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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S113.g10156.01.t

Possible name(s)

CHSY1; CHSY3; CSGALNACT2

Gene model

Harore.CG.MTP2014.S113.g10156

Location

S113 [8,488 / 13,480]

Sequences

Amino acid sequence

Length: 858

>Harore.CG.MTP2014.S113.g10156.01.p
MKRISLKVTVNFLFGLLGGVLICNFVSNHRSVRCLTSDSIYPEIRHSDLIGLRHGKIPHR
SNIYLGMMSAAKFLTTRVQRNVDTWLQKGGWKIEVFADAEPSLNIPAGMDINIVTLPTVD
DTAYPPQKKSFLLLRHMHDYHINDYEWFIRADDDAYFDFPRLETLLNTLNSSQSIFLGNP
GFGMDEDDGIEEGMKYLMGGLGMIFSRGLLREIRPHLKHCIQHLFSPHEDIEIGRCVWKH
TKAITPVAWETIDLFYQQYDKETGAVIDIILDQLTPVRTAKTITYHSVKTSELMYRLHNQ
VLRRELSNMLNRTARLRNQIDHMRKIINVHEAHGSSDLNLMLPLLMGDAGKASWLQNGNP
WPDDTPWHAQNASISRISSTIPWMYWDIYYRNDLTSELVPVRGHSKVEKNMIKTLLADIE
GSLLHQACPNFPPNVHFNYGYLQHGTLEGVKVVTVHRSTAGSTIKYCRTVSQMTYAVTMF
GEDSPLKNHKKMKAVIESQQGIHDFFGVRDNPVLNGPAGAGARHKYQAAVPLQNSFSTFP
SRSSKIIITIPLQGRYRALEQFMDNYEKNFLKPALHTSVFDRDIQYNVQLAIVLLGNDEQ
GDDLGLNRAAAHLLRSYQMTYGLQLVHYHMASTGDRSFSRGAGLQLGSLIGEEGDILFFM
DIDMVVTPNLLAQCRRNVKRGEKAWYPSPYSQYDPDKLCYNDEVAKDINRIGNVDLVYAG
GGGPVFKEDISDERLQIRNAIKQTPLTLSTERGFWRDFGFGITCLYKSDFLATGGFDLTI
EGWGEEDIRLFLSLIKSGLDVFRARQVDLIHIFHNKYCDQDISEEQRQACLRTKASHYAS
QKCLAKTWYLKQALKAKS

Nucleotide sequence

Length: 2,974

>Harore.CG.MTP2014.S113.g10156.01.t
AGACTCTGAGATTGAACAGTAGTTATGTAAACAATGCTGACGTCTTATATCATCATTTAG
TGAGGTTATCAAATATTCAAGAACAACTGTGGACTTGTCGACTTGCCGAAACCTTCGTCA
GCTCTCATCAGCTCAGGAGTAAAAGGAAATCCCATAATATTAGTTTTATTTATAACTAAC
TAAAATGAAAAGAATATCCCTGAAAGTCACAGTCAATTTTCTTTTCGGACTCCTCGGCGG
TGTGCTGATTTGCAACTTCGTTTCCAATCATAGAAGCGTAAGATGCCTCACGAGTGATTC
CATCTATCCTGAAATACGACATAGCGATTTGATCGGATTGCGTCATGGAAAAATACCTCA
CAGATCTAATATTTATCTTGGTATGATGTCAGCAGCGAAGTTTCTTACAACTCGGGTTCA
GAGGAATGTCGACACGTGGTTACAGAAAGGAGGGTGGAAAATCGAAGTATTCGCGGATGC
AGAACCATCCTTAAATATTCCAGCCGGAATGGACATTAATATCGTCACTCTTCCCACTGT
CGATGACACAGCCTATCCACCCCAGAAAAAGAGCTTTCTTTTACTTCGTCACATGCACGA
CTATCACATCAATGATTATGAGTGGTTTATAAGGGCTGACGATGACGCCTATTTTGACTT
TCCTCGACTCGAAACGCTGCTTAATACGCTTAATAGCAGCCAGTCGATATTTCTCGGTAA
CCCTGGATTTGGAATGGATGAAGATGATGGTATTGAAGAAGGAATGAAATATCTAATGGG
TGGACTGGGCATGATATTCAGTCGGGGCCTGCTCCGTGAAATTCGACCGCATCTCAAGCA
CTGTATACAGCATCTTTTTTCTCCTCACGAAGACATCGAAATAGGACGCTGTGTGTGGAA
ACACACGAAAGCAATAACACCCGTGGCATGGGAGACAATAGATCTGTTTTATCAACAGTA
TGATAAGGAAACAGGAGCTGTTATAGACATCATATTAGACCAGCTAACACCGGTTCGAAC
CGCCAAAACAATAACCTATCATTCGGTTAAAACGTCTGAACTGATGTATCGCCTCCACAA
TCAAGTGCTTCGCCGAGAACTCAGCAATATGCTGAATCGAACAGCTCGCTTAAGAAATCA
AATCGACCACATGCGAAAGATTATAAATGTACATGAAGCTCATGGAAGCTCGGATTTGAA
TTTAATGCTTCCATTGTTAATGGGGGATGCGGGTAAGGCTTCCTGGTTGCAAAACGGTAA
TCCATGGCCGGATGACACACCGTGGCATGCTCAGAATGCTTCAATCAGTAGAATATCTTC
GACCATACCCTGGATGTATTGGGACATTTATTACAGAAATGATCTTACATCTGAGCTAGT
CCCGGTGAGAGGTCATTCAAAAGTGGAGAAAAATATGATAAAAACCCTGCTTGCTGATAT
AGAGGGCAGTTTGCTGCATCAAGCTTGTCCTAACTTTCCACCAAATGTTCATTTTAATTA
CGGATATTTACAACATGGAACTTTGGAAGGAGTTAAAGTTGTCACGGTGCATCGTTCTAC
TGCCGGATCAACGATCAAGTATTGCAGAACTGTATCTCAGATGACATATGCAGTAACCAT
GTTTGGAGAGGATTCTCCATTGAAAAATCACAAAAAAATGAAGGCGGTAATCGAATCACA
GCAAGGAATCCATGATTTTTTCGGTGTTAGAGACAATCCAGTGTTGAATGGCCCCGCTGG
GGCGGGAGCCAGACACAAATATCAAGCAGCAGTACCTTTGCAGAATAGTTTTTCCACTTT
CCCATCAAGAAGCAGTAAAATTATCATAACAATCCCATTGCAAGGACGTTACAGAGCGCT
TGAACAGTTCATGGATAATTATGAGAAAAACTTCTTGAAACCCGCTCTACACACTTCTGT
TTTTGACCGAGACATCCAGTATAATGTCCAGCTCGCCATAGTGCTTTTAGGTAATGATGA
GCAAGGTGATGACTTAGGTTTAAATCGAGCTGCTGCCCATCTATTGAGGAGTTATCAGAT
GACCTATGGATTGCAACTGGTTCACTATCACATGGCATCTACTGGTGATCGCTCATTTTC
AAGAGGTGCTGGTCTTCAACTGGGATCATTAATTGGCGAAGAAGGTGATATATTATTTTT
CATGGACATCGATATGGTCGTCACACCTAACCTATTGGCTCAGTGTCGACGTAATGTAAA
ACGTGGCGAAAAGGCTTGGTACCCAAGTCCATACAGTCAGTATGATCCAGACAAGCTTTG
CTACAATGATGAGGTAGCCAAAGATATTAACAGAATTGGAAATGTGGACTTGGTGTATGC
AGGTGGAGGCGGACCAGTTTTTAAAGAGGATATATCTGATGAACGGCTTCAAATTAGAAA
TGCTATTAAGCAGACACCTCTTACACTTAGTACTGAGCGTGGTTTCTGGCGAGACTTTGG
TTTTGGAATCACCTGTTTGTACAAATCAGACTTTCTTGCGACTGGGGGTTTCGATCTCAC
AATTGAAGGGTGGGGCGAAGAGGACATTAGGTTATTCCTTTCTCTCATAAAATCGGGACT
CGATGTGTTTCGAGCACGGCAGGTCGACCTTATTCACATATTCCATAACAAATACTGTGA
CCAGGACATCTCTGAAGAACAGAGGCAAGCGTGCCTGCGTACTAAGGCAAGCCACTATGC
TAGTCAAAAATGCCTTGCTAAAACTTGGTATCTTAAGCAAGCTCTGAAAGCTAAATCATA
ACTTCAGTATTTTTAGTTACTTGCTTGTATTATTTGTGTGACCTCAATGCCGTGCAATCG
TACTTTATTAGCTTTTTAAGTCATCTATCCTGTAGGTGTTCTAGTATTTATTGCGTATGA
ACTCACACTGTATTAACTTTGTATTGTATTACTACTAAATATTTTAATTCAAAATCATGA
AAAGTCGTTAATAAAATGACCGTTTTGTATAGGA

InterProScan

Pfam
Chond_GalNAc (IPR008428) - T[216-844] 2.3E-101
SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[546-582] 9.9E-18 - T[633-694] 9.9E-18 - T[752-835] 9.9E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS3_HUMAN 35.439 % 192 8.41E-51
CHSS1_HUMAN 27.95 % 321 4.35E-97
CGAT2_HUMAN 31.023 % 142 1.57E-35