- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g12557.02.t
Possible name(s)
NPTX1; NPTX2; NPTXR
Gene model
Location
S10 [381,735 / 385,703]
Amino acid sequence
Length: 741
>Harore.CG.MTP2014.S10.g12557.02.p
MKNFQLLLLLLLTFCSICYADLTKNVLYLPSFSTPEGGEGKLKKSSSVTNHSPIAWIAGS
VIKRPVKQLSVCLWVKSLNQDATGTLFAYLSKEKRIDFGLVGFQNKKETKESSDETLYQV
YLVVKGKRSKIPISLRLDDVRWHHVCVTWSSRYGQWRVFFDGVKVKYGLGLKRGRTIDPN
GTYFLGGAETQSSIEDGEGIVNGTEDSRVELFASTSFKTSRRKRAIFSPLIQRFVGKITD
LYAWKKTLLKEQIRQIYDCTERFRNKFRNEVSSQLDNIRDLFENTNDGDQNETNKKMSWW
EKNILYAWDVTTLSLRRPARLKQSSNLCGSMVNVECESNYMLITVDKGTFRSYNLGDSRL
HLRNASCIPDEKENHWVFYVRDLTSCGTKRTMSGRDIVFSNEVSNGDPSSPVIYIGRQFS
VAVQCKYPADITASTRQIIPGATPELVGRTTIENPTTKKLDLEAVFVLFEDDKFSKVYHE
KTLLDSNDTVYGGIVVKGIDKRSNENINVVVDSCVMDADQHRIPMLDPTDSCGSITTLLG
NGRIPQVRMRLSASHKTPRKPSYIECGIYPCVGSDCQQPCSQNPISNTVNSGPSNRFVNA
DRHSRKQRAIDEIRDKDTKPKIYYIRIGPIYYKEKHSDFTNQAYTENEAKDISYPIAVIP
CVAVLVILTMAAIFSVFFLSRRTRALQYADVQWDSLGGTVRSRKQPIRANSFIYHQYNPN
IYSINTTNCLKEKTCEQFTEV
Nucleotide sequence
Length: 2,226
>Harore.CG.MTP2014.S10.g12557.02.t
ATGAAGAATTTTCAACTGCTGCTGTTGCTGCTTCTGACGTTTTGCAGTATTTGTTATGCA
GATTTGACAAAGAACGTTTTGTACTTGCCATCGTTTTCTACACCAGAAGGAGGCGAAGGC
AAATTAAAAAAATCTTCCTCCGTAACAAACCATTCACCAATTGCGTGGATAGCGGGAAGC
GTGATAAAGAGACCCGTAAAACAATTGAGCGTATGTCTCTGGGTAAAATCCCTAAATCAA
GATGCGACAGGTACACTCTTCGCTTACTTATCGAAGGAAAAAAGAATCGACTTTGGCCTG
GTTGGATTCCAAAATAAAAAAGAGACTAAAGAGTCCAGCGATGAAACATTATACCAAGTG
TATTTGGTAGTAAAAGGAAAACGATCAAAGATCCCAATATCTCTACGACTAGATGATGTA
AGATGGCATCATGTATGCGTAACGTGGTCATCCAGATACGGGCAATGGAGAGTGTTTTTT
GACGGGGTTAAAGTAAAATATGGTTTGGGACTAAAGCGCGGACGAACCATTGATCCTAAC
GGGACCTACTTCTTAGGAGGGGCGGAGACACAATCATCGATAGAAGACGGTGAAGGAATC
GTAAATGGAACTGAAGATTCGAGGGTGGAACTGTTCGCAAGTACGTCGTTTAAAACATCG
CGAAGAAAACGAGCGATTTTTTCGCCCCTCATTCAAAGATTCGTCGGAAAAATAACGGAC
TTATACGCATGGAAAAAGACTCTATTGAAAGAGCAAATACGACAAATCTACGACTGTACC
GAAAGATTCAGGAATAAATTTAGAAACGAAGTATCTTCCCAGCTAGATAATATTCGAGAT
TTGTTTGAAAATACGAACGATGGGGATCAGAACGAAACAAATAAGAAAATGTCGTGGTGG
GAAAAGAATATTTTATACGCTTGGGACGTTACAACTTTATCACTCCGAAGGCCTGCGCGT
CTGAAGCAATCTAGCAATTTATGTGGATCTATGGTCAATGTGGAATGCGAATCAAATTAC
ATGTTAATAACGGTGGATAAAGGAACTTTCCGTTCCTACAATTTAGGAGATTCTCGACTC
CATTTGCGAAATGCTTCCTGCATACCAGACGAAAAAGAAAACCACTGGGTATTCTACGTA
CGTGATCTAACGTCATGTGGAACGAAGAGAACGATGTCTGGTCGAGATATTGTATTTTCT
AACGAAGTTAGCAACGGCGATCCGAGCAGTCCCGTAATATACATTGGACGACAATTTTCC
GTTGCCGTCCAGTGCAAATATCCAGCTGACATTACAGCGTCAACGAGACAAATTATTCCT
GGAGCAACTCCTGAATTAGTGGGTAGAACTACAATCGAAAATCCGACTACGAAGAAACTT
GACTTAGAAGCGGTATTTGTTCTCTTCGAGGACGACAAATTTTCCAAAGTGTATCACGAA
AAAACTTTACTGGACTCGAACGACACTGTATACGGCGGAATCGTAGTAAAGGGTATTGAC
AAAAGAAGTAATGAAAACATCAATGTGGTCGTTGATAGTTGTGTAATGGACGCTGATCAA
CACAGAATTCCGATGCTAGATCCAACAGACTCTTGTGGATCTATCACAACTCTCTTAGGA
AATGGCCGAATTCCGCAAGTACGAATGAGACTGTCAGCTTCCCATAAAACTCCAAGAAAA
CCTTCGTACATAGAATGTGGAATATATCCATGCGTGGGCTCGGATTGCCAGCAACCTTGT
TCGCAAAATCCAATCTCCAACACAGTCAACTCTGGTCCGAGTAACAGATTTGTCAACGCA
GACAGACATTCAAGAAAACAAAGAGCAATTGATGAGATCAGAGATAAGGACACAAAACCA
AAGATATACTATATTCGAATAGGACCAATATACTACAAAGAGAAACATTCCGACTTCACA
AACCAAGCCTATACAGAAAACGAGGCAAAAGATATTTCCTACCCGATCGCCGTGATACCA
TGCGTAGCTGTCTTAGTCATTCTCACTATGGCCGCGATCTTTTCGGTTTTCTTTCTATCG
CGCAGAACGAGGGCTTTGCAATACGCGGATGTGCAATGGGACTCGTTAGGAGGAACGGTC
AGGAGTAGAAAGCAGCCTATTCGAGCAAATTCATTTATATATCACCAATACAACCCTAAT
ATATATTCGATTAACACAACGAACTGCCTCAAAGAAAAAACATGCGAGCAATTCACAGAA
GTTTAA
| SMART |
Pentraxin-related (IPR001759) - T[19-279] 1.7E-4 |
| ProSiteProfiles |
Pentraxin-related (IPR001759) - T[39-289] 10.97 |
| Pfam |
Pentraxin-related (IPR001759) - T[61-186] 4.1E-7 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[61-191] 4.05E-19 - T[226-261] 4.05E-19 |
| ProSitePatterns |
Pentaxin_CS (IPR030476) - T[144-151] . |
| ProSiteProfiles |
ZP_dom (IPR001507) - T[335-587] 18.052 |
| SMART |
ZP_dom (IPR001507) - T[335-583] 1.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|
