- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S111.g12540.01.t
Possible name(s)
AC011499.1; DUS1L; DUS3L
Gene model
Location
S111 [72,500 / 76,717]
Amino acid sequence
Length: 582
>Harore.CG.MTP2014.S111.g12540.01.p
MTENVEPGTARVKQEFVIDPPKINADVTSTDKDEPPKKRHRGQNKNRPRTKRISIEESLC
PSLVSETGVCTFGEKCRYIHDVKKYMAIKPHDLGNECYSYKTHGKCNFGFACLYGSNHII
TNDEGEYKNKIDESILGSNPPPKILNEASKELRNTLRKKKFQFPKANAFLKDKQNVKIES
KFESLPISANDICGVNGKDANVEMGEKRILATSGTVTDEDIIKIKPEEKRQINFKDKLYL
APLTTCGNLPFRVICKSFGADVTCGEMAMATSLLQGNTSEWALLKRHPSEDIFGIQVCGA
FPDSMARCCELISQTCEVDFVDINMGCPIDLVFKKGSGCALMQRKKKLFNIVNSMNGVLD
IPLTCKMRAGIESKKNTAHTILPQLRDLGVSLVTVHGRSREARYTKSPDWNYIEECAKHA
SPMPLFGNGDVMSYEDYNAHMENKSVSGIMIGRGALIKPWLFTEIKEQRHWDISSSERLA
TLQKYVNMGLLHWGSDNRGVETTRRFLLEWLSFLHRYIPLGVLERVPQQINEQPPYYVGR
DDLETLMASPNCNSWVKISEMLLGPIPDNFQFLPKHKANSYK
Nucleotide sequence
Length: 3,375
>Harore.CG.MTP2014.S111.g12540.01.t
GTATTAAGGTTGCGTTTAACGGGTTAATAATCGACTTATAATACAAAAACGTGGAGAAAT
TGTAAGTAAAACGAGTGCAAGAGCGGTACAGCAGTTGTCTTAAGACAGTTAAATTATTTG
GAAAATTATAGAATGACAGAGAACGTGGAACCTGGAACTGCTAGAGTGAAGCAGGAGTTC
GTTATTGATCCTCCAAAAATAAATGCTGATGTCACTTCCACTGATAAAGATGAGCCACCA
AAGAAACGTCACAGAGGACAAAATAAAAATAGACCACGTACTAAGAGAATCAGCATTGAG
GAAAGCTTGTGCCCAAGTTTAGTTAGCGAAACTGGTGTTTGCACATTCGGTGAAAAATGC
CGATATATTCACGATGTAAAGAAGTACATGGCGATCAAACCACATGACTTAGGGAATGAG
TGTTACTCCTACAAAACTCATGGAAAATGCAACTTTGGATTCGCATGCCTATATGGTTCC
AATCACATAATAACAAATGATGAAGGTGAATACAAGAATAAGATTGATGAATCGATACTT
GGATCAAATCCACCACCCAAGATTCTCAACGAAGCTTCAAAAGAACTACGGAACACTTTA
CGGAAAAAAAAGTTCCAGTTTCCGAAAGCTAATGCATTTTTGAAAGATAAGCAAAACGTG
AAAATTGAGTCTAAGTTTGAATCGCTGCCCATCAGCGCGAATGACATCTGTGGAGTGAAC
GGCAAAGATGCAAATGTGGAAATGGGCGAGAAAAGAATACTAGCAACCAGTGGAACTGTA
ACTGATGAGGATATAATAAAAATAAAACCTGAAGAAAAGCGTCAAATAAATTTCAAAGAC
AAGTTGTATCTAGCTCCACTTACTACGTGTGGGAACCTACCTTTCCGTGTTATATGTAAA
TCATTTGGAGCAGATGTAACTTGCGGTGAAATGGCAATGGCAACTAGTTTGCTCCAAGGT
AACACCTCAGAATGGGCTTTGTTGAAACGTCATCCAAGTGAAGATATATTTGGCATTCAG
GTCTGTGGTGCTTTTCCTGATTCAATGGCCAGATGCTGTGAACTTATTAGTCAAACCTGT
GAAGTTGATTTCGTCGATATCAACATGGGATGCCCGATCGATTTGGTGTTTAAAAAAGGG
TCTGGTTGTGCATTAATGCAGAGGAAAAAGAAATTATTTAACATTGTCAACAGCATGAAT
GGAGTTCTTGATATCCCCCTAACTTGTAAAATGAGAGCAGGAATAGAAAGTAAAAAGAAT
ACAGCGCATACTATATTGCCTCAATTACGTGATCTCGGAGTATCTCTAGTCACTGTTCAT
GGAAGGTCTCGGGAAGCAAGGTATACAAAATCTCCGGATTGGAATTACATTGAGGAATGT
GCAAAACATGCATCACCTATGCCCCTGTTCGGAAACGGTGATGTTATGTCATATGAAGAC
TACAATGCACACATGGAAAACAAAAGTGTATCGGGCATTATGATTGGAAGGGGAGCGCTT
ATCAAGCCATGGCTCTTTACCGAAATCAAAGAGCAGAGACATTGGGATATATCAAGTTCA
GAGCGTTTAGCTACCCTACAGAAATATGTGAACATGGGTTTACTACATTGGGGATCAGAC
AACAGAGGCGTGGAAACTACACGACGTTTTTTACTTGAATGGCTATCATTTCTTCATCGT
TACATACCTCTTGGAGTCCTTGAGCGTGTACCCCAGCAAATCAACGAGCAACCGCCTTAT
TACGTTGGGAGAGACGACTTGGAAACCCTAATGGCAAGTCCGAATTGCAACAGTTGGGTG
AAGATCAGTGAAATGCTGTTGGGACCAATTCCAGACAATTTCCAATTTTTGCCAAAACAT
AAAGCTAATTCGTATAAATAGGTTGCCTACTCTTTTCATGGTATTATTTGGTTAAGTGAA
ATTCCTCATCATTTTTCCTAATTTCGAGTGCCAAGAAACCATTGCATTGCAAAATTGTGT
GTTTAATTGTAGTCATACAAATTATCATCACAAAGCATTTATTATTATATGCTGCTTATA
ATTAGCAGCATAAAAACACAGACTGCATAGAATGACAGGGATAAAATTAATTGCACATAC
ATATATATGAAGCAACACCAAGAAAGCACCTCACACCAGTAGTAGTGCTTCTATAAAATA
GCATAAGTCATTCTTGATTTTACCCAAAAATTAGTTGGAGGTAAAGAGTTTGAACATTTA
AACGTTTGTTGATGTTTCAAACTTAGTGAAGTATCACAAACCTTTGTTAAAATATACAGT
ATCAATTGTCTTACCATACTTCTTTTTCACTGATGCCTGCACATCAGTCTCTAAATTTTC
AAATGAATATGGGCATTTTTGGGGGAATAAAGAACAAGCAACGGGCACCATGAATAATAA
AATTCCGCCCAGACCTAAAACCTGGAAAGGTAAGTGCAACCACCTCATCCGTTTGAAGGA
TGGGAATTTTTCAAGTCTCTCCATAATAACTGGTAGCAAAAGCATTCCAGGGGCGGCCAT
AAGAATTCGCGAAGCAACGACTTGAGATATCCCAGTGATGGCACATTTCCTGGATGTTCC
TATCGGGTTGTCATTCTCGTCAGTGATAACGACACCGTTGATTAATTCACTTTGTCTGGT
CAGTGGAATGTTGACTGCGTTGGCAGATGCAACAGCTGCAAATGGGACCCATCTTACAAT
GATTGGACTTGCTCTAGCTGCATACCTATTGAGACTTATTGCAACCCCGAGAGCAGTTGA
TGTAGCTGTGCCATATGCTACTAACATTTGCTTAGTAGAGATGCTTGAAGCAGCGTTTCT
GTTCGTATAATTTACAAGTGCGTTGAAACTCTGATTCAACCACTGCATGAGTGCAACCTG
TCCCGGTGTTTTATAAAACTGGAGTAGGAGTCCGGTGATAGCCATACCACCGGGCACCTG
AAATGACATGCGTCCAAAAATATTCATCAGTTCCCCTGAATCCGGATGATAAGCAGAATC
ATACAAGTGTTTTGCCCGCCATATCTGTTCTTCCGTCGTACCTTTGGGAAGCATCCCTCT
TCTAAAGTCGTTTATTAGAGATTTAGCTTCTCCTATTTCCTTTGTAGATGACAACGAAAA
TCGGGGGTCGGTGATGCTTGCAAAATGTTTCAACCTCCCAACGAACGTCCTCTGGTCCCA
ACGAGGCTCGTTAATATCTATTTTATAAATTTCATTTCCAGATTCAAGTTCATCCATAAT
TTGGTCATTCATTCCTTCAGTATAGCGAATAAATCTTAAGTAATACTGTTGTAATTTCAA
ATTTAGTACGAAACGCTTTGCCCGGTTTAGAAACAAACACTGACGTGGGCTGTCAATCTC
GTGTGTGTAGCGATG
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[59-83] 11.432 - T[96-121] 8.127 |
| PANTHER |
tRNA_hU_synthase (IPR001269) - T[173-582] 4.4E-205 |
| Gene3D |
Aldolase_TIM (IPR013785) - T[232-473] 5.0E-82 |
| CDD |
DUS-like_FMN-bd (IPR035587) - T[237-470] 1.86135E-103 |
| Pfam |
tRNA_hU_synthase (IPR001269) - T[240-476] 7.6E-58 |
| ProSitePatterns |
tRNA_hU_synthase_CS (IPR018517) - T[321-339] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DUS3L_HUMAN | 53.477 % | 654 | 0 |
