- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S114.g14745.01.t
Possible name(s)
BTBD9; SPOP; SPOPL
Gene model
Location
S114 [164,210 / 171,839]
Amino acid sequence
Length: 388
>Harore.CG.MTP2014.S114.g14745.01.p
MLAPPRVTQSQGSSRSSTPSSPSSPDLSTPVAENWCYTQVKVVKFSYMWTINNFSFCREE
MGEVLKSSTFSSGANDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCHKSEVRAKFKFSIL
NSKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLMDETNGLLPDDKLTLFCEVSVVQDS
VNISGQSNMMQLKVPDCHLAEDLEVLLESGDFTDCTFFVEGKEFRVHKAIIAARSVVFRA
MFQHEMEERKLNKVEISDISADVFREMLSFLYTGSAPNLDQMAAELLAAADKYALQRLKV
MCEESLCSNLSVENVSDILILADLHNADQLREMAIDFINSHALDVMETTGFESMVRSHAH
LVADAFRALAAIQSPPAGPSRKRLKSSN
Nucleotide sequence
Length: 2,047
>Harore.CG.MTP2014.S114.g14745.01.t
AGATGAAACTTAAAAATTAAAATAAAAGGATTAAAGGAAAAATATTTGAGAATTATGTTG
GCTCCACCAAGAGTTACCCAGTCCCAGGGGTCGTCGAGGTCAAGTACCCCATCGTCCCCT
TCGAGCCCGGATTTATCAACTCCTGTTGCCGAAAACTGGTGTTACACCCAGGTTAAAGTT
GTGAAATTCTCGTACATGTGGACAATAAATAACTTCAGTTTTTGTCGAGAGGAAATGGGA
GAAGTATTAAAGAGTTCAACATTCTCTTCGGGAGCAAATGATAAAATGAAATGGTGTTTG
CGTGTTAATCCGAAAGGTCTCGACGAAGAGTCAAAAGATTATTTGTCTCTCTACCTCCTG
CTTGTGTCTTGTCATAAAAGTGAAGTCCGGGCAAAGTTTAAATTTTCAATTCTCAACAGT
AAAAGAGAAGAAACAAAAGCAATGGAGAGTCAACGAGCCTACAGATTTGTTCAAGGCAAG
GATTGGGGATTTAAAAAATTCATAAGGAGAGATTTTTTAATGGACGAAACGAACGGATTA
TTACCTGATGACAAACTGACTTTGTTTTGTGAGGTCAGCGTTGTTCAGGATTCCGTTAAC
ATATCCGGTCAGTCGAACATGATGCAGTTGAAAGTACCAGACTGCCACCTAGCGGAGGAT
TTAGAAGTTTTATTGGAAAGTGGAGATTTCACAGACTGCACGTTTTTCGTCGAGGGAAAA
GAATTCCGAGTTCATAAAGCGATAATTGCAGCTCGTTCTGTGGTTTTCCGAGCAATGTTC
CAACATGAAATGGAAGAGAGAAAACTAAACAAAGTCGAGATTTCAGATATTTCCGCCGAC
GTTTTCCGCGAAATGTTGAGTTTTCTTTACACGGGATCTGCACCGAATCTCGATCAAATG
GCTGCTGAACTTCTTGCTGCAGCTGATAAATACGCTCTGCAAAGATTGAAAGTTATGTGC
GAAGAATCACTGTGTTCCAACTTATCTGTCGAGAATGTTTCCGATATTTTAATACTCGCT
GATTTGCACAACGCGGACCAATTACGAGAGATGGCGATAGACTTTATAAACAGCCATGCA
CTCGACGTCATGGAAACAACAGGATTCGAATCGATGGTCCGCTCCCATGCACACCTAGTG
GCCGACGCATTCCGTGCGCTCGCTGCAATCCAATCACCGCCAGCGGGACCGTCTCGTAAG
AGACTCAAGTCGTCGAATTAGTGGATTTAGTTGCAAGCATTGTGAGTGAAGCAGTGAAGC
CTACCTGTATGTGTGTAACTTTTTCATGAAAATCAGGTCGAAGGTCGCGGGTTGTTGCTC
TTGACTAGAAGATCGATTGGCTATTCTGTGTGTAATCTGTGACCTTTTACACAAGGTCAA
GGGTCGTGAGGGGCAGGTCACACTATATGGAGTGGAAGTGGAGAAAGTGACGTTTGGTAA
ACGAAATATCAAAGCGTTTCTTTGATTTCATGAGGTTAAATAATTGAAAGTTTTGCACAC
TTGGCATCAGTTCTTTGGTTTTATGTAAAGCCATGCTGTCCATGACCATGAGGTCCATGA
CGTCAAACATGAAGTCTTAACAAATTTCATTGACATAGGCGTGCAAACTCATTAACTTGA
TGACGCAAACGATATAGAACTTATTTGACTTTTCTGTCAAGAGAAAATAAACATTTCACA
GTTTCTATAACTTGAATCCCTGGTTGACCCTGGTTTTTTCCCTGACCCAGATATCTCCAA
ACTTCAAACCATATTTTTCATTCATGAAAACTCGGAAACAGAATATTTTCTGTGAGACCT
CCATGTTTTACTTTTATCTTTCCTATATTTTCAACCTAATTTTAAATCTTTTATTCCTGC
ATGAACTGAGCAGTCTCTTAATGATCCAACTCCTTGCAAAATAAGCTTTTTAGATACCAG
GGGTTCTCCATGGTCGGCTGGATTTACTTGCTTGAGGGGGCCCCAGGCCAATCTCATCAC
TGGGCCCCCAAATTTCTACAAATGTTTGCATGTCTCAATAATCAATCAATATATATTACT
GTAATTA
| SUPERFAMILY |
TRAF-like (IPR008974) - T[42-183] 8.99E-46 |
| Gene3D |
TRAF-like (IPR008974) - T[42-179] 3.4E-43 |
| ProSiteProfiles |
MATH/TRAF_dom (IPR002083) - T[44-174] 28.471 |
| SMART |
MATH/TRAF_dom (IPR002083) - T[49-155] 3.3E-14 |
| Pfam |
MATH/TRAF_dom (IPR002083) - T[78-174] 9.6E-7 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[190-308] 8.48E-33 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[204-309] 2.2E-31 |
| SMART |
BTB/POZ_dom (IPR000210) - T[213-310] 1.4E-28 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[213-274] 18.782 |
| CDD |
SPOP_C (IPR034089) - T[310-371] 2.46064E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BTBD9_HUMAN | 31.288 % | 85.1 | 6.8E-18 |
| SPOP_HUMAN | 75.871 % | 573 | 0 |
| SPOPL_HUMAN | 72.89 % | 568 | 0 |