- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g00327.01.t
Possible name(s)
CSMD2; PAMR1; PRSS55
Gene model
Location
S10 [409,609 / 411,926]
Amino acid sequence
Length: 631
>Harore.CG.MTP2014.S10.g00327.01.p
MIIIIALSLLLFLSATSCPALPPLFGGRIRLGLGLDVNTTMMFVNSSLSNFDAFNLIPVG
SKAAYECIGGFVLSERATRVCMEGGRWSGVQPVCVKGCKDPGKPSHSRMISWIGIEATPE
EQRRTSEVLKARQKHSRLPVGTVLTFECISEKFFMRGIPRRVCMANGKWSTSENPYCLPR
CGAFPGVSSKTIYRKATADSLTATSWPWHVVIKRQLREADEQRVQCGGAYIGNNLVITVA
QCVTFSSTVLPFQPHQIQVGLGVNIDDDVMYTHDVLEIIIHSDFDPIVHDYDIALLVLSN
EVKLDAKGRLWPVCISGDNEYLAPSGAVEVENDFNSSIYYTPYSTDLVHWLSGKKGLHLH
GQEHHHHLAEGNENEFILGPTTPSSSDVINVDGSVIGSDLNDAKKIAGNATALLNKQYST
TPSTKQSQTVEMNNREHVGLKHTHEKVEYFNVTREPNSKCERVFLENLVSSRMICGLQAI
VKSGKTVDDRCYERRGNPLVVYRSVRYTKQGRRRRHKRRSKQRYSKCTSHARRPRSVVGS
NEAPADKKSVLKLENELIADKPAKHAEIKSKSDLPKQVWLLEGLSSWTARGSCIEHPLNR
YTVFVKVRAFAEWIALKRKELQEKGLLLPPA
Nucleotide sequence
Length: 1,896
>Harore.CG.MTP2014.S10.g00327.01.t
ATGATCATTATTATTGCACTAAGTCTTCTTTTATTCTTGTCAGCAACATCATGTCCAGCT
CTTCCACCATTATTCGGTGGACGCATTCGTTTGGGTCTCGGATTGGACGTAAATACGACA
ATGATGTTTGTCAATTCCTCGTTGTCCAACTTCGACGCATTCAATTTAATACCGGTCGGA
TCTAAAGCAGCATACGAATGCATTGGTGGATTTGTGTTAAGTGAGCGTGCCACTCGCGTT
TGTATGGAGGGTGGTCGATGGAGTGGAGTACAACCAGTATGTGTCAAAGGATGTAAGGAT
CCTGGAAAGCCCAGCCATTCCAGGATGATATCTTGGATCGGGATAGAAGCTACTCCGGAA
GAACAGCGAAGAACCTCTGAGGTCTTGAAAGCGAGGCAGAAGCACAGTCGATTACCTGTT
GGCACAGTTCTCACTTTCGAATGTATCAGTGAGAAGTTTTTCATGCGCGGTATACCGAGG
CGTGTGTGCATGGCGAATGGAAAATGGAGTACTTCTGAAAATCCGTATTGCTTGCCGAGA
TGCGGTGCGTTTCCTGGTGTTTCATCCAAAACAATTTATCGCAAAGCAACAGCTGATTCA
TTAACAGCGACGTCATGGCCTTGGCATGTCGTAATTAAAAGACAATTACGCGAAGCAGAC
GAACAAAGAGTTCAGTGTGGAGGAGCGTATATAGGGAATAATTTGGTAATCACCGTTGCC
CAATGCGTAACTTTCTCTTCAACCGTTCTCCCTTTTCAACCTCATCAAATTCAAGTCGGT
CTGGGTGTGAATATCGACGACGACGTGATGTACACACATGATGTTTTAGAGATCATAATA
CACAGTGACTTCGATCCGATAGTCCACGATTACGATATTGCCTTGCTTGTGCTTTCGAAT
GAAGTAAAATTGGATGCGAAAGGGAGACTTTGGCCTGTATGTATATCAGGAGACAATGAA
TACTTGGCTCCAAGTGGTGCAGTCGAAGTAGAAAATGATTTTAATTCATCTATTTACTAT
ACTCCATATTCAACAGATCTCGTACACTGGTTATCGGGGAAAAAGGGATTGCATCTGCAT
GGACAAGAGCACCATCACCATCTGGCCGAAGGAAACGAAAACGAATTTATCCTAGGACCA
ACTACCCCCAGTAGCAGTGACGTAATTAATGTCGATGGTTCCGTTATTGGCAGCGACTTG
AATGATGCTAAAAAAATAGCTGGAAATGCGACCGCGTTGCTGAACAAACAATATTCTACC
ACGCCATCAACAAAGCAAAGTCAAACAGTTGAGATGAACAATAGAGAACATGTAGGCTTG
AAGCATACCCATGAAAAAGTGGAGTACTTCAATGTTACTAGGGAACCAAATTCGAAATGC
GAACGTGTTTTCTTGGAAAACCTCGTGTCTTCCAGAATGATCTGTGGATTGCAGGCTATA
GTCAAAAGCGGGAAAACAGTAGACGACAGATGCTACGAGAGGAGAGGGAACCCTTTAGTG
GTTTATAGGTCTGTGCGATATACCAAACAGGGGCGGAGAAGGCGACACAAACGTCGCTCC
AAACAAAGGTATTCTAAATGTACCTCACATGCTCGTCGTCCGCGTAGCGTTGTTGGCAGC
AACGAAGCTCCTGCGGATAAAAAATCAGTTTTAAAATTGGAAAACGAATTAATCGCCGAT
AAACCAGCGAAACACGCAGAAATAAAAAGCAAAAGTGACTTGCCCAAACAAGTTTGGCTG
CTCGAGGGCCTCAGCAGTTGGACTGCTAGAGGGAGTTGTATAGAACATCCGCTCAACAGG
TATACGGTTTTCGTAAAAGTTCGCGCGTTTGCGGAATGGATCGCTTTGAAAAGAAAGGAG
TTGCAAGAAAAAGGACTTTTACTACCACCGGCATGA
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[16-96] 8.903 - T[116-179] 7.961 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[18-94] 0.0032 - T[123-177] 1.1 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[18-95] 1.02277E-8 - T[136-177] 4.57164E-6 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[43-102] 8.48E-11 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[57-94] 1.8E-5 - T[134-177] 1.9E-4 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[160-321] 1.62E-24 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[192-619] 14.66 |
| SMART |
Trypsin_dom (IPR001254) - T[195-614] 9.5E-5 |
| Pfam |
Trypsin_dom (IPR001254) - T[202-317] 5.6E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAMR1_HUMAN | 28.082 % | 117 | 2.79E-27 |