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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S460.4.v2....' > 
  2. Region 'REG00000072' > 
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S111.g12376.02.t

Possible name(s)

FGF16; FGF20; FGF9

Gene model

Harore.CG.MTP2014.S111.g12376

Location

S111 [114,135 / 116,907]

Sequences

Amino acid sequence

Length: 359

>Harore.CG.MTP2014.S111.g12376.02.p
MHWILLLYCRRIANPLPIPNTHPDRRKRSKKYSQVKSVISSLLEINFSINFRHFIFLLIA
LTMCSHQVSSFAIQSNKLSEPLIQNQIREDLHFSHSSSNGILSRNSHRDNEVIINQPPDQ
AISENCILCRVIENRMAQRKTSLLRKKQRALSRLGNNSWIKDTLKGSSQRILNPHETNFE
IPNILRTSRSQATPISKALIRQVNAYLSASHSRTRRMAGDRKLRKLYSKHGFLLEILPNG
KVRGTYDAQSKYAVLEIQSVDRGSVVAIQGRETGLYLSMTKSGALHGSVNYSPEHSTFVE
RIAEGWHNTYAAWKLPKSKRRNRKRKTWYVGLSKQRKAKKGSKVSRSSNSSHFLPLPVE

Nucleotide sequence

Length: 1,080

>Harore.CG.MTP2014.S111.g12376.02.t
ATGCACTGGATATTACTGCTCTATTGTCGAAGAATAGCAAATCCTTTACCAATTCCAAAC
ACTCATCCAGATCGACGAAAGAGGAGCAAGAAATATTCTCAAGTCAAATCAGTGATTAGC
AGCCTACTTGAAATAAACTTTTCGATCAATTTTCGACATTTTATTTTTCTCTTGATTGCA
CTGACGATGTGCTCGCATCAAGTATCATCGTTTGCTATCCAGTCAAACAAACTATCGGAG
CCGTTGATTCAAAACCAAATTCGTGAGGATCTACATTTTTCTCATTCTTCTTCAAATGGT
ATTTTGAGCAGAAATTCCCATAGAGACAATGAAGTAATAATAAATCAGCCACCCGACCAA
GCAATATCAGAAAACTGTATACTATGTCGAGTAATAGAGAATCGTATGGCACAACGAAAG
ACCTCATTATTGCGAAAGAAACAACGAGCGTTATCAAGACTAGGTAATAATTCTTGGATC
AAGGATACACTGAAAGGATCAAGCCAACGCATCTTAAACCCCCATGAAACGAATTTTGAA
ATTCCCAATATATTGCGAACCAGTCGTTCACAAGCAACGCCGATTTCGAAGGCGCTTATA
CGGCAGGTTAACGCCTACTTGTCGGCCTCCCACTCACGTACAAGGCGAATGGCCGGCGAC
AGAAAATTAAGAAAATTGTACAGTAAACATGGATTCCTTCTTGAGATTTTGCCTAATGGG
AAAGTACGCGGTACCTACGACGCCCAAAGTAAATATGCTGTACTGGAAATTCAATCCGTA
GACAGGGGTAGTGTTGTGGCAATACAAGGTCGGGAAACTGGACTGTACCTATCCATGACC
AAGTCTGGAGCTCTACATGGATCGGTTAACTATTCTCCAGAGCATAGTACGTTTGTTGAG
AGAATTGCAGAAGGATGGCACAACACATACGCGGCATGGAAATTGCCTAAGTCAAAGCGT
AGGAATCGAAAACGCAAAACTTGGTATGTGGGCTTAAGCAAACAAAGGAAGGCGAAGAAA
GGTAGCAAGGTTTCCCGCAGTAGCAATTCTTCCCACTTTCTTCCTCTCCCGGTCGAATAA

InterProScan

PANTHER
Fibroblast_GF_fam (IPR002209) - T[184-358] 7.7E-41
SUPERFAMILY
IL1/FGF (IPR008996) - T[217-358] 2.55E-35
SMART
Fibroblast_GF_fam (IPR002209) - T[220-357] 1.0E-31
Pfam
Fibroblast_GF_fam (IPR002209) - T[223-354] 8.2E-34
CDD
Fibroblast_GF_fam (IPR002209) - T[224-357] 4.10322E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FGF16_HUMAN 37.931 % 95.5 3.26E-23
FGF9_HUMAN 30.332 % 97.8 5.67E-24
FGF20_HUMAN 38.406 % 92 6.34E-22