- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.S1266.1.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C14.172.v1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g09462.01.t
Possible name(s)
RPL10A; RSL1D1
Gene model
Location
S10 [366,686 / 368,667]
Amino acid sequence
Length: 216
>Harore.CG.MTP2014.S10.g09462.01.p
MSKVSRDTLYEAAETILAQAKDKPRKFLETVELQISLKNYDPQKDKRFSGTVKLPHIPRE
KYNVCILGDAQHCDEAKANDIPCMDSDALKKLNKDKKLVKKLAKKYNAFLASESLIKQIP
RLLGPGLNKAGKFPTLLTHSESMLSKVKDLKSTIKFQMKKVLCLAVAVGNVSMTDDQLVK
NINLAINFLVSLLKKNWQNVRALYVKSTMGRPQRIY
Nucleotide sequence
Length: 785
>Harore.CG.MTP2014.S10.g09462.01.t
CGAACGTTAATATCGCTACAGCGAAAAGTAGTCCACGTTAGTTTGCATGGGAAATTCTTC
ATTCTTTTCGTGATTTCGACAGTGGATAAGGATGAGTAAGGTATCAAGGGATACGCTGTA
CGAGGCAGCTGAAACCATCCTCGCTCAAGCAAAGGATAAGCCGAGAAAGTTCTTGGAAAC
CGTTGAGTTACAAATTTCTTTGAAGAACTACGATCCCCAGAAGGACAAGAGATTTTCGGG
CACAGTGAAGTTGCCTCACATACCACGAGAAAAATACAATGTCTGCATTCTTGGCGATGC
TCAGCATTGCGATGAGGCCAAAGCAAATGATATACCATGCATGGATTCAGATGCATTGAA
AAAATTGAACAAGGATAAAAAGCTTGTCAAAAAGCTGGCCAAAAAGTACAATGCTTTCCT
CGCTTCCGAGTCTCTTATTAAGCAGATTCCAAGGTTGCTTGGTCCTGGCTTGAACAAAGC
TGGCAAATTTCCAACGCTCCTTACTCATTCAGAATCCATGCTTAGCAAGGTTAAAGACCT
TAAGTCAACCATTAAATTCCAAATGAAGAAAGTCTTGTGTTTGGCTGTCGCAGTCGGCAA
TGTTTCGATGACCGATGATCAGTTGGTGAAGAATATCAATCTTGCTATCAATTTCTTGGT
CTCGCTCTTGAAGAAAAACTGGCAGAATGTCCGTGCTCTGTATGTGAAAAGTACAATGGG
AAGACCGCAACGCATCTATTAAATGTTGTTTTCATAATACAATAAAATAGATTGTGGTCA
AAATG
| PIRSF |
Ribosomal_L1 (IPR002143) - T[1-216] 6.5E-52 |
| SUPERFAMILY |
Ribosomal_L1-like (IPR023674) - T[2-216] 4.32E-70 |
| CDD |
Ribosomal_L1/biogenesis (IPR028364) - T[9-215] 2.38833E-63 |
| Pfam |
Ribosomal_L1/biogenesis (IPR028364) - T[24-210] 1.1E-43 |
| Gene3D |
Ribosomal_L1_3-a/b-sand (IPR016095) - T[62-152] 4.5E-68 |
| ProSitePatterns |
Ribosomal_L1_CS (IPR023673) - T[116-135] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL10A_HUMAN | 80 % | 322 | 2.35E-113 |