Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S119.g12111.01.t

Possible name(s)

STX10; STX6

Gene model

Harore.CG.MTP2014.S119.g12111

Location

S119 [132,198 / 146,496]

Sequences

Amino acid sequence

Length: 256

>Harore.CG.MTP2014.S119.g12111.01.p
MSVEDPFFVVKSEVEKSVTNCKTLQERWRSLLSDIGPGKRDQYERVANELRNNIRSIEWD
LEDLEETIGIVQANPRKFRISSAELLERNSFISETRQNINDMKEEMSSPEVKSMLENMTR
KSLLRNGLHQNDNYGSQRHTAIEVQHHGDERESFIQDNQQQQRLIIEQQDDQLELVADSV
GILKNMSRAIGNELDEQSVMLDGLGHEMENTQTRMDSILRKMAKVTHMSNDRRQWCAIGV
LGGSMFMVFLLFFLIP

Nucleotide sequence

Length: 771

>Harore.CG.MTP2014.S119.g12111.01.t
ATGTCTGTTGAGGATCCATTCTTTGTTGTAAAAAGTGAAGTTGAGAAGTCGGTGACAAAT
TGTAAAACTCTCCAGGAGCGTTGGAGATCTCTTCTTTCCGACATCGGACCAGGAAAACGA
GATCAATATGAACGTGTCGCTAACGAACTGAGAAACAATATTCGGAGTATAGAATGGGAT
TTAGAAGACCTCGAGGAAACAATTGGTATCGTCCAAGCGAACCCGCGAAAATTTAGAATC
TCTTCGGCAGAACTTCTCGAGCGCAATTCGTTCATTTCCGAGACGAGACAAAACATAAAC
GATATGAAGGAGGAAATGTCGAGCCCGGAAGTAAAATCAATGCTTGAAAATATGACAAGA
AAGAGCTTGCTACGTAACGGACTTCATCAGAACGATAATTACGGTTCTCAGAGACACACG
GCCATTGAAGTTCAGCATCACGGTGACGAGAGAGAGAGTTTTATTCAAGATAATCAACAG
CAGCAAAGATTGATAATTGAACAGCAAGATGATCAGCTTGAACTAGTAGCAGATAGTGTT
GGAATATTGAAAAATATGTCCAGGGCAATAGGAAATGAACTCGATGAACAATCGGTTATG
CTTGATGGACTCGGACATGAAATGGAAAACACTCAAACTAGAATGGATTCAATATTGAGA
AAAATGGCGAAAGTAACTCACATGTCAAATGATCGCAGACAATGGTGTGCAATTGGCGTC
CTCGGCGGTTCAATGTTCATGGTTTTTCTTCTGTTTTTTCTTATTCCATGA

InterProScan

SUPERFAMILY
SNARE (IPR010989) - T[4-108] 2.59E-29
Pfam
Syntaxin-6_N (IPR015260) - T[5-103] 7.4E-31
SMART
T_SNARE_dom (IPR000727) - T[158-225] 1.2E-6
ProSiteProfiles
T_SNARE_dom (IPR000727) - T[163-225] 15.373

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 51.02 % 254 3.88E-85
STX10_HUMAN 46.025 % 225 4.97E-74