVKAPVEETPTETTEF
NVPEQEVEDENDEDEDENYEFPEDDDEDEDVGEYEEDLDEEKSQDDEEEEKPAAELITPE
QKVQEQQTTGEPAASSLPEEPLYSAMTQGYIKTADDARHVFDENKDQQKNLEKEMSSLKK
ILEMDFGPDEAFQELRGNCYNLDTHEYTYKLCPFEKTVQVPKSGGSETNLGRWGSWNGPE
TNKYSSMKYPNGLKCWNGPDRLKFLVGMRTNCSLPRSHPGASTDLNSPLQLPVSSLMFQR
NLTTNFNLCCLMLSHLFYSTNSCRRQTSMSGHPNSRGKTRCCLLCVKKNVFVCLCFVISM
CYIPPVMFT
Nucleotide sequence
Length: 2,803
>Harore.CG.MTP2014.S11.g01147.01.t
AGATAGTATTGCAAGGATTGACTCCGATCACACCCACCCACTGTAATAGTAGGACTATTA
ATAGCGGTAGTTCATTTTGGATGATTCGTACATAATGGATTGGAAGTCAGTCACTTTTAT
TTTGATGATAGCTGCCATTACAAAAGTCCAGTCAAAGTTGGATAGACCAAGAGGGGTATC
TCTGACAAAGAAGGTTTTCTATGACTCCAGCAAAGATTTCACATGCCTTGATGGCTCACA
AACTGTTCCATTTTCGCAAGTGAACGATGATTACTGCGACTGCAATGATGGTTCAGATGA
GCCTGGAACATCTGCCTGTCCTCATGGACAGTTCCATTGCACGAATGCTGGTTACAAGCC
TATGAACATTCCATCATCCAGAGTGAATGACGCTATCTGTGACTGCTGTGATGGAAGCGA
TGAATGGAAACATGAAGGGTTATGTAAAGATTCTTGCAAAGAACTTTGGAAATCTGCACG
AGAAGAAATGATCAAACAGGCCGAAGCTGCAAACAAAGGTTTCGAAATTAAAAAAGAATA
TATTGCAAAAGGAAATGAGGCGAAACAGGAAAATCAGAAAAAAGTAGAATCTCTGGAGAA
GGAACTTGAGTTGTTAAAAGAGGCTGAAGCCAGGTTAAAAGTGAACAAAGAGGATGCAGA
AAAGCTTGAAGGAGAAATGAAAGCTGTTGAAAAACAGGCCTGGGATGAATTCAGAGCAAA
GGTGCAACAACATCAGGAAACGAGAGAAGCTGCGGATGCTTTTTCAGAGTTGGATGTGAA
CAAAGACGGCAGTATTTCAGTGGAAGAATTGCAGGCTCACAAGGAGCTCGACATCACTCC
AGAAGATGAAGAATTCTCGGAAACCGAATCGAAGTCAATACTTGGCGGAGACACTGCCGA
TGCCCCACATTTCATTGAAGTGGTTTGGAAGGAAATTGGATCCAAATTTGTGAAAGCGCC
CGTTGAAGAAACACCAACCGAAACAACAGAGTTTAATGTTCCTGAGCAGGAAGTGGAGGA
TGAGAATGATGAAGACGAGGATGAAAATTACGAGTTTCCAGAGGATGATGATGAAGATGA
AGATGTCGGTGAATATGAAGAAGATTTAGATGAAGAAAAGAGTCAGGATGATGAAGAAGA
GGAAAAACCAGCAGCTGAGCTCATTACACCAGAGCAAAAAGTTCAGGAGCAGCAGACTAC
AGGAGAACCGGCAGCTAGCAGTTTGCCAGAGGAACCACTGTATAGTGCAATGACTCAAGG
CTACATAAAAACAGCTGATGATGCACGGCATGTGTTTGATGAAAATAAAGACCAACAGAA
GAACTTAGAGAAGGAGATGTCGTCTCTGAAGAAAATACTAGAAATGGATTTTGGACCAGA
TGAGGCATTCCAGGAACTACGAGGAAACTGTTATAATTTGGACACACATGAGTACACATA
CAAATTATGTCCTTTCGAGAAAACAGTGCAAGTACCGAAAAGCGGAGGTTCAGAAACAAA
TTTAGGGCGTTGGGGGTCATGGAACGGCCCAGAAACAAACAAATATTCTTCAATGAAGTA
TCCAAATGGTTTGAAGTGTTGGAATGGGCCCGATAGGTTAAAATTTCTTGTGGGGATGAG
AACAAATTGCTCTCTGCCTCGGAGCCATCCAGGTGCGAGTACAGATTTGAATTCACCACT
CCAGCTGCCTGTCAGCTCATTAATGTTCCAGAGAAACCTCACGACGAACTTTAACCTTTG
TTGTCTGATGCTGTCACACCTCTTCTATTCCACAAATTCTTGTCGCCGTCAAACTTCAAT
GTCAGGTCACCCAAACTCGAGAGGAAAAACGCGATGCTGCCTTTTATGCGTTAAAAAAAA
TGTTTTTGTTTGTCTGTGCTTCGTAATCAGTATGTGCTATATTCCTCCCGTCATGTTTAC
TTGATAAAAAATTCTCTCAATCGCGTCGAACTACGTGTGAAAACGTGGATGCAGTTGTGC
CAAATAGTTCAAGTAAATTTGTTGGATTTACCTTTCTTTTGCATTGCTTGGACTGGGATA
ATGACTTTTTTTGCGCTGGAGATTGGCCTTCTTTCACTCCTTTAACCTTATTCGGAAACC
GCAAATCGGTACAATTAGTACGATGATCGTGTGACAAGTCGTAGCTTGTCGGTACACGGG
AAAATGTTCCCTTTTCGCCGCCTGTAGTAATTTAGAGACCAGTAAAATAAAACGTGCAAT
TTATATATGCATTCTACGTAAATTTTCCTTTCTGGTTCACACAGGAAAACCTTAGTTTAG
TGGTTTCTGACATAATGACTACCGACGCTTCCAAATTTGGACAATCGGTCGTTTCCATTC
GAATCCGTTGAATGATGGATTTCTTTAGTCTGCATGGCGAAAGATATGTTATACATATTC
TCCAAACCCATAAAAAATAGGCCACAGTATCAAATTTAAGCTTTTCTCATTACTGTAGAA
AGTTGTAAATTTCTAAAACAAAAACAACGCTCTTTATCAGTAATCCCACCTCTGATAGAC
GGAAATGACAACTACAGACTTACTAAGAAAATGTCAACCAAATATAAACACTGAAGTCGT
AAAAATCTTTCAATTAAGAGACTAAAATAGGTTTTATTGGAATTTCATGTTTCTGAGAGT
GCTAGCGCCGTAAAAGTTGTTACACGAATTGAACTTTATAATGAATTGGCACAGAAGTAC
TACAGTGTGCAAAAAGCCAGTCGTTAAATGTGAAAGCCTGTAGAATTATTATATAGATAT
TTTTTAACACGTTGGTTTCCCATTTGCCTTTTGGTCGTCGTAG
| PANTHER |
Glucosidase_2_bsu (IPR026874) - T[7-501] 2.4E-105 |
| Pfam |
PRKCSH_N (IPR028146) - T[11-174] 7.0E-43 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[75-111] 8.43307E-4 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[214-253] 7.35E-5 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[214-249] 10.636 |
| Pfam |
EF_hand_dom (IPR002048) - T[221-240] 8.0E-6 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[227-239] . |
| Pfam |
PRKCSH (IPR036607) - T[400-501] 2.8E-13 |
| Gene3D |
Man6P_isomerase_rcpt-bd_dom_sf (IPR009011) - T[432-523] 2.6E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLU2B_HUMAN | 51.698 % | 269 | 6.24E-83 |