- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g14661.01.t
Possible name(s)
TBC1D15; TBC1D17; TBC1D25
Gene model
Location
S10 [331,001 / 336,958]
Amino acid sequence
Length: 666
>Harore.CG.MTP2014.S10.g14661.01.p
MDEIPDTKIIFERTGVFIYTNSEDNEESDVLVGGKLFVTELDTKRFVEWMPYATNDRTIQ
DHEDTYDLDGDSNAVINSQKVERESTSSTSEYHSIDPEWTLVNNGDNMVAFLKADKDGKK
IDRNPGLSNINEIESIKKSGKGLAWPNLTLIRKDGSSLPPLHFHQKGCKKFIQTLKIYAY
ITPSAKDPLELLLTHHDENALTRSFDELQLFNSTSSTGEDNISKLKNPGSFALRSFSKVT
NFLQDMFVQNEQDTRPPQETAEVLHQDSLEAIGASRIQIKHGKEQSNGFEVITCAQLGPR
PEEPRGSPVSFELLQTHKDEDGRIHRVDELKWAILKGGIEPELRKELWKYLLKYYEWNMT
HKELVERRKSREDDYYRMKMQWKSIDEEQQKRFSTLRERKCLIDKDVIRTDRTRMFYKED
GNLSLKLLFDILMTYCMHNFDLGYVQGMSDLLSPLLEVMENEVDAFWCFVGYMNLVHHNF
EANQAGMKQQLGDLRVLLQFMEPQLWDHLQEKESSNLYFCFRWLLIHFKREFSYEDIQSV
WELLWTGLPCYNFHLLICIAILETEKPNLMKPESWTEPSARPMGYTASSLLASKIYQTPF
DTFSGLMSERQNQLDNVSFGRSKLYNARSRHESVLNQQFTIKLLYFSFRVMRLKKDNIAN
SSSILL
Nucleotide sequence
Length: 3,247
>Harore.CG.MTP2014.S10.g14661.01.t
GGAAACCACATGACCCATATAATCCAGTGACGTCAGTGATAAACAAAACAAAGCTTATGA
CTGATCTGACTGGTCAAACTCTTCTAAATTGAGCAGAGTTTCATTTCACATTTATCGATT
ACAAGAAAGCGATGAGTATTTGGTGTTAAATATTGAATAAATTAGTCTCAGGTTCACGTA
TGATTAAGACATGGATGAAATTCCAGATACGAAGATCATATTTGAAAGGACCGGGGTATT
CATTTATACAAACAGTGAAGATAATGAAGAATCAGATGTTCTAGTTGGAGGAAAGCTCTT
TGTAACAGAACTAGATACAAAAAGATTTGTCGAATGGATGCCATATGCCACCAACGATAG
AACTATCCAGGATCATGAGGATACTTATGATCTTGATGGCGACTCAAATGCAGTGATTAA
TTCACAAAAAGTTGAAAGAGAGTCAACAAGCTCAACGTCGGAATATCACTCTATCGATCC
AGAGTGGACTCTGGTGAATAACGGCGACAATATGGTTGCATTTTTAAAAGCTGACAAAGA
TGGAAAAAAGATTGACAGGAATCCGGGCCTTTCGAATATTAACGAGATTGAGAGTATAAA
GAAATCAGGCAAAGGTCTAGCTTGGCCAAATCTGACACTGATTCGCAAAGATGGATCGTC
GTTACCACCCCTTCACTTCCATCAGAAGGGATGCAAAAAATTCATTCAAACCCTCAAGAT
ATATGCTTATATCACGCCATCGGCCAAAGATCCTCTGGAGCTTCTTTTGACACATCATGA
TGAGAATGCACTTACAAGATCCTTTGATGAGCTGCAACTCTTCAATTCTACATCGTCCAC
AGGAGAGGACAACATAAGTAAACTGAAGAATCCAGGAAGTTTTGCCTTACGATCGTTCTC
CAAGGTTACTAACTTCCTTCAAGACATGTTCGTTCAGAATGAACAAGACACTAGACCCCC
GCAAGAAACAGCAGAGGTTCTCCATCAAGATTCTCTTGAAGCTATTGGAGCAAGCAGAAT
TCAAATAAAGCACGGAAAAGAACAAAGCAATGGATTTGAAGTCATCACCTGTGCCCAACT
TGGTCCCAGGCCTGAAGAGCCCAGAGGCAGTCCAGTTTCATTTGAACTGTTGCAAACCCA
CAAGGATGAAGATGGTAGAATTCATAGAGTGGATGAATTGAAATGGGCCATATTAAAAGG
GGGCATTGAACCAGAATTACGCAAGGAATTGTGGAAATACCTTTTGAAATATTATGAGTG
GAATATGACCCATAAGGAGTTGGTAGAGAGAAGAAAATCTAGAGAGGACGATTACTATCG
TATGAAAATGCAATGGAAGTCGATTGACGAGGAACAACAAAAAAGATTCTCAACTCTTAG
GGAACGAAAATGCCTAATTGATAAAGATGTTATTCGTACCGACCGCACACGAATGTTTTA
TAAGGAAGATGGCAATCTCAGTTTGAAACTGCTCTTTGATATTCTTATGACATACTGCAT
GCACAACTTTGATCTTGGGTATGTACAGGGAATGAGTGATCTGCTTTCTCCATTGCTTGA
AGTCATGGAAAATGAAGTTGATGCATTTTGGTGTTTTGTTGGCTACATGAATCTTGTGCA
TCACAACTTTGAAGCAAACCAGGCAGGAATGAAGCAACAGCTCGGTGACCTCCGTGTTTT
GCTTCAGTTCATGGAACCACAGCTTTGGGACCATTTGCAAGAGAAGGAATCATCGAACCT
CTACTTCTGCTTCCGTTGGTTGCTTATTCATTTCAAACGAGAATTCTCTTATGAAGATAT
CCAGTCAGTGTGGGAGCTTTTGTGGACTGGCCTGCCTTGCTACAACTTCCATCTTTTAAT
ATGCATCGCAATTTTGGAAACCGAAAAGCCTAATCTGATGAAACCGGAATCGTGGACGGA
ACCATCCGCAAGGCCTATGGGATATACAGCCAGCTCTCTGCTTGCAAGCAAGATTTACCA
GACTCCGTTCGACACATTCTCGGGCTTAATGAGTGAGAGGCAAAATCAGCTGGATAACGT
CTCCTTTGGACGAAGCAAACTTTATAATGCTCGTAGCCGCCATGAATCAGTATTAAATCA
GCAATTTACAATTAAACTTTTATACTTCAGTTTCCGAGTTATGCGTCTTAAAAAGGATAA
TATAGCGAATAGTTCTTCCATACTGCTCTGACACTTACTCAGTCATATCTTGTAAAAATA
GCGAACTAGAATATAATTACACTTGTTCTTATGTTGCAATAGTTCATTCTACTGTTGTAT
AGCCATAGACACATTATTTACAGTACATACCGTATCTATATACTAAATACCAAAGACATA
CATGGCTTTATCACTTACAAAATCTATGAAATATTTAGCTTAACTGCCTCGTACAGCTTT
GTTTATCAAATCTACTTCGCTGCTTAATATCAGTGGATTAATACTATACCTATTCTAGTA
TATACACAGAACTACAATAATGAATACAATTCGGTATTTTGGGCAACTATAATACCTTCA
ACCATAATATTGTATTAGTTTTTTCTCTGGTATGGAAATCCTGCTTTTATTGGTAAATGC
TTCTCTTTATTTTGACACATAGTGAATTACTGCCGGCTACGTACCATACTTGAAATTCTA
TTTTATTCTACTGCATCATCAATATTTCTATGTGGTGTTGGTAATTGCTCTCTATGTATA
TATAGATACCCATGTTTTGTTACCGAATCCAACGACTCTGTATAAATAGTGGTTCATTGG
GAGCTTCCCTTACAACTTTTTTGTTCTGTACCAGATTATTGTCATTCGGTGTTGTCGGGA
TTTGCTTACGTTATGCGTCTTGGTGATCTTCATAAATAACGTTTCAATTTGTGGATAGTT
TAAATCATTGGTGACGAATGTGAAGTGAAATACAACATTATACAAAACCATAGTTTGGTA
TTCTTTACCATTATGTGTCAGCTTAAGTGTGGAAGTAAGTGCAGCTATGTTAGTTTATCA
AGATTCAAGAACACAGTTTTGTACGACGACAAATTGTCGCACCACCAAACACGAAAAATC
TATTGATTACTTTACAGGAAACGTATAATTCATGTCAAGACTTGGCGGTAGCGGAGGGCA
CGAAATGTGCTGCTAGTTTTTTTTCCCGGAAATTTGCGGTAATTGCCGATAAAAGTAGCC
CAGAATGCGAGGAAATCGAAATACACAAAAAAGATTCACTCCCAAACTTCATAAAAATTT
CACAACT
| Pfam |
DUF3548 (IPR021935) - T[8-216] 5.2E-27 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[317-508] 2.01E-47 - T[483-572] 1.94E-24 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[335-573] 1.4E-45 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[338-548] 36.172 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[342-570] 2.4E-45 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBC25_HUMAN | 36.546 % | 178 | 1.05E-47 |
| TBC15_HUMAN | 41.908 % | 419 | 4.41E-138 |
| TBC17_HUMAN | 40.035 % | 399 | 1.8E-130 |
