- Clone 'CCTU17169' >
- Clone 'ciad010c07' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S117.g07212.01.t
Possible name(s)
ANKHD1-EIF4EBP3; ANKRD17; KIDINS220
Gene model
Location
S117 [238,064 / 240,695]
Amino acid sequence
Length: 378
>Harore.CG.MTP2014.S117.g07212.01.p
MEDAKVVELHILEPLSLHNYVINDNLAEVANVVNMNKSLIEQKNEFDQTALHISCEMGND
SITNCLLTNGANINVQDDEGMTPLIAASKAGSVLCAQLLINERANLEITDKVGWTALMWA
CYKGHTEVVAVLLSEGANVHVSVAYHMTALLWAAGRGYMRIVRLLCEKGAKVNGTDKFGS
TPLMWACRRGFIDVVIILLDFKADGDAVGAEGSNALIAATKNNHMNCVRILLERAKVNIN
HTDKNNCSALSYAAKQGMHEAIGLFLNCGAYLNLVDRNGDTPLIKAVKQSHTDTVRALLS
RYADVDIRGRNDKTALHWASELGQISIVHELLACNADTEAVSEDGETPLLRAVKNKNITI
TRYLLDKGASVIATDAVS
Nucleotide sequence
Length: 1,224
>Harore.CG.MTP2014.S117.g07212.01.t
AGTAATTTATTGTATGACTAGAAAGATGGTGCATGTATTTTTGTGAGCTTACAGACCTGT
TAGTCAGACCGGTTTGGTATAGCCAAGATGGAAGATGCAAAAGTAGTTGAACTGCATATT
TTGGAGCCACTGTCACTCCACAATTATGTCATCAATGACAATCTTGCTGAGGTGGCCAAT
GTTGTGAATATGAACAAGTCATTAATTGAGCAAAAAAATGAGTTTGACCAGACTGCATTG
CATATCTCTTGTGAGATGGGAAATGATTCCATAACCAACTGCCTCCTTACCAACGGTGCT
AATATAAATGTACAAGATGATGAAGGGATGACTCCCCTGATCGCCGCAAGCAAAGCAGGC
TCTGTTTTATGCGCTCAGTTACTGATAAACGAAAGAGCAAATCTTGAAATTACTGATAAG
GTTGGTTGGACTGCTCTTATGTGGGCATGTTACAAAGGCCATACTGAAGTGGTTGCCGTA
TTGCTCAGTGAAGGTGCTAACGTACATGTCAGTGTTGCTTATCACATGACAGCATTGCTC
TGGGCTGCCGGTCGTGGTTACATGAGAATAGTTCGACTTCTGTGTGAAAAAGGAGCAAAA
GTCAATGGGACCGACAAGTTCGGAAGTACACCTCTTATGTGGGCATGTCGTCGTGGGTTC
ATCGATGTTGTGATCATCCTGCTCGATTTCAAGGCAGACGGAGATGCTGTCGGTGCCGAG
GGATCGAATGCTCTGATAGCAGCCACCAAGAACAATCACATGAATTGCGTCAGAATTCTG
TTAGAAAGGGCAAAGGTTAATATCAATCACACTGATAAAAACAATTGTTCTGCTCTGAGC
TATGCTGCTAAACAAGGAATGCACGAAGCCATAGGCCTGTTCTTGAACTGCGGTGCGTAC
TTGAACCTCGTCGACCGCAATGGAGACACTCCGCTTATCAAGGCCGTTAAACAAAGTCAC
ACGGATACCGTACGAGCATTACTGAGTCGATACGCTGATGTCGATATTCGTGGAAGAAAT
GACAAAACCGCATTGCATTGGGCGAGCGAGCTGGGACAAATCAGCATAGTTCATGAACTT
CTGGCATGCAACGCAGATACAGAGGCGGTTTCGGAAGATGGGGAAACTCCTCTTTTGCGT
GCTGTTAAGAACAAGAACATAACAATTACTAGATACCTATTGGACAAGGGTGCTTCTGTA
ATCGCAACTGACGCAGTAAGTTAA
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[14-117] 1.1E-23 - T[118-231] 1.3E-37 - T[232-321] 1.6E-25 - T[322-377] 1.8E-11 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[17-376] 86.961 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[27-372] 1.3E-79 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[46-78] 11.514 - T[79-111] 9.938 - T[112-144] 10.793 - T[145-177] 9.992 - T[178-210] 9.19 - T[245-277] 8.603 - T[278-310] 11.274 - T[311-343] 10.072 - T[344-376] 11.835 |
| SMART |
Ankyrin_rpt (IPR002110) - T[46-75] 5.8E-4 - T[79-108] 0.12 - T[112-141] 6.2E-6 - T[145-174] 0.05 - T[178-207] 0.007 - T[211-241] 0.045 - T[245-274] 29.0 - T[278-307] 0.0017 - T[311-340] 0.011 - T[344-373] 0.0049 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[51-141] 2.3E-17 - T[150-241] 1.7E-15 - T[306-374] 1.0E-9 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[74-199] 4.68296E-34 - T[240-365] 7.89861E-31 |
| PRINTS |
Ankyrin_rpt (IPR002110) - T[113-128] 6.6E-5 - T[161-175] 6.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ANR17_HUMAN | 31.461 % | 161 | 1.65E-43 |
| ANKH1_HUMAN | 31.214 % | 160 | 3.31E-43 |
| KDIS_HUMAN | 47.5 % | 320 | 2.58E-98 |