- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1164.g07104.01.t
Possible name(s)
RDH11; RDH12; RDH13
Gene model
Location
S1164 [5,988 / 6,939]
Amino acid sequence
Length: 316
>Harore.CG.MTP2014.S1164.g07104.01.p
MAESKVKTIIKGLVNPEIKIPGKTVIITGANTGIGFVTAWNLAKRGARVIIACRNLEKGE
EAKKKIVEESKSENVVLKKLDLSSFESVREFAADINATESRLDILINNAGVMMCPQSETK
DGFEIQFGTNHLGHFLLTNLLLDLIKRSAPSRIVTVSSTAGHSKQLGADIYWDDLNLKKS
YTPSKAYAQSKLCNVLFSKELAKRLEGTKVTTYSLHPGIVQTELMRHVGTHERPTMLDRM
MSWSLVFSKFIAKTPVQGAQTSIYCAVAPELENVSGKYYADCKVAGESANAKKKEYPERL
WKVSEELTGLEESVEE
Nucleotide sequence
Length: 951
>Harore.CG.MTP2014.S1164.g07104.01.t
ATGGCTGAAAGCAAAGTGAAGACAATTATCAAGGGTTTAGTGAATCCGGAGATCAAAATT
CCTGGAAAAACAGTGATCATAACAGGAGCTAATACTGGAATTGGTTTTGTAACTGCCTGG
AATCTAGCCAAGCGAGGAGCAAGAGTTATTATCGCTTGCAGGAATTTGGAAAAGGGAGAA
GAAGCGAAAAAGAAGATTGTTGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCTGTTAGAGAATTTGCCGCTGACATCAATGCTACCGAATCT
CGACTGGATATTCTCATTAATAACGCAGGTGTGATGATGTGCCCGCAATCTGAGACCAAG
GATGGGTTCGAGATACAGTTTGGGACGAATCATCTGGGGCATTTTCTGTTGACAAATTTG
CTTTTGGATTTGATAAAGAGAAGTGCTCCAAGCAGGATCGTGACAGTGTCATCCACGGCT
GGTCATTCCAAGCAGCTTGGAGCTGATATTTATTGGGATGATTTGAATTTGAAGAAGAGC
TACACTCCTTCCAAAGCGTACGCTCAAAGCAAGTTATGCAATGTTCTTTTCTCCAAGGAA
CTCGCGAAACGACTCGAAGGAACCAAGGTCACGACCTATAGCCTGCATCCAGGAATTGTG
CAGACGGAGTTGATGCGACATGTCGGGACTCACGAACGCCCCACGATGCTGGATCGGATG
ATGTCATGGTCTTTAGTTTTCTCGAAATTTATAGCGAAAACTCCAGTCCAAGGAGCGCAG
ACATCCATTTACTGCGCCGTCGCACCAGAGCTCGAAAACGTCTCTGGAAAATACTACGCG
GATTGCAAGGTAGCTGGCGAATCTGCCAATGCTAAGAAGAAAGAGTATCCGGAGCGTCTG
TGGAAAGTGAGCGAAGAGTTAACAGGCCTGGAGGAGAGTGTAGAAGAGTAG
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[21-284] 7.52E-59 |
| Pfam |
SDR_fam (IPR002347) - T[23-171] 2.1E-28 |
| PRINTS |
SDR_fam (IPR002347) - T[24-41] 2.3E-17 - T[100-111] 3.1E-6 - T[100-111] 2.3E-17 - T[145-161] 2.3E-17 - T[151-159] 3.1E-6 - T[187-206] 3.1E-6 - T[187-206] 2.3E-17 - T[208-225] 2.3E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 51.447 % | 288 | 1.17E-96 |
| RDH13_HUMAN | 52.703 % | 265 | 1.94E-87 |
| RDH12_HUMAN | 51.768 % | 283 | 6.26E-95 |
