- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1187.g11235.01.t
Possible name(s)
APPBP2
Gene model
Location
S1187 [0 / 5,817]
Amino acid sequence
Length: 857
>Harore.CG.MTP2014.S1187.g11235.01.p
DSYSSSRPTKSGISFMKPSNSKPQNIKDFSSRPSIPFSSTTTPSEPFSTSRPRAPATTPP
RSDNFAPGKEINMEKMIELKNKSELYLKHGEYSLACESLQQLIQLQVNPDEKLELLQQIA
ECQVMCGQSCDKEINTIISLCRTLHISANDLKPTAQEHFTESRLVRAYVMFVCISQMFKH
NKEPSDDLQGMRESVQVLRHIVEKMVKQARLRKIVSSHVIPSMHEMLADIRQIDNVSTDE
RVENEALTLNAIASSVDDIEEHEEAVKLYLEGMSLMEKEFGSNVTACHVYGALLHNIGTS
KCHQRKFVDAEEFYIRAIEAKQSALDFKSEEKKQSDVSDAQDSLERCRTLMRKFHQVPGP
KQQSSFQSNEKSELYMKHFEYQSAYNVLKELQELQGDSWKQFETLQQIVECLIMTDQSCD
EEMNEIISKCQDLRLAPRAVHSTAEKYFDDDDLIRSYTLFHCAGKMHKTGGEVEALTALT
KCVSRMDDIVTKVVKRPRYRRVATRFMIPSMKELLQDLREMDYVSYEDRIIKEGDCLLFI
GSVFHELSDYHSAGKYFSEGAELLQTELGDNAYKYRLLSSLLNNTGSSYFYLGHYKDALD
YHQEAVRAAELAEDFSDEEHRQKSIDGFMKNINTCSRHTEFGPFPSPTSEPKPLSKPPPS
PTATSSSSLVPRKEFRNRRSKPTEVGASTSATPEKTSAGFGHAKLHTESHPKSTAASSPS
PTLKKEVPDMNSRWSHKDTGKEINMEKMISLKDQSELCMKHNEYSLAFDNLQQLVTYQRD
AWSQMETLQQIAECQVMCDRSQFEEITEIISICKSLQLSPGEILVSADKHLEEDQLIRSY
VMCICASKMHKAQSDPT
Nucleotide sequence
Length: 2,573
>Harore.CG.MTP2014.S1187.g11235.01.t
ATGATTCATACAGTTCTTCACGTCCAACGAAATCCGGGATCTCGTTCATGAAACCGAGCA
ATTCTAAGCCACAAAACATCAAAGACTTTTCGTCCAGACCATCAATACCGTTCTCATCTA
CAACTACTCCCTCTGAGCCATTTTCGACATCTCGTCCAAGAGCACCAGCAACAACTCCGC
CTCGCAGTGACAACTTCGCACCTGGGAAAGAAATAAACATGGAAAAAATGATTGAACTGA
AAAACAAGTCAGAGCTTTATCTCAAGCACGGCGAATATTCATTGGCGTGCGAATCTCTAC
AGCAACTTATCCAGCTACAAGTGAACCCTGATGAAAAACTAGAACTTCTACAACAGATTG
CTGAATGCCAGGTCATGTGCGGTCAATCCTGCGACAAGGAGATAAACACTATCATATCCT
TATGCCGAACCCTACATATCTCAGCCAATGATCTAAAACCAACAGCACAAGAGCATTTCA
CAGAGTCCAGGCTTGTCCGCGCTTACGTCATGTTCGTTTGTATCAGCCAGATGTTCAAAC
ACAATAAAGAGCCAAGCGACGATCTCCAAGGCATGAGAGAAAGTGTCCAAGTCCTGCGTC
ACATCGTTGAAAAGATGGTCAAACAAGCACGACTGCGTAAGATCGTCTCGAGTCACGTAA
TTCCATCCATGCATGAGATGCTAGCCGACATCCGTCAAATAGATAATGTATCCACGGATG
AAAGAGTAGAAAATGAAGCACTGACTCTTAATGCAATCGCATCCAGTGTAGATGACATAG
AGGAGCACGAGGAAGCTGTTAAGCTCTACCTCGAAGGAATGAGCCTGATGGAGAAGGAGT
TCGGATCAAATGTTACCGCATGTCACGTGTATGGTGCCCTTCTGCATAACATCGGAACAT
CAAAATGTCACCAACGTAAGTTCGTAGATGCTGAGGAGTTCTATATTCGAGCCATAGAAG
CGAAACAGAGTGCTTTGGATTTCAAATCTGAAGAAAAAAAGCAAAGTGATGTGTCAGATG
CACAGGATAGCCTCGAAAGATGTCGGACACTGATGAGAAAGTTTCATCAGGTACCGGGAC
CGAAACAACAAAGCAGTTTCCAATCTAATGAAAAATCAGAGCTTTATATGAAGCACTTCG
AGTACCAGTCAGCCTACAACGTTTTAAAAGAATTGCAGGAATTACAAGGAGATTCATGGA
AACAGTTTGAAACCTTACAACAAATTGTCGAATGTCTTATTATGACTGACCAATCATGCG
ATGAAGAAATGAATGAGATAATTTCAAAATGTCAGGATCTTCGTCTTGCCCCGCGCGCTG
TTCATTCAACAGCTGAAAAATATTTCGATGACGACGATCTCATTCGCTCTTACACTTTGT
TTCACTGCGCTGGTAAGATGCACAAGACCGGTGGTGAGGTGGAGGCGTTAACCGCGCTAA
CAAAATGTGTATCAAGGATGGACGACATCGTGACAAAAGTAGTGAAGAGACCACGATATA
GAAGAGTTGCAACAAGATTCATGATTCCATCTATGAAAGAACTGCTACAGGATCTCCGTG
AAATGGATTACGTTTCTTACGAAGATAGGATAATCAAAGAAGGTGACTGTCTGCTCTTCA
TTGGATCCGTTTTCCACGAGCTCAGCGATTACCATTCAGCAGGGAAGTACTTCAGCGAGG
GGGCCGAACTGTTACAAACTGAATTAGGAGATAACGCTTACAAATACAGACTTTTAAGTT
CCTTGCTGAACAATACCGGATCGTCCTATTTTTATCTCGGTCACTACAAAGATGCATTGG
ACTATCATCAAGAAGCTGTACGGGCTGCTGAGTTAGCAGAAGATTTCTCCGACGAGGAGC
ACAGACAAAAGAGCATCGACGGATTCATGAAAAATATAAACACTTGCTCACGTCACACAG
AATTTGGCCCCTTCCCTTCACCAACATCAGAGCCAAAACCACTCAGCAAACCTCCTCCCA
GCCCGACAGCAACATCATCTTCATCACTTGTTCCTCGTAAGGAATTTCGAAATCGTCGTT
CAAAGCCAACAGAAGTTGGTGCTTCAACTTCAGCCACACCAGAGAAAACATCTGCAGGAT
TTGGCCATGCAAAACTCCATACCGAATCTCATCCCAAGTCTACCGCAGCATCTTCTCCAT
CACCAACCCTTAAAAAGGAAGTGCCAGATATGAATTCACGTTGGAGCCACAAAGACACCG
GGAAAGAAATCAACATGGAGAAAATGATCTCACTAAAAGATCAATCCGAGCTTTGCATGA
AACACAACGAATATTCTTTGGCATTCGACAACCTGCAACAGCTCGTAACATACCAACGTG
ACGCATGGTCGCAGATGGAGACATTGCAACAAATAGCTGAATGTCAAGTGATGTGCGATC
GATCACAATTCGAAGAAATAACCGAAATTATTTCGATCTGCAAATCGCTTCAACTTTCAC
CTGGCGAAATCCTTGTATCAGCTGACAAACATCTGGAGGAGGACCAGCTAATCCGTTCCT
ATGTCATGTGCATATGCGCGAGTAAAATGCACAAAGCTCAGAGCGATCCGACA
| SMART |
TPR_repeat (IPR019734) - T[76-109] 65.0 - T[246-279] 140.0 - T[291-324] 15.0 - T[534-567] 130.0 - T[579-612] 3.1 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[76-109] 5.9 - T[246-279] 5.664 - T[291-324] 5.458 - T[534-567] 6.49 - T[579-612] 8.142 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[225-411] 2.6E-9 - T[508-635] 8.2E-10 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[263-396] 4.17E-8 - T[532-607] 4.17E-8 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[534-567] 6.599 - T[579-612] 8.654 |
| Protein Name | Identity | Bit Score | e-value |
|---|
