- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g03448.01.t
Possible name(s)
E2F2; E2F3
Gene model
Location
S10 [581,105 / 585,691]
Amino acid sequence
Length: 546
>Harore.CG.MTP2014.S10.g03448.01.p
MCRRYLITCNSERGNVIMQSPEPRVFSATNARKNLIINLESLNPNSWNDSTSSFSDNSLM
IELSSDNSNDKFEIKSRTRMFHQEHQPIYPNQPYPSCTGTSFKTPLKHSYRNARHSKKWQ
ATTPGKSPSEKTRYDTSLGLLTKRFVELMHESADGVLDLNYAAEQLAVQKRRIYDITNVL
EGIKLIEKRSKNNVQWVNPTQGMGLNSPNEKTIHKFREEIQYLRKIEDEITQLINHRQVE
LEHLSESNSQHSYVTYQDIRGITSFKDQIVICIKAPQDTKLEVPDPGEKIQILLKSTRGE
IDVFLCPDPMDVANPEEASSPSSIESLEDDLLSPDSETCTGISKENLSSPLMRSHRYQSP
LVADQNISHTLKEGQCLLQQTEDQLEITSEEDSGIVDSSGTSFLIPLSPALDETAYLFGL
DDSEPISDLFDIATSDSASSSSNSTLYIPSIFFSIDLSDHLRHLRFNANHTTIDYCLSHC
WFLSSLINNFSAIRCLDSHFFPSHSLYTATRISKSNVIIISKLSFYPLPCGKYLDCAVTA
LGIKSS
Nucleotide sequence
Length: 2,148
>Harore.CG.MTP2014.S10.g03448.01.t
ATGTGCAGGCGTTATCTGATAACGTGTAATTCAGAACGTGGGAACGTCATAATGCAGTCG
CCTGAACCACGAGTTTTTTCAGCCACCAACGCAAGAAAGAATCTTATAATTAACTTGGAA
TCACTGAATCCAAACAGCTGGAATGACAGTACGTCATCATTTTCAGACAATTCACTGATG
ATAGAGCTATCAAGCGACAACTCAAATGATAAATTTGAAATAAAATCCAGAACACGAATG
TTTCATCAGGAACATCAGCCTATATATCCAAACCAGCCATATCCCAGTTGTACAGGAACG
TCTTTCAAAACTCCACTCAAGCATTCATATAGAAATGCACGTCACTCAAAGAAATGGCAG
GCCACTACTCCAGGAAAATCACCTTCAGAGAAGACCCGTTACGATACATCTTTAGGACTA
TTAACAAAGAGATTTGTCGAACTCATGCATGAGAGCGCTGACGGAGTTTTAGATTTAAAT
TATGCTGCAGAACAACTCGCTGTTCAGAAACGACGGATATACGACATCACAAATGTTTTG
GAGGGAATTAAACTCATTGAAAAACGGTCTAAAAATAATGTTCAGTGGGTTAATCCAACA
CAAGGAATGGGCCTGAATTCACCAAACGAAAAAACAATTCACAAATTCAGAGAAGAGATA
CAATATCTTCGTAAAATTGAAGACGAAATCACACAGTTAATAAACCACCGACAAGTTGAG
CTGGAACATCTGTCAGAATCGAATTCACAGCATTCATATGTAACTTATCAAGACATTCGG
GGCATAACTAGTTTCAAGGATCAAATTGTCATTTGCATCAAGGCGCCACAAGACACTAAA
TTAGAAGTGCCAGACCCTGGAGAGAAAATCCAAATACTCCTCAAAAGTACCAGGGGAGAA
ATCGATGTGTTTTTATGTCCCGATCCCATGGATGTTGCTAACCCTGAAGAAGCGAGTTCT
CCTTCGTCTATTGAGAGCCTAGAGGATGATCTTCTTTCTCCAGATTCAGAAACTTGTACA
GGGATATCAAAAGAGAATTTGTCATCTCCCTTGATGCGTTCCCATCGATATCAATCCCCA
TTGGTCGCTGACCAGAACATTTCACACACATTGAAGGAAGGTCAGTGCCTCCTGCAGCAA
ACAGAAGACCAACTGGAAATCACAAGCGAAGAGGACTCTGGCATTGTTGATTCGTCTGGC
ACGTCCTTTCTGATACCTCTTTCCCCAGCTCTAGATGAAACCGCATATCTGTTTGGACTA
GATGACAGCGAACCGATCAGTGACCTTTTTGACATAGCCACGAGCGATAGTGCTTCGTCA
TCCTCGAACAGCACCTTGTACATACCCAGCATATTTTTCAGCATTGATTTGTCTGACCAT
TTGAGACACCTGAGATTTAATGCCAATCATACAACGATAGATTACTGCCTTTCTCATTGT
TGGTTTCTATCTTCACTGATCAACAATTTTAGTGCCATCCGATGCCTTGACAGCCACTTC
TTCCCATCGCACTCCTTATATACTGCCACTAGAATTTCTAAATCAAATGTGATCATTATC
TCTAAACTGTCATTTTATCCCTTGCCTTGTGGAAAATATCTTGATTGTGCGGTGACAGCA
TTAGGCATAAAATCGTCTTGACAATTATATATGGTATTTCAATACTAGCGTTTCGCTAAT
GACAATTATTGGGTTGCGTTTTTTTCAGCATATTATTTCCATCGCCTTAGTAAGAAGATA
CAGTGGAACGTTAACCATTAATCACTGGAAGTGCATAATATTGAAAACATTTTTTCAGTG
TTTATGTGTGCATCATATTCTCATTTAACTGAGCAATCTACAGTTATCATATGAAATCTT
TACGTCATTTATTATTCAGAGGTCAAAGGAACCATGTTGATCCTGTCATTTATGTATGTT
GCACCTTCAAATAAACCGAAAGATAGCGATCATTTACGCATTTCATTGAACAAAGGTTCT
CCCTTGTAGCATTCCGACCAGCAGTCATTCTGATAACAGCTCTTTATTCGTTTCCCTCTA
GACAAGATAAGAAATGGCTTCAGGCAGTATGTGCACTCTACTTAGGGTAATTATGGGCCA
AATCTTCGCAATACCGAGGCAAAGCATACTCTCTGGTACCATAATGTT
| PANTHER |
E2F (IPR015633) - T[123-432] 3.9E-89 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[127-199] 1.1E-27 |
| SMART |
E2F_WHTH_DNA-bd_dom (IPR003316) - T[133-198] 1.3E-32 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[133-197] 4.72E-17 |
| Pfam |
E2F_WHTH_DNA-bd_dom (IPR003316) - T[135-197] 5.7E-24 |
| SUPERFAMILY |
E2F-DP_heterodim (IPR037241) - T[214-308] 4.97E-27 |
| CDD |
E2F_CC-MB (IPR032198) - T[215-308] 1.18601E-38 |
| Pfam |
E2F_CC-MB (IPR032198) - T[217-307] 4.5E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| E2F3_HUMAN | 43.391 % | 209 | 1.43E-61 |
| E2F2_HUMAN | 44.828 % | 227 | 1.33E-68 |
| E2F1_HUMAN | 37.534 % | 186 | 3.83E-53 |