- Clone 'AHC0AAA129YL03' >
- Transcript 'KH2012:KH.C10.10.v1....' >
- Transcript 'KH2012:KH.C10.10.v1....' >
- Transcript 'KH2012:KH.C10.10.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S113.g15961.01.t
Possible name(s)
DMC1; RAD51; RAD51B
Gene model
Location
S113 [70,467 / 71,956]
Amino acid sequence
Length: 334
>Harore.CG.MTP2014.S113.g15961.01.p
MQEAQESSINDEDAIGPIHVSKLEQSGINASDIRKLEAQGYYSVEAVAYAPKKELLQVKG
ISEAKADKLIIEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGLETGSITEL
FGEFRTGKSQICHTIAVTCQLPVNQGGGEGKCMYIDTEGTFRPERLLAVADRYGLSGPDV
LDNVAYARAYNTDHQTQLLIQAAAMMSETRYSLLIIDSATALYRTDYSGRGELSARQMHL
ARFLRTLLKLADQFGVAVVITNQVVAQVDGGAMFASDPKKPIGGNIIAHASTTRLYLRKG
RGETRICKIYDSPCLPESEAMFAINADGIGDAKD
Nucleotide sequence
Length: 1,005
>Harore.CG.MTP2014.S113.g15961.01.t
ATGCAGGAAGCGCAGGAGTCCAGCATTAACGACGAAGATGCCATCGGCCCAATCCATGTT
TCTAAACTTGAACAAAGCGGAATCAATGCGAGCGATATACGCAAACTCGAAGCCCAGGGT
TACTATTCCGTTGAAGCTGTTGCGTATGCTCCAAAGAAAGAACTACTACAAGTTAAAGGT
ATCAGCGAGGCAAAAGCTGATAAATTGATTATTGAAGCAGCTAAACTGGTCCCGATGGGC
TTCACTACAGCAACAGAATTTCATCAACGAAGATCGGAAATAATACAGATTACGACGGGA
TCAAAGGAGCTTGATAAACTTCTGCAAGGAGGTTTGGAAACCGGCTCAATCACAGAATTA
TTTGGAGAATTTCGTACCGGAAAGTCACAAATATGTCACACTATCGCGGTTACTTGCCAA
CTTCCTGTCAATCAAGGAGGTGGGGAAGGTAAATGCATGTATATTGACACAGAAGGTACT
TTTCGTCCTGAGCGCCTACTTGCAGTTGCAGACCGGTATGGTCTGAGCGGTCCAGACGTC
CTGGACAATGTAGCTTACGCCAGAGCATACAACACTGATCATCAAACGCAACTTTTAATT
CAAGCTGCTGCAATGATGTCGGAGACTAGATACTCTCTGTTGATAATCGATAGCGCCACA
GCTTTATATAGGACGGATTACAGTGGAAGGGGTGAACTTTCAGCGAGACAGATGCATCTT
GCACGATTTTTAAGAACTCTTCTTAAATTAGCAGATCAGTTTGGTGTAGCTGTAGTCATC
ACAAATCAAGTCGTGGCTCAAGTAGACGGAGGCGCCATGTTCGCTTCAGACCCCAAAAAA
CCTATTGGAGGCAATATAATAGCCCACGCTTCTACGACACGACTTTATTTACGAAAAGGA
AGAGGTGAAACAAGAATATGCAAGATCTACGACTCGCCATGCCTACCCGAGTCGGAAGCA
ATGTTTGCAATTAATGCTGATGGTATTGGCGATGCAAAAGACTGA
| PIRSF |
DNA_recomb/repair_RecA-like (IPR016467) - T[5-334] 4.3E-141 |
| SUPERFAMILY |
DNA_repair_Rad51/TF_NusA_a-hlx (IPR010995) - T[15-80] 1.08E-15 |
| TIGRFAM |
DNA_recomb/repair_Rad51 (IPR011941) - T[20-334] 1.7E-182 |
| Pfam |
DNA_recomb/repair_Rad51_C (IPR013632) - T[79-331] 1.5E-129 |
| ProSiteProfiles |
RecA_ATP-bd (IPR020588) - T[93-264] 50.01 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[96-331] 3.39E-61 |
| CDD |
Rad51_DMC1_RadA (IPR033925) - T[97-330] 5.44921E-148 |
| SMART |
AAA+_ATPase (IPR003593) - T[114-301] 1.1E-9 |
| ProSiteProfiles |
RecA_monomer-monomer_interface (IPR020587) - T[271-334] 21.824 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMC1_HUMAN | 51.952 % | 340 | 1.43E-116 |
| RAD51_HUMAN | 84.036 % | 596 | 0 |
| RA51B_HUMAN | 26.627 % | 111 | 8.05E-28 |