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TRANSCRIPT CARD

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  1. Clone 'cicl078d08' > 
  2. Clone 'AHC0AAA209YF04' > 
  3. Clone 'csef042c03' > 
  4. Clone 'ciht027f23' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S116.g04041.01.t

Possible name(s)

ZNF345; ZNF384; ZNF467

Gene model

Harore.CG.MTP2014.S116.g04041

Location

S116 [171,449 / 174,320]

Sequences

Amino acid sequence

Length: 643

>Harore.CG.MTP2014.S116.g04041.01.p
MLATSTQPGMFPVVSGNNPLTLVHTHPLPGSSTVSVQSLNTLPSTSNNDMVPVTIGEGVG
IKKHFLCTYCNKAFGSRYNATRHEKGCKLAPPEMSQQNESSPVACPNCGKQFASQDGVNR
HLKKKCKMGGQYIENGPSRSWPTKKVHMCKYCGKQFSTKWNAIRHENLFHSNDEPVIPPM
TITVPTATQLHYIHKKPERFCRFCGNYFSTKYNAIRHERICTRVTGTGYTQLVIPSTTDA
KISASVQVVSSQQVNQQQIQPQATPNNQQQQLQQPVVHVQQQQQQQQQQQRQQRTQVQHV
SQQIQQIQVQQVQQQQVQQVQQQARQQQEVQQNNTIHQQLQQIQQRAAAAQQLQQQTQQL
QQQQQQQQQQQQQQQQQQQQQHHIVPVCQQQTQIHISPQVVFVSPYHVCKFCNKQLDTKC
DPTPVLREELQNGSLAAATLQVQTPITPTIITGSSVPMIATLPTQNITIPIQQPSQAQQQ
QQQQTSQQHVQQQQIQQNQVTQQTPPGQAPISTNQQKPHGCQFCNKHFATKWYLDQHEKI
HTGQAVTCKVCNKSFVTRWHLEKHVRVHMPGAKKNKRDSGSGPMDQASFRQPLLTEEGLQ
HAALDRSREELVVSVPYTLSSDRSQMSQITITALSQPAPSVAK

Nucleotide sequence

Length: 2,035

>Harore.CG.MTP2014.S116.g04041.01.t
AGGGTAATGATCCAGTCAAGAACTGAATGGCTTAGAAATATAATATCAGGAGTATTTGTA
TAACAACTCCATAAGACACCCCTGTATCTTTATACATGTCACCATGCTTGCCACATCGAC
ACAGCCAGGCATGTTCCCTGTCGTGTCTGGAAACAACCCTCTGACCCTAGTACACACTCA
CCCCCTGCCGGGATCGTCGACGGTGTCGGTCCAGTCTTTAAACACCCTCCCATCCACATC
GAACAATGACATGGTACCTGTGACCATTGGAGAAGGGGTCGGAATTAAAAAACATTTTCT
CTGCACCTACTGTAACAAAGCTTTCGGCTCTCGGTACAACGCCACGCGACACGAGAAGGG
GTGCAAGTTGGCACCGCCTGAAATGAGCCAACAAAACGAAAGCAGTCCGGTGGCTTGCCC
CAACTGCGGAAAACAGTTTGCTTCTCAGGACGGGGTCAACAGGCACCTTAAGAAAAAATG
CAAGATGGGAGGCCAGTACATTGAAAACGGCCCGTCACGAAGCTGGCCCACAAAAAAAGT
CCACATGTGCAAATACTGCGGAAAACAATTTAGCACCAAGTGGAACGCGATTCGTCACGA
AAATCTCTTTCACAGTAATGACGAGCCTGTCATACCACCCATGACGATTACGGTGCCGAC
CGCGACCCAGTTGCATTACATTCACAAAAAGCCAGAGCGGTTTTGTCGCTTTTGCGGCAA
CTACTTCAGCACAAAGTACAATGCCATCCGTCACGAGAGGATATGTACCCGCGTGACTGG
AACCGGCTACACCCAACTGGTAATCCCAAGCACCACAGACGCAAAAATTTCCGCCTCAGT
GCAAGTGGTCTCGTCCCAACAGGTGAATCAGCAGCAAATTCAACCACAGGCTACGCCGAA
CAATCAACAACAGCAATTGCAGCAACCGGTTGTACATGTGCAACAACAGCAGCAGCAACA
GCAACAACAACAAAGACAGCAGAGAACTCAAGTACAACATGTATCGCAACAGATCCAGCA
GATTCAAGTACAGCAAGTACAACAGCAACAAGTACAACAGGTGCAACAGCAAGCGCGGCA
ACAACAGGAGGTTCAACAAAATAATACAATACATCAACAACTCCAACAAATTCAACAAAG
GGCAGCTGCAGCCCAACAGCTGCAACAGCAAACTCAGCAACTACAACAACAACAGCAGCA
GCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAACAACATCATATAGTTCC
CGTTTGTCAGCAACAAACACAAATTCATATCAGCCCACAAGTCGTATTCGTTAGCCCGTA
CCATGTATGCAAGTTTTGCAACAAACAACTCGATACAAAGTGCGACCCAACTCCTGTGCT
GCGCGAGGAGCTGCAAAACGGCTCACTTGCCGCCGCAACATTGCAAGTGCAGACTCCCAT
CACCCCAACGATCATAACGGGGTCATCAGTACCGATGATCGCAACTCTGCCTACTCAAAA
CATCACAATTCCGATTCAACAACCTTCGCAAGCACAACAGCAGCAGCAGCAGCAGACGTC
CCAGCAGCATGTACAGCAACAACAAATCCAGCAGAACCAAGTGACCCAGCAGACCCCACC
AGGGCAGGCCCCCATCTCTACTAACCAACAGAAACCCCACGGCTGTCAGTTTTGCAACAA
GCATTTCGCCACCAAGTGGTATTTGGACCAGCATGAGAAAATCCACACAGGCCAGGCCGT
GACCTGCAAGGTCTGTAACAAGTCGTTTGTCACAAGATGGCACCTTGAGAAACACGTCAG
GGTTCATATGCCAGGAGCCAAGAAAAACAAGAGGGACTCTGGCTCCGGTCCCATGGACCA
GGCCTCGTTCCGCCAGCCCCTTCTTACCGAGGAGGGACTGCAACATGCCGCTCTCGACAG
AAGTCGAGAGGAGTTGGTAGTTTCTGTTCCTTATACTTTGTCTTCTGATCGATCCCAAAT
GTCGCAAATTACTATTACAGCCTTATCCCAGCCGGCGCCTTCTGTAGCAAAATAA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[63-123] 1.04E-6 - T[145-220] 1.46E-5 - T[517-568] 6.55E-11
SMART
Znf_C2H2_type (IPR013087) - T[65-85] 56.0 - T[103-123] 24.0 - T[147-170] 0.53 - T[519-541] 0.14 - T[546-568] 4.8E-4
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[147-175] 12.154 - T[519-546] 11.365 - T[546-568] 10.616
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[149-170] . - T[521-541] . - T[548-568] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value