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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S10.g02631.01.t

Possible name(s)

UFD1

Location

S10 [648,446 / 652,200]

Sequences

Amino acid sequence

Length: 334

>Harore.CG.MTP2014.S10.g02631.01.p
IVYHRREIIKYLVICKNKEPNMFGFRNMYNEMAPIRQRLMSFNTHYKCYSILMLPGAERE
DVERGGKIIMPPSALDQLSRLNISYPMLFKLTNQKTSRTTHCGVLEFVADEGKIYLPYWM
MQNLCVNEGDLVGVSNCTLPVATYSRFQPQSPDFLDISNPKAVLENALRNFACLSKDDVI
SIQYNSKKYELCVLEVKPGDAVSIIECDMSVEFAAPVGYQPPEFKKEQTEEDHAIGTPDV
KKALEEYVQENKGFLAFHGQGSRLDGKKKHTEGLKMDLKLNELQRGVPNYNWEKGTLKYI
RCNEPPKESQLETSSNEFTAFFGQGNALRKKKKR

Nucleotide sequence

Length: 1,391

>Harore.CG.MTP2014.S10.g02631.01.t
AGATTGTTTATCATAGAAGAGAAATAATTAAATATCTTGTTATTTGTAAGAATAAGGAAC
CAAATATGTTTGGATTCAGAAATATGTACAATGAAATGGCACCAATTCGTCAGCGGCTGA
TGTCTTTTAACACCCATTACAAGTGTTATTCCATACTTATGCTCCCTGGTGCAGAAAGAG
AAGATGTAGAGAGGGGGGGTAAAATTATTATGCCTCCCTCGGCGCTTGATCAGCTAAGCA
GGTTGAACATATCGTATCCCATGTTATTCAAGTTAACAAACCAGAAAACCAGTCGAACTA
CGCACTGTGGAGTTTTAGAGTTTGTCGCAGATGAAGGAAAAATATATTTGCCGTACTGGA
TGATGCAGAACCTTTGCGTCAATGAAGGTGACCTCGTTGGCGTTTCAAACTGCACTTTGC
CTGTTGCAACGTATTCTCGTTTTCAGCCGCAGTCACCAGATTTTTTGGACATTTCGAATC
CAAAGGCTGTACTTGAGAATGCTCTAAGAAATTTTGCATGCCTGTCAAAAGATGATGTGA
TATCAATACAATATAACAGCAAAAAATACGAGCTCTGTGTGTTAGAAGTTAAACCAGGCG
ATGCAGTTTCAATCATCGAATGCGATATGAGTGTGGAATTCGCTGCTCCGGTAGGATATC
AGCCTCCCGAATTTAAGAAGGAACAAACCGAAGAGGACCATGCCATTGGGACTCCTGATG
TTAAGAAAGCTTTGGAAGAATATGTGCAAGAAAATAAAGGTTTTCTAGCATTTCATGGAC
AAGGAAGCAGACTTGATGGAAAGAAAAAGCATACAGAAGGACTGAAAATGGACTTAAAAT
TGAATGAATTGCAACGTGGTGTTCCTAATTACAACTGGGAAAAGGGCACACTAAAATATA
TAAGATGTAACGAACCTCCCAAAGAAAGTCAACTGGAAACAAGTTCTAACGAGTTCACTG
CTTTTTTCGGGCAGGGTAACGCTTTACGTAAAAAGAAAAAAAGATGATGAGAGTCTCACT
ATTTACACACGCGAATACATTTCTTTAATACCTTTAATATCTTTGAAATTTTATTTAAGA
AACTGTTCCAGTTCCAGAGAAATCAAAGATAACCATAAAATGCTGTTAAGTACTTTGTCA
ATTTTTAATGTTGGTCCTTTGTGGTTGTGCAAAAGACTAATAAATTTAAGTTGAGCATAG
GGCATGCGGATTGAATATGGGAGGTTCAGTAAGCATTTCATGGACAAGGAAGCAGACTTG
ATGGAAAGAAAAAGCATACAGAAGGACTGAAAATGGACTTAAAATTGAATGAATTGCAAC
GTGGTGTTCCTAATTACAACTGGGAAAAGGGCACACTAAAATATATAAGATGTAACGAAC
CTCCCAAAGAA

InterProScan

PANTHER
Ufd1-like (IPR004854) - T[36-318] 9.5E-101
Pfam
Ufd1-like (IPR004854) - T[42-216] 1.4E-77

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UFD1_HUMAN 56.19 % 338 3.16E-116