- Clone 'AHC0AAA217YM18' >
- Clone 'csga005o11' >
- Clone 'AHC0AAA48YP11' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g06558.02.t
Possible name(s)
CDC6; ORC1; ORC4
Gene model
Location
S10 [646,659 / 648,177]
Amino acid sequence
Length: 505
>Harore.CG.MTP2014.S10.g06558.02.p
MALRSHKKVRREKKSRMTIEQVVDFVSDEDKEDVPPTSSTDDDSLFEIVTKMPPRNNSRL
SARKPSAALISDSKKTTVTPIVLKKPRNKPSTVTETRKSTRTLKVKVNKTTVTPIVIKMP
NDKTPYIRARETPLKLPKTNYEKARQLLHVSSVPDSLPCRETEFQEIYNFVDGKIRTGSG
GCMYVSGVPGTGKTATVREVMASLRQAVDDGDICDFKYIEINGMRLTEPRQAYVQLLRQL
TNEKATADHAANLLTKLFTQRRKNTIVLLADELDLLWTRKQDVLYHLFDWPTYHHARLIV
VAIANTMDLPERILMNRVASRLGLTRLTFKPYNFKQLQEIVATRLQGLRVFDADAIQLVS
RKVAAVSGDARRCLDICRRATEIAMSQSAKLVEIEHVHAALQEMFATPMIQAMRNCSKHE
QIFLQAIVAEFRHSGLEEVTLGRVVDQHCAICQLEGITAVSVSLIVKICYRLANTRLILL
EEGRKDLLARIRLNVSVDDVLFALK
Nucleotide sequence
Length: 1,518
>Harore.CG.MTP2014.S10.g06558.02.t
ATGGCGTTGAGATCGCATAAGAAAGTCAGGAGAGAAAAAAAATCGCGGATGACCATCGAA
CAAGTTGTTGATTTCGTGAGCGATGAAGACAAAGAAGATGTGCCACCTACTTCCTCGACG
GATGACGACAGTCTGTTTGAAATCGTTACTAAGATGCCTCCACGGAACAATTCACGTTTA
TCGGCAAGAAAACCTTCAGCAGCCTTGATTTCTGACTCTAAGAAGACAACAGTTACCCCG
ATTGTTTTGAAGAAACCCCGAAATAAACCATCTACAGTGACTGAAACTAGGAAGTCTACT
AGGACCTTAAAGGTTAAAGTAAATAAAACGACAGTAACTCCTATAGTAATCAAGATGCCA
AATGACAAAACACCATACATTCGAGCCAGAGAGACTCCGCTAAAACTCCCAAAGACAAAC
TATGAAAAAGCAAGACAGCTTCTGCACGTTTCATCTGTGCCTGATTCACTGCCTTGTAGA
GAAACAGAATTTCAAGAAATCTATAACTTTGTAGATGGAAAGATCCGTACCGGCAGTGGT
GGATGTATGTATGTGTCTGGCGTGCCTGGCACTGGGAAAACAGCCACTGTCCGGGAGGTC
ATGGCATCTCTCAGACAAGCCGTGGATGATGGTGACATCTGTGATTTCAAGTACATTGAA
ATCAATGGAATGCGACTCACCGAGCCACGGCAGGCATATGTCCAGTTGTTGCGACAACTT
ACGAATGAAAAAGCAACTGCTGACCATGCGGCAAACCTGCTGACAAAGTTGTTTACCCAG
CGGCGGAAAAACACCATTGTCCTGTTGGCTGATGAACTAGATTTACTATGGACTAGGAAG
CAAGATGTCCTCTACCATCTATTCGACTGGCCCACATATCACCATGCCCGTTTGATTGTG
GTAGCCATAGCTAACACGATGGACCTCCCTGAACGAATACTGATGAACAGGGTGGCAAGT
CGCCTCGGATTGACAAGACTGACTTTCAAGCCTTATAATTTTAAACAGTTGCAAGAAATT
GTTGCAACTCGACTTCAAGGACTTAGGGTATTTGATGCAGACGCCATTCAGTTGGTGTCT
CGTAAGGTCGCCGCTGTTTCGGGGGATGCTAGGCGCTGTCTTGACATTTGCAGAAGGGCC
ACTGAAATAGCCATGTCCCAGTCAGCTAAATTGGTTGAAATAGAACATGTCCACGCTGCA
CTGCAAGAAATGTTTGCCACTCCCATGATTCAAGCCATGAGAAATTGTTCCAAGCATGAA
CAAATTTTCCTCCAAGCCATTGTGGCGGAATTCAGACATTCTGGACTGGAAGAGGTGACC
CTGGGCAGAGTCGTGGATCAGCACTGTGCGATATGTCAGCTAGAAGGAATAACTGCGGTT
TCTGTTTCTTTGATTGTAAAAATCTGTTATCGTTTGGCTAATACTCGACTGATTTTACTC
GAGGAAGGTCGCAAAGATCTGCTTGCTCGAATACGTCTCAATGTCAGTGTTGATGATGTA
TTGTTTGCTCTTAAATAA
| PIRSF |
Cdc6/18 (IPR016314) - T[2-505] 8.7E-86 |
| PANTHER |
ORC1 (IPR020793) - T[28-505] 1.6E-191 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[143-403] 6.34E-39 |
| SMART |
AAA+_ATPase (IPR003593) - T[179-328] 1.0E-7 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[183-324] 6.3E-18 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[409-504] 7.07E-8 |
| CDD |
Cdc6_C (IPR015163) - T[419-500] 3.55988E-15 |
| Pfam |
Cdc6_C (IPR015163) - T[424-503] 7.5E-15 |
| SMART |
Cdc6_C (IPR015163) - T[424-504] 1.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC6_HUMAN | 29.397 % | 176 | 6.83E-49 |
| ORC1_HUMAN | 54.977 % | 467 | 8.19E-157 |
