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TRANSCRIPT CARD

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  1. Molecular Tool 'Hox5-sg1'
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S10.g04452.02.t

Possible name(s)

SLC5A12; SLC5A5; SLC5A8

Location

S10 [414,852 / 416,735]

Sequences

Amino acid sequence

Length: 344

>Harore.CG.MTP2014.S10.g04452.02.p
MYAYYEGCDPTKANIIDKVDQTVPRLVIEVFEDVPGMAGLFVSAALSGTMSTVSSGVNAM
AAMTTEDFIKPHWKTISDRNLTSISKLVSLIFGATVMSVAYAVSVIETTIIQVSMTFIGI
VNGPVLSVFTSGIFVPWSNSKGAITGTVGGWCVAGWVACSSVLHEIPEEFRRTLPLSTES
CNFSSYHTLPEANISRSYESEGSFMSDFTPAVDVLGADNEGDVLARTLYAISPYFLGFFG
FLVAFVLTCLTSVITGRTNPGELDPKLFLPLVDNKILPKPVRTFFRFGVRDLDMEEKKDL
ELNDFALQKKNECGADSNNVPDKIADISSLLPSPQELNVYIESV

Nucleotide sequence

Length: 1,035

>Harore.CG.MTP2014.S10.g04452.02.t
ATGTATGCGTACTACGAAGGATGTGATCCCACAAAAGCAAATATTATCGACAAGGTCGAT
CAAACCGTGCCGCGACTTGTAATTGAAGTGTTTGAAGATGTACCTGGAATGGCTGGATTG
TTTGTTTCTGCCGCTCTCAGTGGAACTATGAGTACTGTTTCTTCGGGTGTAAATGCAATG
GCCGCCATGACAACAGAAGATTTCATTAAACCTCATTGGAAAACTATATCCGATAGGAAT
TTGACCTCAATAAGCAAACTCGTCTCTCTTATCTTCGGAGCCACTGTCATGAGCGTCGCC
TATGCTGTTTCTGTAATAGAAACCACTATAATCCAAGTGTCTATGACGTTTATCGGTATA
GTTAATGGACCTGTACTCAGTGTCTTCACTTCCGGGATTTTTGTTCCATGGTCTAACTCG
AAGGGAGCTATAACGGGCACTGTGGGAGGCTGGTGCGTAGCCGGTTGGGTGGCTTGCTCT
TCGGTTCTACACGAAATTCCGGAAGAATTTCGTAGAACTCTACCACTGTCGACTGAATCT
TGCAACTTTTCTTCCTACCATACGTTGCCTGAAGCAAATATTTCTCGGTCGTACGAGTCA
GAGGGCTCGTTCATGTCGGATTTTACTCCAGCTGTCGACGTTTTGGGAGCCGATAACGAA
GGGGATGTACTGGCAAGGACATTGTACGCAATTTCTCCGTATTTCCTGGGATTTTTCGGA
TTTCTCGTGGCGTTTGTGTTAACATGCCTGACTTCTGTTATTACGGGCAGAACTAATCCA
GGAGAACTGGATCCAAAATTGTTCTTACCCCTGGTGGACAATAAGATTCTCCCGAAACCC
GTGAGAACATTTTTTCGCTTCGGAGTTCGCGATCTCGACATGGAGGAAAAGAAGGATCTT
GAATTGAATGATTTTGCGTTACAGAAAAAAAATGAGTGTGGGGCGGATAGCAATAATGTT
CCGGACAAAATAGCTGATATAAGTAGCCTTTTACCTTCCCCACAGGAGCTCAATGTTTAT
ATAGAAAGTGTGTAA

InterProScan

ProSiteProfiles
Na/solute_symporter (IPR001734) - T[1-164] 17.237
Gene3D
Na/Glc_symporter_sf (IPR038377) - T[1-208] 2.0E-33
Pfam
Na/solute_symporter (IPR001734) - T[18-150] 1.8E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC5A8_HUMAN 35.294 % 156 8.07E-43
SC5AC_HUMAN 33.227 % 154 3.74E-42
SC5A5_HUMAN 35.897 % 160 4.4E-44