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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S5...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S10.g04452.01.t

Possible name(s)

SLC5A12; SLC5A5; SLC5A8

Gene model

Harore.CG.MTP2014.S10.g04452

Location

S10 [414,852 / 419,407]

Sequences

Amino acid sequence

Length: 644

>Harore.CG.MTP2014.S10.g04452.01.p
MALEQFQKYFGLVDFIVLIGLLTGSALIGGYFAYKDRKEKSTDTYLFGGRNMSPIPVAMS
MAVSFVSAITVIGYPVETYLYGLVILWMIPAGMVAATISALYYIPLIFRLNLHTIYQYLE
MRFNKTARKLISGVVLIEFTIYMGITVYLPALGLNAVTPLSLNWTIAITSIVCTFYTVLG
GMKAVIWTDMLQGIIMIFGSLALFVKTLMAIGGFDNLISATQRGERNNFFYFDPDPRIRS
TSFSLFIGMCLISIVGSCCTQIYCQRYMSCRSPKDAKIATFLRVVPVSLFGLLAGANGLA
MYAYYEGCDPTKANIIDKVDQTVPRLVIEVFEDVPGMAGLFVSAALSGTMSTVSSGVNAM
AAMTTEDFIKPHWKTISDRNLTSISKLVSLIFGATVMSVAYAVSVIETTIIQVSMTFIGI
VNGPVLSVFTSGIFVPWSNSKGAITGTVGGWCVAGWVACSSVLHEIPEEFRRTLPLSTES
CNFSSYHTLPEANISRSYESEGSFMSDFTPAVDVLGADNEGDVLARTLYAISPYFLGFFG
FLVAFVLTCLTSVITGRTNPGELDPKLFLPLVDNKILPKPVRTFFRFGVRDLDMEEKKDL
ELNDFALQKKNECGADSNNVPDKIADISSLLPSPQELNVYIESV

Nucleotide sequence

Length: 1,935

>Harore.CG.MTP2014.S10.g04452.01.t
ATGGCGTTAGAACAATTTCAGAAGTATTTCGGCCTTGTGGATTTTATAGTGTTGATTGGT
CTCCTTACAGGTTCTGCGTTGATCGGCGGCTATTTTGCATACAAGGATCGCAAGGAAAAG
TCGACAGATACTTACCTCTTTGGTGGAAGAAATATGTCTCCGATACCTGTTGCCATGTCG
ATGGCTGTCTCTTTCGTCTCCGCTATTACGGTGATCGGTTATCCCGTAGAAACCTATCTA
TATGGACTGGTAATCTTATGGATGATACCGGCAGGCATGGTTGCAGCTACTATCAGCGCC
CTTTATTATATTCCGCTAATCTTTAGACTGAATCTACACACAATTTACCAGTACCTAGAG
ATGCGCTTCAACAAAACGGCCAGAAAGCTTATTTCGGGAGTTGTGCTGATAGAATTTACC
ATTTATATGGGAATAACTGTTTATTTGCCTGCTCTTGGATTGAATGCTGTGACTCCGCTA
AGTCTTAACTGGACCATTGCTATAACAAGCATTGTTTGCACTTTTTATACCGTCTTGGGT
GGAATGAAAGCAGTCATCTGGACCGATATGCTCCAAGGAATAATTATGATATTCGGTTCA
CTTGCATTATTTGTCAAAACCCTTATGGCCATTGGTGGATTCGATAACCTGATATCGGCA
ACCCAAAGAGGGGAACGAAATAATTTTTTCTATTTTGACCCAGACCCAAGAATACGTAGC
ACAAGTTTTTCCTTATTTATCGGCATGTGTTTGATTTCCATCGTTGGGTCGTGTTGTACA
CAGATCTATTGTCAAAGGTACATGTCCTGCAGATCACCAAAAGATGCCAAGATAGCAACG
TTCCTTCGAGTCGTTCCGGTTTCGTTATTCGGTTTGTTAGCAGGTGCTAACGGTTTGGCA
ATGTATGCGTACTACGAAGGATGTGATCCCACAAAAGCAAATATTATCGACAAGGTCGAT
CAAACCGTGCCGCGACTTGTAATTGAAGTGTTTGAAGATGTACCTGGAATGGCTGGATTG
TTTGTTTCTGCCGCTCTCAGTGGAACTATGAGTACTGTTTCTTCGGGTGTAAATGCAATG
GCCGCCATGACAACAGAAGATTTCATTAAACCTCATTGGAAAACTATATCCGATAGGAAT
TTGACCTCAATAAGCAAACTCGTCTCTCTTATCTTCGGAGCCACTGTCATGAGCGTCGCC
TATGCTGTTTCTGTAATAGAAACCACTATAATCCAAGTGTCTATGACGTTTATCGGTATA
GTTAATGGACCTGTACTCAGTGTCTTCACTTCCGGGATTTTTGTTCCATGGTCTAACTCG
AAGGGAGCTATAACGGGCACTGTGGGAGGCTGGTGCGTAGCCGGTTGGGTGGCTTGCTCT
TCGGTTCTACACGAAATTCCGGAAGAATTTCGTAGAACTCTACCACTGTCGACTGAATCT
TGCAACTTTTCTTCCTACCATACGTTGCCTGAAGCAAATATTTCTCGGTCGTACGAGTCA
GAGGGCTCGTTCATGTCGGATTTTACTCCAGCTGTCGACGTTTTGGGAGCCGATAACGAA
GGGGATGTACTGGCAAGGACATTGTACGCAATTTCTCCGTATTTCCTGGGATTTTTCGGA
TTTCTCGTGGCGTTTGTGTTAACATGCCTGACTTCTGTTATTACGGGCAGAACTAATCCA
GGAGAACTGGATCCAAAATTGTTCTTACCCCTGGTGGACAATAAGATTCTCCCGAAACCC
GTGAGAACATTTTTTCGCTTCGGAGTTCGCGATCTCGACATGGAGGAAAAGAAGGATCTT
GAATTGAATGATTTTGCGTTACAGAAAAAAAATGAGTGTGGGGCGGATAGCAATAATGTT
CCGGACAAAATAGCTGATATAAGTAGCCTTTTACCTTCCCCACAGGAGCTCAATGTTTAT
ATAGAAAGTGTGTAA

InterProScan

ProSiteProfiles
Na/solute_symporter (IPR001734) - T[11-464] 50.654
Gene3D
Na/Glc_symporter_sf (IPR038377) - T[33-508] 2.4E-109
Pfam
Na/solute_symporter (IPR001734) - T[45-450] 3.7E-45
TIGRFAM
Na/solute_symporter (IPR001734) - T[45-450] 7.0E-83

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC5A8_HUMAN 35.073 % 342 1.55E-109
SC5AC_HUMAN 33.228 % 344 3.63E-110
SC5A5_HUMAN 35.816 % 353 3.35E-113