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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.52.v1....' > 
  2. Transcript 'KH2012:KH.L18.125.v5...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S11...' > 
  4. Transcript 'Boleac.CG.SB_v3.S614...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S113.g12469.01.t

Possible name(s)

CSTF1; NOL10; WDR83

Gene model

Harore.CG.MTP2014.S113.g12469

Location

S113 [103,384 / 108,172]

Sequences

Amino acid sequence

Length: 788

>Harore.CG.MTP2014.S113.g12469.01.p
MQVSNPNNIKIYNLSCGKSLPQFISDYKRRNLQKNDVNLRRRIELIQDFEMPTVSTKVGM
TEDGNYIFVAGTYKPRIRCYDVHDLSLKFERCLDSEVITFHTLSEDYSKIAMLLNDRYIE
FHSQEGRWYRVRMPKFGRDMTYHSANCDLYLVGAGSEIYRLNLDHGKFYESFKTKAFELN
VCELNSAHHLLAVGTIDGKVECFDPRSRQSVGILDCAVSIADESKSIEKCPQITSLRFKD
PLHIAVGTSQGQILLYDIRTNSPYAVKDHYYDLPIHSIDFNKENEVVLSSDQRCVKIWDD
KTGKAVTAIETKHDINDMHLVRNSGLMFLANESPKIQTYFVPMLGPAPKWSSFLDNLTEE
LEENPTQELYDDYKFVTTKELEELGLTHLIGSSLLKAYMHGYFLDMRLYNKAKTIANPFA
YDEYRKKKIRERMEENRVNRVQVKKLPKVNKGFAQRLISQAEEENLNSGKKKKLKKEASS
LLSDSRFKSMFENPDFEINEESDEFQLIKPVLSKQHEKEKRKRRETNEDKVTTGPEKTYN
FQSEYPGQDDLSDEEMERKYKEEMRLAHRKIYNKKHIEMQNRLEKDEGTTLQPTLYQLKS
NNKFSTFGNFSKINQKRLKEDRKKLRTTLEERIQQEEDNTPSGAKKAVGAKQMTFRIQKR
RTIKGQKISQALAEDKSETKLLPEVNNECGRLNNMYIYHQINVTLLVLFFLFLKYRNLRR
KIVCQAIKPWLFVLKIVPGCITTARYCVNVHLETEVSFVLLKFVKTKFSMPDRPDKFSFL
QSHKHISK

Nucleotide sequence

Length: 2,367

>Harore.CG.MTP2014.S113.g12469.01.t
ATGCAAGTATCCAATCCAAACAATATTAAAATATACAATCTGAGCTGCGGGAAATCCCTT
CCTCAATTTATATCTGACTATAAGAGGCGTAATCTCCAGAAAAACGATGTTAATCTTCGA
AGGAGAATCGAACTTATACAAGATTTTGAAATGCCAACAGTGAGCACTAAAGTTGGGATG
ACAGAAGATGGAAATTATATTTTTGTGGCTGGTACATACAAGCCGAGGATTCGATGCTAT
GATGTTCATGATTTGTCATTGAAATTTGAAAGGTGTCTAGATTCTGAAGTGATTACATTT
CATACTCTCTCTGAGGATTATTCGAAGATCGCAATGCTGCTGAATGATCGCTATATCGAA
TTCCATTCTCAAGAGGGCAGGTGGTATCGAGTGCGAATGCCCAAATTTGGAAGGGATATG
ACCTACCATTCAGCGAACTGCGATTTGTATCTTGTGGGAGCTGGGTCAGAAATATATCGA
TTGAATCTTGACCATGGAAAGTTTTATGAATCCTTTAAGACAAAGGCTTTTGAGCTAAAT
GTGTGTGAACTGAACAGTGCTCATCACTTACTAGCTGTAGGAACGATAGATGGAAAAGTG
GAATGTTTTGATCCCAGGTCAAGGCAATCAGTTGGAATTCTGGATTGTGCTGTGTCCATA
GCGGACGAGAGTAAAAGCATTGAGAAATGCCCACAGATAACATCACTTAGATTCAAAGAC
CCATTGCATATTGCAGTTGGTACAAGCCAAGGACAGATTCTTTTGTATGACATACGCACA
AATTCTCCGTATGCTGTGAAGGATCACTATTACGATCTTCCTATTCATTCCATTGACTTC
AACAAAGAAAACGAAGTTGTTTTATCTTCAGATCAAAGATGTGTTAAAATCTGGGATGAT
AAAACAGGAAAAGCTGTGACAGCCATCGAAACAAAGCACGACATAAATGACATGCACTTG
GTCCGAAATTCAGGTCTTATGTTTCTTGCAAATGAAAGTCCAAAAATTCAAACATACTTT
GTTCCAATGCTGGGACCTGCACCGAAGTGGTCATCGTTCTTGGACAATCTAACGGAGGAA
CTGGAGGAGAATCCTACACAGGAACTCTACGATGATTATAAGTTTGTGACAACGAAAGAA
TTGGAAGAACTTGGTCTCACTCATCTGATTGGATCCTCGCTACTGAAAGCCTACATGCAT
GGATATTTCCTAGACATGAGGTTATATAATAAAGCCAAAACAATAGCAAATCCATTTGCT
TATGACGAATACAGGAAAAAGAAAATCAGGGAAAGAATGGAAGAGAACAGAGTCAATCGT
GTTCAAGTTAAGAAATTACCGAAAGTAAACAAAGGCTTTGCTCAACGTCTCATAAGCCAA
GCTGAAGAAGAAAATCTAAATAGCGGGAAGAAGAAAAAACTAAAGAAAGAAGCAAGCTCT
TTGTTGTCGGACAGTCGTTTCAAATCGATGTTTGAAAATCCTGATTTTGAAATAAACGAA
GAATCTGACGAGTTTCAGTTGATCAAGCCCGTCTTGTCTAAGCAACACGAAAAGGAAAAA
AGAAAACGTCGGGAAACGAACGAAGACAAAGTTACGACCGGACCTGAAAAGACTTATAAT
TTCCAGAGTGAATACCCAGGTCAGGATGATTTATCTGATGAAGAGATGGAAAGAAAGTAC
AAAGAAGAAATGAGACTTGCGCATAGGAAGATATATAACAAGAAACATATAGAAATGCAG
AATCGTTTAGAGAAAGATGAAGGAACAACTCTACAACCGACACTCTATCAGCTGAAGTCT
AATAACAAATTTAGTACTTTTGGGAACTTTTCCAAAATTAATCAGAAGAGGCTCAAAGAG
GATAGGAAGAAATTACGCACAACTCTTGAAGAAAGAATCCAACAGGAAGAAGACAATACG
CCAAGCGGAGCAAAGAAAGCAGTTGGTGCTAAACAGATGACATTTAGAATCCAAAAGAGA
AGAACGATTAAAGGTCAGAAGATCAGCCAAGCACTTGCAGAGGACAAAAGTGAAACAAAA
CTTCTTCCAGAAGTGAATAACGAATGCGGTCGCTTGAACAACATGTACATCTACCACCAA
ATCAATGTGACACTACTGGTATTATTTTTTTTGTTTCTTAAGTACCGAAATCTCAGAAGG
AAAATTGTATGTCAAGCAATCAAACCCTGGTTGTTTGTTCTGAAAATTGTCCCAGGGTGC
ATTACCACAGCCCGATATTGTGTCAACGTTCATTTGGAAACTGAGGTCTCCTTTGTCCTA
CTTAAATTTGTCAAGACAAAATTCTCTATGCCTGATAGGCCTGACAAATTTAGCTTCCTA
CAAAGTCACAAACACATTAGTAAATGA

InterProScan

SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[38-337] 2.2E-27
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[46-221] 7.9E-8 - T[222-342] 1.0E-8
Pfam
NUC153 (IPR012580) - T[484-511] 4.4E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOL10_HUMAN 51.56 % 701 0